# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj03652.fasta.huge -Q ../query/FLJ00332.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00332, 201 aa
vs ./tmplib.10216 library
2210793 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.9919+/-0.00421; mu= 17.9595+/- 0.284
mean_var=97.3707+/-20.736, 0's: 0 Z-trim: 12 B-trim: 0 in 0/40
Lambda= 0.129975
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
FLJ00288 ( 217 res) sh02579 ( 217) 263 58.2 3.3e-10
KIAA1055 ( 868 res) hh09512 ( 868) 152 38.3 0.0013
KIAA1322 ( 702 res) fh13826 ( 702) 149 37.6 0.0017
KIAA1108 ( 763 res) hh03387s1 ( 763) 138 35.6 0.0072
KIAA0608 ( 775 res) hh00889b ( 775) 137 35.4 0.0083
FLJ00006 ( 401 res) as00006 ( 401) 130 33.7 0.015
KIAA0676 ( 1262 res) hk02596 (1262) 133 35.0 0.018
KIAA0882 ( 1291 res) hk07544s1 (1291) 128 34.1 0.035
KIAA0019 ( 838 res) ha00537 ( 838) 125 33.2 0.041
KIAA0210 ( 801 res) ha02313 ( 801) 122 32.6 0.059
KIAA0603 ( 1348 res) hg01488b (1348) 123 33.2 0.068
KIAA0984 ( 728 res) hj07670 ( 728) 115 31.3 0.14
KIAA1741 ( 1777 res) fh23254 (1777) 102 29.4 1.2
KIAA1849 ( 1114 res) fg05386(revised) (1114) 100 28.7 1.2
KIAA0347 ( 1281 res) hg01528(revised) (1281) 94 27.7 2.9
FLJ00263 ( 764 res) sj01530 ( 764) 90 26.6 3.7
FLJ00083 ( 216 res) as00083 ( 216) 80 23.8 7.1
KIAA1720 ( 421 res) pf00447 ( 421) 81 24.5 8.8
KIAA0293 ( 1505 res) hg03205 (1505) 86 26.3 8.9
KIAA1816 ( 1162 res) fh16716 (1162) 84 25.8 10
KIAA0275 ( 510 res) ha06214 ( 510) 80 24.4 11
KIAA0239 ( 849 res) ha06313 ( 849) 82 25.2 11
KIAA0841 ( 641 res) hk04975 ( 641) 80 24.6 12
KIAA0410 ( 505 res) hg01877 ( 505) 78 24.1 14
FLJ00252 ( 819 res) sj09394 ( 819) 79 24.6 16
KIAA1200 ( 1403 res) fg02656 (1403) 81 25.3 16
FLJ00163 ( 521 res) sh06933 ( 521) 77 23.9 16
KIAA0759 ( 673 res) hk04621 ( 673) 78 24.3 17
KIAA0208 ( 748 res) ha02713 ( 748) 77 24.1 20
KIAA0324 ( 2800 res) ee08846s1 (2800) 82 26.0 21
KIAA0896 ( 2820 res) hk08890s2 (2820) 82 26.0 21
FLJ00248 ( 501 res) sj08681 ( 501) 75 23.5 21
KIAA1862 ( 1070 res) aj00563 (1070) 78 24.6 21
KIAA1045 ( 427 res) hh00656 ( 427) 74 23.2 22
KIAA0093 ( 927 res) ha00935 ( 927) 77 24.3 22
KIAA1865 ( 723 res) fj14303 ( 723) 76 23.9 22
KIAA0284 ( 1573 res) pf09542 (1573) 79 25.0 23
FLJ00031 ( 188 res) as00031 ( 188) 70 21.9 24
KIAA0749 ( 678 res) hk04328 ( 678) 75 23.7 24
KIAA0770 ( 913 res) hk05040s1 ( 913) 76 24.1 25
KIAA1284 ( 953 res) hh09454s1 ( 953) 76 24.1 26
KIAA1171 ( 595 res) hh05501s1 ( 595) 74 23.4 26
KIAA0422 ( 1160 res) hh01205s1 (1160) 76 24.3 28
KIAA1545 ( 968 res) fj14026s1 ( 968) 75 24.0 29
FLJ00220 ( 503 res) sj05828 ( 503) 72 22.9 31
KIAA0377 ( 1412 res) hh00412 (1412) 76 24.4 31
KIAA0721 ( 433 res) hk01908 ( 433) 71 22.6 32
KIAA0450 ( 1182 res) hj05822 (1182) 75 24.1 32
FLJ00216 ( 270 res) sj05401 ( 270) 69 21.9 33
KIAA0514 ( 483 res) hf00310 ( 483) 71 22.7 34
>>FLJ00288 ( 217 res) sh02579 (217 aa)
initn: 263 init1: 263 opt: 263 Z-score: 276.6 bits: 58.2 E(): 3.3e-10
Smith-Waterman score: 263; 51.562% identity (84.375% similar) in 64 aa overlap (6-69:97-160)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGV
::..::.:....::... : .::::.. .
