# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj03652.fasta.huge -Q ../query/FLJ00332.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 FLJ00332, 201 aa
 vs ./tmplib.10216 library

2210793 residues in  2457 sequences
  Expectation_n fit: rho(ln(x))= 3.9919+/-0.00421; mu= 17.9595+/- 0.284
 mean_var=97.3707+/-20.736, 0's: 0 Z-trim: 12  B-trim: 0 in 0/40
 Lambda= 0.129975

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2457)
FLJ00288  ( 217 res)   sh02579                     ( 217)  263 58.2 3.3e-10
KIAA1055  ( 868 res)   hh09512                     ( 868)  152 38.3  0.0013
KIAA1322  ( 702 res)   fh13826                     ( 702)  149 37.6  0.0017
KIAA1108  ( 763 res)   hh03387s1                   ( 763)  138 35.6  0.0072
KIAA0608  ( 775 res)   hh00889b                    ( 775)  137 35.4  0.0083
FLJ00006  ( 401 res)   as00006                     ( 401)  130 33.7   0.015
KIAA0676  ( 1262 res)   hk02596                    (1262)  133 35.0   0.018
KIAA0882  ( 1291 res)   hk07544s1                  (1291)  128 34.1   0.035
KIAA0019  ( 838 res)   ha00537                     ( 838)  125 33.2   0.041
KIAA0210  ( 801 res)   ha02313                     ( 801)  122 32.6   0.059
KIAA0603  ( 1348 res)   hg01488b                   (1348)  123 33.2   0.068
KIAA0984  ( 728 res)   hj07670                     ( 728)  115 31.3    0.14
KIAA1741  ( 1777 res)   fh23254                    (1777)  102 29.4     1.2
KIAA1849  ( 1114 res)   fg05386(revised)           (1114)  100 28.7     1.2
KIAA0347  ( 1281 res)   hg01528(revised)           (1281)   94 27.7     2.9
FLJ00263  ( 764 res)   sj01530                     ( 764)   90 26.6     3.7
FLJ00083  ( 216 res)   as00083                     ( 216)   80 23.8     7.1
KIAA1720  ( 421 res)   pf00447                     ( 421)   81 24.5     8.8
KIAA0293  ( 1505 res)   hg03205                    (1505)   86 26.3     8.9
KIAA1816  ( 1162 res)   fh16716                    (1162)   84 25.8      10
KIAA0275  ( 510 res)   ha06214                     ( 510)   80 24.4      11
KIAA0239  ( 849 res)   ha06313                     ( 849)   82 25.2      11
KIAA0841  ( 641 res)   hk04975                     ( 641)   80 24.6      12
KIAA0410  ( 505 res)   hg01877                     ( 505)   78 24.1      14
FLJ00252  ( 819 res)   sj09394                     ( 819)   79 24.6      16
KIAA1200  ( 1403 res)   fg02656                    (1403)   81 25.3      16
FLJ00163  ( 521 res)   sh06933                     ( 521)   77 23.9      16
KIAA0759  ( 673 res)   hk04621                     ( 673)   78 24.3      17
KIAA0208  ( 748 res)   ha02713                     ( 748)   77 24.1      20
KIAA0324  ( 2800 res)   ee08846s1                  (2800)   82 26.0      21
KIAA0896  ( 2820 res)   hk08890s2                  (2820)   82 26.0      21
FLJ00248  ( 501 res)   sj08681                     ( 501)   75 23.5      21
KIAA1862  ( 1070 res)   aj00563                    (1070)   78 24.6      21
KIAA1045  ( 427 res)   hh00656                     ( 427)   74 23.2      22
KIAA0093  ( 927 res)   ha00935                     ( 927)   77 24.3      22
KIAA1865  ( 723 res)   fj14303                     ( 723)   76 23.9      22
KIAA0284  ( 1573 res)   pf09542                    (1573)   79 25.0      23
FLJ00031  ( 188 res)   as00031                     ( 188)   70 21.9      24
KIAA0749  ( 678 res)   hk04328                     ( 678)   75 23.7      24
KIAA0770  ( 913 res)   hk05040s1                   ( 913)   76 24.1      25
KIAA1284  ( 953 res)   hh09454s1                   ( 953)   76 24.1      26
KIAA1171  ( 595 res)   hh05501s1                   ( 595)   74 23.4      26
KIAA0422  ( 1160 res)   hh01205s1                  (1160)   76 24.3      28
KIAA1545  ( 968 res)   fj14026s1                   ( 968)   75 24.0      29
FLJ00220  ( 503 res)   sj05828                     ( 503)   72 22.9      31
KIAA0377  ( 1412 res)   hh00412                    (1412)   76 24.4      31
KIAA0721  ( 433 res)   hk01908                     ( 433)   71 22.6      32
KIAA0450  ( 1182 res)   hj05822                    (1182)   75 24.1      32
FLJ00216  ( 270 res)   sj05401                     ( 270)   69 21.9      33
KIAA0514  ( 483 res)   hf00310                     ( 483)   71 22.7      34


