# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj04644.fasta.huge -Q ../query/FLJ00206.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00206, 702 aa vs ./tmplib.10216 library 2210292 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.1281+/-0.00412; mu= 16.2499+/- 0.279 mean_var=102.6005+/-22.565, 0's: 0 Z-trim: 4 B-trim: 24 in 1/39 Lambda= 0.126619 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00359 ( 1056 res) sh03991 (1056) 3092 575.7 9.3e-165 FLJ00180 ( 499 res) sj01466 ( 499) 159 39.5 0.0011 FLJ00240 ( 383 res) sj07454 ( 383) 119 32.1 0.15 KIAA1835 ( 623 res) fh08795s1 ( 623) 119 32.3 0.2 FLJ00330 ( 246 res) sj03258 ( 246) 104 29.1 0.74 FLJ00348 ( 778 res) sg00015 ( 778) 108 30.4 0.94 FLJ00276 ( 426 res) sh00612 ( 426) 103 29.2 1.2 FLJ00244 ( 1124 res) sj07756 (1124) 100 29.1 3.3 KIAA0495 ( 209 res) hg00106 ( 209) 88 26.1 5 FLJ00036 ( 706 res) as00036 ( 706) 94 27.8 5.2 KIAA1820 ( 1644 res) hh01321 (1644) 98 29.0 5.4 KIAA1782 ( 545 res) aj00273 ( 545) 92 27.3 5.6 KIAA1694 ( 757 res) fj11293 ( 757) 92 27.5 7 KIAA1307 ( 1678 res) fh08302 (1678) 96 28.6 7 FLJ00002 ( 1513 res) as00002 (1513) 95 28.4 7.5 KIAA1898 ( 1013 res) fk06427 (1013) 91 27.4 9.6 KIAA0315 ( 1841 res) hg00246 (1841) 94 28.3 9.6 KIAA0923 ( 626 res) hh02882 ( 626) 88 26.7 10 KIAA1106 ( 1154 res) fg01888 (1154) 90 27.3 12 KIAA0118 ( 161 res) ha00793 ( 161) 79 24.3 13 KIAA0189 ( 1132 res) ha02928 (1132) 88 27.0 15 KIAA1073 ( 675 res) hj06550 ( 675) 85 26.1 16 KIAA0014 ( 513 res) ha00442 ( 513) 82 25.5 19 KIAA1399 ( 452 res) hk07377 ( 452) 80 25.0 23 KIAA1251 ( 1483 res) hh07943 (1483) 86 26.7 23 FLJ00392 ( 274 res) sj05126 ( 274) 77 24.2 24 KIAA1177 ( 755 res) hf00837a ( 755) 82 25.7 25 FLJ00085 ( 292 res) as00085 ( 292) 77 24.3 25 KIAA1211 ( 803 res) fh00041 ( 803) 82 25.7 26 KIAA0402 ( 3284 res) hg01127s1 (3284) 89 27.7 26 KIAA1992 ( 853 res) bg00166 ( 853) 82 25.7 27 KIAA1244 ( 1872 res) hf00438s1 (1872) 86 26.8 27 KIAA0216 ( 2067 res) hf00331s1 (2067) 86 26.9 28 KIAA1776 ( 2816 res) fh11044s3 (2816) 87 27.2 31 KIAA0825 ( 553 res) hh03427 ( 553) 78 24.8 33 FLJ00416 ( 221 res) sj04686 ( 221) 73 23.4 35 KIAA1273 ( 606 res) hk09394 ( 606) 78 24.8 35 FLJ00263 ( 764 res) sj01530 ( 764) 79 25.1 36 FLJ00063 ( 133 res) as00063 ( 133) 70 22.6 36 KIAA0218 ( 777 res) ha02987 ( 777) 79 25.1 37 KIAA2027 ( 802 res) hg02843(revised) ( 802) 79 25.1 37 KIAA1862 ( 1070 res) aj00563 (1070) 80 25.5 40 KIAA0183 ( 1111 res) ha02726 (1111) 80 25.5 41 KIAA0840 ( 523 res) hk04921s1 ( 523) 76 24.4 41 KIAA0872 ( 552 res) hk07213 ( 552) 76 24.4 43 KIAA0441 ( 702 res) hh00601s1 ( 702) 77 24.7 44 KIAA0465 ( 4433 res) hg01123s2 (4433) 86 27.3 47 KIAA0539 ( 2046 res) pf00803 (2046) 82 26.2 47 KIAA0309 ( 3053 res) hg00096s1 (3053) 84 26.7 47 KIAA1730 ( 787 res) pg01135 ( 787) 77 24.8 47 >>FLJ00359 ( 1056 res) sh03991 (1056 aa) initn: 3083 init1: 3083 opt: 3092 Z-score: 3051.3 bits: 575.7 E(): 9.3e-165 Smith-Waterman score: 3092; 97.669% identity (98.517% similar) in 472 aa overlap (1-471:577-1048) 10 20 30 FLJ002 QKCQLQVHDAEALIALLQEGPHLEEVDLSG :::::::::::::::::::::::::::::: FLJ003 TTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSG 550 560 570 580 590 600 40 50 60 70 80 90 FLJ002 NQLEDEGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 NQLEDEGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKT 610 620 630 640 650 660 100 110 120 130 140 150 