FLJ002 LLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI
70 80 90 100 110 120
40 50 60 70 80 90
FLJ003 GPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSL
::::. :::.: :.:.::. .:::::: :. ::
FLJ002 DPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLGLGGAPLSPAAHSGASLCRETPK
130 140 150 160 170 180
100 110 120 130 140 150
FLJ003 FEPQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELL
FLJ002 SFLVLTAHPPCRGQDHLPGGAGAAEARAGLP
190 200 210
>>KIAA1055 ( 868 res) hh09512 (868 aa)
initn: 152 init1: 152 opt: 152 Z-score: 158.5 bits: 38.3 E(): 0.0013
Smith-Waterman score: 152; 36.066% identity (65.574% similar) in 61 aa overlap (9-69:750-810)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPL
..: .:: :. . ::..: :..: :
KIAA10 LEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYT
720 730 740 750 760 770
40 50 60 70 80 90
FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP
: .::: .:. :. ....::.:: ::
KIAA10 LITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIF
780 790 800 810 820 830
100 110 120 130 140 150
FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS
KIAA10 KYLRYFTRTILDARSGTDAPTTWRKSGWS
840 850 860
>>KIAA1322 ( 702 res) fh13826 (702 aa)
initn: 149 init1: 149 opt: 149 Z-score: 156.3 bits: 37.6 E(): 0.0017
Smith-Waterman score: 149; 32.143% identity (75.000% similar) in 56 aa overlap (15-70:566-621)
10 20 30 40
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW
: ..... ::.. :... .. : .:: .:
KIAA13 FIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDW
540 550 560 570 580 590
50 60 70 80 90 100
FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG
.. :...:::. . :.::.: .::
KIAA13 IFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLP
600 610 620 630 640 650
>>KIAA1108 ( 763 res) hh03387s1 (763 aa)
initn: 124 init1: 124 opt: 138 Z-score: 144.8 bits: 35.6 E(): 0.0072
Smith-Waterman score: 138; 37.705% identity (60.656% similar) in 61 aa overlap (13-69:529-589)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHK----HLQQVGVGPL
.. : : ::: :. ::.. .::
KIAA11 MSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPS
500 510 520 530 540 550
40 50 60 70 80 90
FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP
:: ::: .:: ..:. : ::.: .. .:
KIAA11 LYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIV
560 570 580 590 600 610
100 110 120 130 140 150
FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS
KIAA11 DFIKSTLPNLGLVQMEKTINQVFEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKL
620 630 640 650 660 670
>>KIAA0608 ( 775 res) hh00889b (775 aa)
initn: 137 init1: 137 opt: 137 Z-score: 143.7 bits: 35.4 E(): 0.0083
Smith-Waterman score: 137; 32.143% identity (73.214% similar) in 56 aa overlap (15-70:638-693)
10 20 30 40
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW
: ..... : .. :... .. : .:: .:
KIAA06 FIAFANLLNKPCQLAFFRVDHSMMLKYFATFEVFFEENLSKLFLHFKSYSLTPDIYLIDW
610 620 630 640 650 660
50 60 70 80 90 100
FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG
.. :...:::. . ::::.: .::
KIAA06 IFTLYSKSLPLDLACRVWDVFCRDGEEFLFRTGLGILRLYEDILLQMDFIHIAQFLTKLP
670 680 690 700 710 720
>>FLJ00006 ( 401 res) as00006 (401 aa)
initn: 130 init1: 130 opt: 130 Z-score: 139.3 bits: 33.7 E(): 0.015
Smith-Waterman score: 130; 35.484% identity (59.677% similar) in 62 aa overlap (8-69:188-249)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGP
:. : .:. :. . ::.. : ::. .