>>FLJ00288  ( 217 res)   sh02579                          (217 aa)
 initn: 263 init1: 263 opt: 263  Z-score: 276.6  bits: 58.2 E(): 3.3e-10
Smith-Waterman score: 263;  51.562% identity (84.375% similar) in 64 aa overlap (6-69:97-160)

                                        10        20        30     
FLJ003                          WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGV
                                     ::..::.:....::... : .::::..  .
FLJ002 LLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI
         70        80        90       100       110       120      

          40        50        60        70        80        90     
FLJ003 GPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSL
        ::::. :::.: :.:.::. .:::::: :. ::                          
FLJ002 DPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLGLGGAPLSPAAHSGASLCRETPK
        130       140       150       160       170       180      

         100       110       120       130       140       150     
FLJ003 FEPQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELL
                                                                   
FLJ002 SFLVLTAHPPCRGQDHLPGGAGAAEARAGLP                             
        190       200       210                                    

>>KIAA1055  ( 868 res)   hh09512                          (868 aa)
 initn: 152 init1: 152 opt: 152  Z-score: 158.5  bits: 38.3 E(): 0.0013
Smith-Waterman score: 152;  36.066% identity (65.574% similar) in 61 aa overlap (9-69:750-810)

                                     10        20        30        
FLJ003                       WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPL
                                     ..: .::  :. . ::..: :..:  :   
KIAA10 LEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYT
     720       730       740       750       760       770         

       40        50        60        70        80        90        
FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP
       :   .::: .:. :.    ....::.:: ::                             
KIAA10 LITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIF
     780       790       800       810       820       830         

      100       110       120       130       140       150        
FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS
                                                                   
KIAA10 KYLRYFTRTILDARSGTDAPTTWRKSGWS                               
     840       850       860                                       

>>KIAA1322  ( 702 res)   fh13826                          (702 aa)
 initn: 149 init1: 149 opt: 149  Z-score: 156.3  bits: 37.6 E(): 0.0017
Smith-Waterman score: 149;  32.143% identity (75.000% similar) in 56 aa overlap (15-70:566-621)

                               10        20        30        40    
FLJ003                 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW
                                     : ..... ::..  :... .. : .:: .:
KIAA13 FIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDW
         540       550       560       570       580       590     

           50        60        70        80        90       100    
FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG
       .. :...:::.  . :.::.:  .::                                  
KIAA13 IFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLP
         600       610       620       630       640       650     

>>KIAA1108  ( 763 res)   hh03387s1                        (763 aa)
 initn: 124 init1: 124 opt: 138  Z-score: 144.8  bits: 35.6 E(): 0.0072
Smith-Waterman score: 138;  37.705% identity (60.656% similar) in 61 aa overlap (13-69:529-589)

                                 10        20            30        
FLJ003                   WTWPQEAVRLDAEVFMALLRRLLPHVHK----HLQQVGVGPL
                                     .. :  : :::   :.    ::..  .:: 
KIAA11 MSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPS
      500       510       520       530       540       550        

       40        50        60        70        80        90        
FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP
       ::   ::: .:: ..:.  : ::.: .. .:                             
KIAA11 LYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIV
      560       570       580       590       600       610        

      100       110       120       130       140       150        
FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS
                                                                   
KIAA11 DFIKSTLPNLGLVQMEKTINQVFEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKL
      620       630       640       650       660       670        

>>KIAA0608  ( 775 res)   hh00889b                         (775 aa)
 initn: 137 init1: 137 opt: 137  Z-score: 143.7  bits: 35.4 E(): 0.0083
Smith-Waterman score: 137;  32.143% identity (73.214% similar) in 56 aa overlap (15-70:638-693)

