# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj03652.fasta.huge -Q ../query/FLJ00332.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00332, 201 aa vs ./tmplib.10216 library 2210793 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.9919+/-0.00421; mu= 17.9595+/- 0.284 mean_var=97.3707+/-20.736, 0's: 0 Z-trim: 12 B-trim: 0 in 0/40 Lambda= 0.129975 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00288 ( 217 res) sh02579 ( 217) 263 58.2 3.3e-10 KIAA1055 ( 868 res) hh09512 ( 868) 152 38.3 0.0013 KIAA1322 ( 702 res) fh13826 ( 702) 149 37.6 0.0017 KIAA1108 ( 763 res) hh03387s1 ( 763) 138 35.6 0.0072 KIAA0608 ( 775 res) hh00889b ( 775) 137 35.4 0.0083 FLJ00006 ( 401 res) as00006 ( 401) 130 33.7 0.015 KIAA0676 ( 1262 res) hk02596 (1262) 133 35.0 0.018 KIAA0882 ( 1291 res) hk07544s1 (1291) 128 34.1 0.035 KIAA0019 ( 838 res) ha00537 ( 838) 125 33.2 0.041 KIAA0210 ( 801 res) ha02313 ( 801) 122 32.6 0.059 KIAA0603 ( 1348 res) hg01488b (1348) 123 33.2 0.068 KIAA0984 ( 728 res) hj07670 ( 728) 115 31.3 0.14 KIAA1741 ( 1777 res) fh23254 (1777) 102 29.4 1.2 KIAA1849 ( 1114 res) fg05386(revised) (1114) 100 28.7 1.2 KIAA0347 ( 1281 res) hg01528(revised) (1281) 94 27.7 2.9 FLJ00263 ( 764 res) sj01530 ( 764) 90 26.6 3.7 FLJ00083 ( 216 res) as00083 ( 216) 80 23.8 7.1 KIAA1720 ( 421 res) pf00447 ( 421) 81 24.5 8.8 KIAA0293 ( 1505 res) hg03205 (1505) 86 26.3 8.9 KIAA1816 ( 1162 res) fh16716 (1162) 84 25.8 10 KIAA0275 ( 510 res) ha06214 ( 510) 80 24.4 11 KIAA0239 ( 849 res) ha06313 ( 849) 82 25.2 11 KIAA0841 ( 641 res) hk04975 ( 641) 80 24.6 12 KIAA0410 ( 505 res) hg01877 ( 505) 78 24.1 14 FLJ00252 ( 819 res) sj09394 ( 819) 79 24.6 16 KIAA1200 ( 1403 res) fg02656 (1403) 81 25.3 16 FLJ00163 ( 521 res) sh06933 ( 521) 77 23.9 16 KIAA0759 ( 673 res) hk04621 ( 673) 78 24.3 17 KIAA0208 ( 748 res) ha02713 ( 748) 77 24.1 20 KIAA0324 ( 2800 res) ee08846s1 (2800) 82 26.0 21 KIAA0896 ( 2820 res) hk08890s2 (2820) 82 26.0 21 FLJ00248 ( 501 res) sj08681 ( 501) 75 23.5 21 KIAA1862 ( 1070 res) aj00563 (1070) 78 24.6 21 KIAA1045 ( 427 res) hh00656 ( 427) 74 23.2 22 KIAA0093 ( 927 res) ha00935 ( 927) 77 24.3 22 KIAA1865 ( 723 res) fj14303 ( 723) 76 23.9 22 KIAA0284 ( 1573 res) pf09542 (1573) 79 25.0 23 FLJ00031 ( 188 res) as00031 ( 188) 70 21.9 24 KIAA0749 ( 678 res) hk04328 ( 678) 75 23.7 24 KIAA0770 ( 913 res) hk05040s1 ( 913) 76 24.1 25 KIAA1284 ( 953 res) hh09454s1 ( 953) 76 24.1 26 KIAA1171 ( 595 res) hh05501s1 ( 595) 74 23.4 26 KIAA0422 ( 1160 res) hh01205s1 (1160) 76 24.3 28 KIAA1545 ( 968 res) fj14026s1 ( 968) 75 24.0 29 FLJ00220 ( 503 res) sj05828 ( 503) 72 22.9 31 KIAA0377 ( 1412 res) hh00412 (1412) 76 24.4 31 KIAA0721 ( 433 res) hk01908 ( 433) 71 22.6 32 KIAA0450 ( 1182 res) hj05822 (1182) 75 24.1 32 FLJ00216 ( 270 res) sj05401 ( 270) 69 21.9 33 KIAA0514 ( 483 res) hf00310 ( 483) 71 22.7 34 >>FLJ00288 ( 217 res) sh02579 (217 aa) initn: 263 init1: 263 opt: 263 Z-score: 276.6 bits: 58.2 E(): 3.3e-10 Smith-Waterman score: 263; 51.562% identity (84.375% similar) in 64 aa overlap (6-69:97-160) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGV ::..::.:....::... : .::::.. . FLJ002 LLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI 70 80 90 100 110 120 40 50 60 70 80 90 FLJ003 GPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSL ::::. :::.: :.:.::. .:::::: :. :: FLJ002 DPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLGLGGAPLSPAAHSGASLCRETPK 130 140 150 160 170 180 100 110 120 130 140 150 FLJ003 FEPQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELL FLJ002 SFLVLTAHPPCRGQDHLPGGAGAAEARAGLP 190 200 210 >>KIAA1055 ( 868 res) hh09512 (868 aa) initn: 152 init1: 152 opt: 152 Z-score: 158.5 bits: 38.3 E(): 0.0013 Smith-Waterman score: 152; 36.066% identity (65.574% similar) in 61 aa overlap (9-69:750-810) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPL ..: .:: :. . ::..: :..: : KIAA10 LEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYT 720 730 740 750 760 770 40 50 60 70 80 90 FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP : .::: .:. :. ....::.:: :: KIAA10 LITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIF 780 790 800 810 820 830 100 110 120 130 140 150 FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS KIAA10 KYLRYFTRTILDARSGTDAPTTWRKSGWS 840 850 860 >>KIAA1322 ( 702 res) fh13826 (702 aa) initn: 149 init1: 149 opt: 149 Z-score: 156.3 bits: 37.6 E(): 0.0017 Smith-Waterman score: 149; 32.143% identity (75.000% similar) in 56 aa overlap (15-70:566-621) 10 20 30 40 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW : ..... ::.. :... .. : .:: .: KIAA13 FIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDW 540 550 560 570 580 590 50 60 70 80 90 100 FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG .. :...:::. . :.::.: .:: KIAA13 IFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLP 600 610 620 630 640 650 >>KIAA1108 ( 763 res) hh03387s1 (763 aa) initn: 124 init1: 124 opt: 138 Z-score: 144.8 bits: 35.6 E(): 0.0072 Smith-Waterman score: 138; 37.705% identity (60.656% similar) in 61 aa overlap (13-69:529-589) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHK----HLQQVGVGPL .. : : ::: :. ::.. .:: KIAA11 MSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPS 500 510 520 530 540 550 40 50 60 70 80 90 FLJ003 LYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEP :: ::: .:: ..:. : ::.: .. .: KIAA11 LYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIV 560 570 580 590 600 610 100 110 120 130 140 150 FLJ003 QITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRDS KIAA11 DFIKSTLPNLGLVQMEKTINQVFEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKL 620 630 640 650 660 670 >>KIAA0608 ( 775 res) hh00889b (775 aa) initn: 137 init1: 137 opt: 137 Z-score: 143.7 bits: 35.4 E(): 0.0083 Smith-Waterman score: 137; 32.143% identity (73.214% similar) in 56 aa overlap (15-70:638-693) 10 20 30 40 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEW : ..... : .. :... .. : .:: .: KIAA06 FIAFANLLNKPCQLAFFRVDHSMMLKYFATFEVFFEENLSKLFLHFKSYSLTPDIYLIDW 610 620 630 640 650 660 50 60 70 80 90 100 FLJ003 FLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLG .. :...:::. . ::::.: .:: KIAA06 IFTLYSKSLPLDLACRVWDVFCRDGEEFLFRTGLGILRLYEDILLQMDFIHIAQFLTKLP 670 680 690 700 710 720 >>FLJ00006 ( 401 res) as00006 (401 aa) initn: 130 init1: 130 opt: 130 Z-score: 139.3 bits: 33.7 E(): 0.015 Smith-Waterman score: 130; 