FLJ000 FLEEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIEL
160 170 180 190 200 210
40 50 60 70 80 90
FLJ003 LLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFE
: .::: :: . . .::.:: :. ::
FLJ000 SLITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASI
220 230 240 250 260 270
100 110 120 130 140 150
FLJ003 PQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRD
FLJ000 FNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNL
280 290 300 310 320 330
>>KIAA0676 ( 1262 res) hk02596 (1262 aa)
initn: 142 init1: 84 opt: 133 Z-score: 137.7 bits: 35.0 E(): 0.018
Smith-Waterman score: 133; 35.000% identity (63.333% similar) in 60 aa overlap (10-69:649-707)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL
.: .: : : .::.. ...:..:: .
KIAA06 GSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISSI
620 630 640 650 660 670
40 50 60 70 80 90
FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ
: ::: :: .:: ... . : :. ::
KIAA06 SLS-WFLTLFLSVMPFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLGCSDEGEAMT
680 690 700 710 720 730
>>KIAA0882 ( 1291 res) hk07544s1 (1291 aa)
initn: 85 init1: 85 opt: 128 Z-score: 132.5 bits: 34.1 E(): 0.035
Smith-Waterman score: 128; 36.667% identity (60.000% similar) in 60 aa overlap (10-69:669-727)
10 20 30
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL
.: :: : : .:... .:..:: .
KIAA08 AKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTI
640 650 660 670 680 690
40 50 60 70 80 90
FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ
: ::: :: .:: ... : : :. ::
KIAA08 SLS-WFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMT
700 710 720 730 740 750
>>KIAA0019 ( 838 res) ha00537 (838 aa)
initn: 153 init1: 124 opt: 125 Z-score: 131.2 bits: 33.2 E(): 0.041
Smith-Waterman score: 125; 33.333% identity (68.519% similar) in 54 aa overlap (18-70:251-303)
10 20 30 40
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFL-
.: ..: ....::.. . .: .::.
KIAA00 KLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQ
230 240 250 260 270 280
50 60 70 80 90 100
FLJ003 CLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVP
:.. :. :: ::.:: .. :::
KIAA00 CFLDRT-PFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAK
290 300 310 320 330
>>KIAA0210 ( 801 res) ha02313 (801 aa)
initn: 122 init1: 122 opt: 122 Z-score: 128.4 bits: 32.6 E(): 0.059
Smith-Waterman score: 122; 32.692% identity (71.154% similar) in 52 aa overlap (18-69:314-365)
10 20 30 40
FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFLC
::.. ... ::... ..: .: .:
KIAA02 TLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRL
290 300 310 320 330 340
50 60 70 80 90 100
FLJ003 LFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVPK
::.: .:. .: ::::....:
KIAA02 LFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPF
350 360 370 380 390 400
201 residues in 1 query sequences
2210793 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:51:53 2009 done: Fri Feb 27 10:51:53 2009
Total Scan time: 0.370 Total Display time: 0.030
Function used was FASTA [version 34.26.5 April 26, 2007]