# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj04377.fasta.nr -Q ../query/FLJ00387.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 FLJ00387, 116 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7827516 sequences
  Expectation_n fit: rho(ln(x))= 4.6055+/-0.000177; mu= 7.1951+/- 0.010
 mean_var=54.3584+/-10.587, 0's: 29 Z-trim: 29  B-trim: 36 in 1/65
 Lambda= 0.173957

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|21748620|dbj|BAC03447.1| FLJ00387 protein [Homo ( 116)  756 197.0 5.3e-49


>>gi|21748620|dbj|BAC03447.1| FLJ00387 protein [Homo sap  (116 aa)
 initn: 756 init1: 756 opt: 756  Z-score: 1035.9  bits: 197.0 E(): 5.3e-49
Smith-Waterman score: 756;  100.000% identity (100.000% similar) in 116 aa overlap (1-116:1-116)

               10        20        30        40        50        60
FLJ003 FTSSMQGHHRAALHEQRRRAAWQSVSHSRLARKSIFIFVSTQHFSVSLLANKWRPIVGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 FTSSMQGHHRAALHEQRRRAAWQSVSHSRLARKSIFIFVSTQHFSVSLLANKWRPIVGGA
               10        20        30        40        50        60

               70        80        90       100       110      
FLJ003 SQPSCLTSESSGLEYVHPRGLDEAHLRLLGQMVSATGREAVARTSVNTVSTQSLLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 SQPSCLTSESSGLEYVHPRGLDEAHLRLLGQMVSATGREAVARTSVNTVSTQSLLC
               70        80        90       100       110      




116 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (2 proc)
 start: Sat Feb 28 00:13:39 2009 done: Sat Feb 28 00:17:26 2009
 Total Scan time: 534.940 Total Display time:  0.000

Function used was FASTA [version 34.26.5 April 26, 2007]