35.484% identity (59.677% similar) in 62 aa overlap (8-69:188-249) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGP :. : .:. :. . ::.. : ::. . FLJ000 FLEEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIEL 160 170 180 190 200 210 40 50 60 70 80 90 FLJ003 LLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFE : .::: :: . . .::.:: :. :: FLJ000 SLITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASI 220 230 240 250 260 270 100 110 120 130 140 150 FLJ003 PQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELLRD FLJ000 FNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNL 280 290 300 310 320 330 >>KIAA0676 ( 1262 res) hk02596 (1262 aa) initn: 142 init1: 84 opt: 133 Z-score: 137.7 bits: 35.0 E(): 0.018 Smith-Waterman score: 133; 35.000% identity (63.333% similar) in 60 aa overlap (10-69:649-707) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL .: .: : : .::.. ...:..:: . KIAA06 GSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISSI 620 630 640 650 660 670 40 50 60 70 80 90 FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ : ::: :: .:: ... . : :. :: KIAA06 SLS-WFLTLFLSVMPFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLGCSDEGEAMT 680 690 700 710 720 730 >>KIAA0882 ( 1291 res) hk07544s1 (1291 aa) initn: 85 init1: 85 opt: 128 Z-score: 132.5 bits: 34.1 E(): 0.035 Smith-Waterman score: 128; 36.667% identity (60.000% similar) in 60 aa overlap (10-69:669-727) 10 20 30 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLL .: :: : : .:... .:..:: . KIAA08 AKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTI 640 650 660 670 680 690 40 50 60 70 80 90 FLJ003 YLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQ : ::: :: .:: ... : : :. :: KIAA08 SLS-WFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMT 700 710 720 730 740 750 >>KIAA0019 ( 838 res) ha00537 (838 aa) initn: 153 init1: 124 opt: 125 Z-score: 131.2 bits: 33.2 E(): 0.041 Smith-Waterman score: 125; 33.333% identity (68.519% similar) in 54 aa overlap (18-70:251-303) 10 20 30 40 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFL- .: ..: ....::.. . .: .::. KIAA00 KLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQ 230 240 250 260 270 280 50 60 70 80 90 100 FLJ003 CLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVP :.. :. :: ::.:: .. ::: KIAA00 CFLDRT-PFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAK 290 300 310 320 330 >>KIAA0210 ( 801 res) ha02313 (801 aa) initn: 122 init1: 122 opt: 122 Z-score: 128.4 bits: 32.6 E(): 0.059 Smith-Waterman score: 122; 32.692% identity (71.154% similar) in 52 aa overlap (18-69:314-365) 10 20 30 40 FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFLC ::.. ... ::... ..: .: .: KIAA02 TLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRL 290 300 310 320 330 340 50 60 70 80 90 100 FLJ003 LFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSLFEPQITGLGVPK ::.: .:. .: ::::....: KIAA02 LFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPF 350 360 370 380 390 400 201 residues in 1 query sequences 2210793 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:53 2009 done: Fri Feb 27 10:51:53 2009 Total Scan time: 0.370 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]