                               10        20        30        40    
FLJ003                 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW
                                     : ..... : ..  :... .. : .:: .:
KIAA06 FIAFANLLNKPCQLAFFRVDHSMMLKYFATFEVFFEENLSKLFLHFKSYSLTPDIYLIDW
       610       620       630       640       650       660       

           50        60        70        80        90       100    
FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG
       .. :...:::.  . ::::.:  .::                                  
KIAA06 IFTLYSKSLPLDLACRVWDVFCRDGEEFLFRTGLGILRLYEDILLQMDFIHIAQFLTKLP
       670       680       690       700       710       720       

>>FLJ00006  ( 401 res)   as00006                          (401 aa)
 initn: 130 init1: 130 opt: 130  Z-score: 139.3  bits: 33.7 E(): 0.015
Smith-Waterman score: 130;  35.484% identity (59.677% similar) in 62 aa overlap (8-69:188-249)

                                      10        20        30       
FLJ003                        WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGP
                                     :. : .:.  :. . ::.. : ::.  .  
FLJ000 FLEEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIEL
       160       170       180       190       200       210       

        40        50        60        70        80        90       
FLJ003 LLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFE
        :   .:::  ::  . .  .::.:: :. ::                            
FLJ000 SLITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASI
       220       230       240       250       260       270       

       100       110       120       130       140       150       
FLJ003 PQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRD
                                                                   
FLJ000 FNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNL
       280       290       300       310       320       330       

>>KIAA0676  ( 1262 res)   hk02596                         (1262 aa)
 initn: 142 init1:  84 opt: 133  Z-score: 137.7  bits: 35.0 E(): 0.018
Smith-Waterman score: 133;  35.000% identity (63.333% similar) in 60 aa overlap (10-69:649-707)

                                    10        20        30         
FLJ003                      WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL
                                     .:  .:  : : .::.. ...:..::   .
KIAA06 GSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISSI
      620       630       640       650       660       670        

      40        50        60        70        80        90         
FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ
        :  ::: ::   .:: ... . : :. ::                              
KIAA06 SLS-WFLTLFLSVMPFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLGCSDEGEAMT
      680        690       700       710       720       730       

>>KIAA0882  ( 1291 res)   hk07544s1                       (1291 aa)
 initn:  85 init1:  85 opt: 128  Z-score: 132.5  bits: 34.1 E(): 0.035
Smith-Waterman score: 128;  36.667% identity (60.000% similar) in 60 aa overlap (10-69:669-727)

                                    10        20        30         
FLJ003                      WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL
                                     .:  ::  : :  .:...  .:..::   .
KIAA08 AKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTI
      640       650       660       670       680       690        

      40        50        60        70        80        90         
FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ
        :  ::: ::   .:: ... : : :. ::                              
KIAA08 SLS-WFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMT
      700        710       720       730       740       750       

>>KIAA0019  ( 838 res)   ha00537                          (838 aa)
 initn: 153 init1: 124 opt: 125  Z-score: 131.2  bits: 33.2 E(): 0.041
Smith-Waterman score: 125;  33.333% identity (68.519% similar) in 54 aa overlap (18-70:251-303)

                            10        20        30        40       
FLJ003              WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFL-
                                     .: ..: ....::..  .   .:  .::. 
KIAA00 KLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQ
              230       240       250       260       270       280

         50        60        70        80        90       100      
FLJ003 CLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVP
       :.. :. ::   ::.:: .. :::                                    
KIAA00 CFLDRT-PFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAK
               290       300       310       320       330         

>>KIAA0210  ( 801 res)   ha02313                          (801 aa)
 initn: 122 init1: 122 opt: 122  Z-score: 128.4  bits: 32.6 E(): 0.059
Smith-Waterman score: 122;  32.692% identity (71.154% similar) in 52 aa overlap (18-69:314-365)

                            10        20        30        40       
FLJ003              WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFLC
                                     ::..   ... ::... ..: .:  .:   
KIAA02 TLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRL
           290       300       310       320       330       340   

        50        60        70        80        90       100       
FLJ003 LFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVPK
       ::.: .:.  .: ::::....:                                      
KIAA02 LFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPF
           350       360       370       380       390       400   




201 residues in 1 query   sequences
2210793 residues in 2457 library sequences
 Tcomplib [34.26] (2 proc)
 start: Fri Feb 27 10:51:53 2009 done: Fri Feb 27 10:51:53 2009
 Total Scan time:  0.370 Total Display time:  0.030

Function used was FASTA [version 34.26.5 April 26, 2007]