FLJ002 VIFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 VIFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALG 670 680 690 700 710 720 160 170 180 190 200 210 FLJ002 GSCHLGHLHLDFSGNALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 GSCHLGHLHLDFSGNALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTL 730 740 750 760 770 780 220 230 240 250 260 270 FLJ002 QWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPL :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: FLJ003 QWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPL 790 800 810 820 830 840 280 290 300 310 320 330 FLJ002 EPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 EPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKS 850 860 870 880 890 900 340 350 360 370 380 390 FLJ002 PFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGRFTGCSLSQEHVESLCWLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 PFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGRFTGCSLSQEHVESLCWLL 910 920 930 940 950 960 400 410 420 430 440 450 FLJ002 SKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQESALYLLETLPSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 SKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQESALYLLETLPSCP 970 980 990 1000 1010 1020 460 470 480 490 500 FLJ002 RVREASVN-LGSEQSFRIHFSREDQAGKTLRLSECSFRPEHVSRLATGLSKSLQLTELTL :::::::. ::: . . : : FLJ003 RVREASVKCLGSWHVWAPCFPRPFSLQPGL 1030 1040 1050 >>FLJ00180 ( 499 res) sj01466 (499 aa) initn: 268 init1: 109 opt: 159 Z-score: 159.5 bits: 39.5 E(): 0.0011 Smith-Waterman score: 181; 23.961% identity (54.523% similar) in 409 aa overlap (23-418:102-488) 10 20 30 40 50 FLJ002 QKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIAR .....:. ::. ..: . .:.. . FLJ001 YCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLT 80 90 100 110 120 130 60 70 80 90 100 110 FLJ002 KLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKTVIFMFAQEPEEQKGPQERAAFL .::: :... :.. . :.. ::. : ::: .:: :. : . .. : FLJ001 SLDLRGNSIGPQGAKALADALKINRTLTSL--SLQGNTVRDDGARSMAEALASNRT---L 140 150 160 170 180 120 130 140 150 160 170 FLJ002 DSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALGGSCHLGHLHLDFSGNALGDEGA . : :: : :....:: . :.. :..: ::.:..:: :: FLJ001 SMLHLQKNSIGPMGAQRM--ADALKQNRSLKELM---------------FSSNSIGDGGA 190 200 210 220 180 190 200 210 220 FLJ002 ARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTLQWLFRLD-----ISFESQHIL- ::. : .:.::.:. :..: .: .:. . : : :. :. :: :. . . FLJ001 KALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIA 230 240 250 260 270 280 230 240 250 260 270 280 FLJ002 --LRGDKTSRDMWATGSL-PDFPAAAKFLGFRKRCIPRSLCLSECPLEPPSLTRLCATLK : ...: ... :..: : : : .. :. :: :. .. . : .:. FLJ001 HALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ002 DCPGPLELQLSCEFLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPR . :.:. . ..:.. .. : :. : :. .... .. .:...:.. FLJ001 LNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRT 350 360 370 380 390 400 350 360 370 380 390 FLJ002 VKKVDLR--SLHHATLHFRSNEEEEGVCCGRFT--GCSLSQEHVESLCWLLSKCKDLSQV .. .::: .. : . .: . . :.. ::... . . :: . :... FLJ001 LEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHI 410 420 430 440 450 460 400 410 420 430 440 450 FLJ002 DLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQESALYLLETLPSCPRVREASVNL .:..: .:::: : . : . FLJ001 NLQGNHIGDSGARMISEAIKTNAPTCTVEM 470 480 490 >>FLJ00240 ( 383 res) sj07454 (383 aa) initn: 196 init1: 105 opt: 119 Z-score: 121.3 bits: 32.1 E(): 0.15 Smith-Waterman score: 132; 27.350% identity (56.410% similar) in 234 aa overlap (11-237:68-282) 10 20 30 FLJ002 QKCQLQVHDAEALIALLQE---GPHLEEV--DLSGNQLED ::: :::: . :: .. :::. .:.. FLJ002 GREAPPAFKQFFSSAYTLSHVNLSATKLPLEALRALLQGLSLNSHLSDLHLDLSSCELRS 40 50 60 70 80 90 40 50 60 70 80 90 FLJ002 EGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKTVIFMF : . . : . . . .:::::::.. .: : : :.. . ::.: .:. FLJ002 AGAQALQEQLGAVTCVGSLDLSDNGFDSD----LLTLVPA---LGK-NKSLKH---LFLG 100 110 120 130 140 100 110 120 130 140 150 FLJ002 AQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALGGSCHL . . : .: .: .:. :. .: : . . .. :. . : .:::.. : FLJ002 KNFNVKAKTLEE---ILHKLV-QLIQEEDCSLQSLSVADSRLKLR-TSILINALGSNTCL 150 160 170 180 190 200 160 170 180 190 200 210 FLJ002 GHLHLDFSGNALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTLQWL-- ... :.:::.. : :: :.. : ..:... ..:. : . : ..: . . . : FLJ002 AKV--DLSGNGMEDIGAKMLSKALQINSSLRTILWDRNNTSALGFLDIARALESNHTLRF 210 220 230 240 250 220 230 240 250 260 270 FLJ002 FRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPLEPP . . .: :: ..: .:.: FLJ002 MSFPVSDISQAYRSAPERT-EDVWQKIQWCLVRNNHSQTCPQEQAFRLQQGLVTSSAEQM 260 270 280 290 300 310 >>KIAA1835 ( 623 res) fh08795s1 (623 aa) initn: 147 init1: 80 opt: 119 Z-score: 118.9 bits: 32.3 E(): 0.2 Smith-Waterman score: 136; 24.870% identity (55.440% similar) in 193 aa overlap (2-193:225-396) 10 20 30 FLJ002 QKCQLQVHDAEALIALLQEGPHLEEVDLSGN . .:. : :: .. :::: . : KIAA18 GKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQN 200 210 220 230 240 250 40 50 60 70 80 90 FLJ002 QLEDEGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKTV .. : .:.: . . : ..:.:: .. : ::. .:: .:.. : KIAA18 GINHPGITALAQAFAVNPLLRVINLNDNTFTEKG------AVA----MAETLKTLRQVEV 260 270 280 290 300 100 110 120 130 140 150 FLJ002 IFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALGG : :.. ..:: .:. :.. .:. ... :. : ... . .:.. KIAA18 I-NFGDCLVRSKGA---VAIADAIRGGLPKL-----KELNLSFCEIKRDAALAVAEAMAD 310 320 330 340 350 160 170 180 190 200 210 FLJ002 SCHLGHLHLDFSGNALGDEGAARLAQLLPGLGALQSL-NLSENGLSLDAVLGLVRCFSTL . .: .: :..::.::.:: .: ..: :.. . : .::.. KIAA18 KAELEKL--DLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEAE 360 370 380 390 400 410 220 230 240 250 260 270 FLJ002 QWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPL KIAA18 EEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPSRKILDPNTGEPAPVLSSPPPADVSTF 420 430 440 450 460 470 >>FLJ00330 ( 246 res) sj03258 (246 aa) initn: 104 init1: 104 opt: 104 Z-score: 108.8 bits: 29.1 E(): 0.74 Smith-Waterman score: 104; 40.000% identity (68.000% similar) in 50 aa overlap (145-194:158-207) 120 130 140 150 160 170 FLJ002 LMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCKALGGSCHLGHLHLDFSGNALGDEGAAR : .:. . :: ::::.:. : . :: FLJ003 PQILALPPSFAPWSPLSQLPPPRVTSSPRALLDGLALNTHLRDLHLDLSACELRSAGAQV 130 140 150 160 170 180 180 190 200 210 220 230 FLJ002 LAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTLQWLFRLDISFESQHILLRGDKTSR . .:. ::..::.:..:: FLJ003 IQDLVCDAGAVSSLDLADNGEAAGEPILASSTRFPIPTLPLQLRLVRDPSHPQASAQTW 190 200 210 220 230 240 >>FLJ00348 ( 778 res) sg00015 (778 aa) initn: 65 init1: 65 opt: 108 Z-score: 106.9 bits: 30.4 E(): 0.94 Smith-Waterman score: 108; 28.125% identity (57.812% similar) in 128 aa overlap (64-188:619-744) 40 50 60 70 80 90 FLJ002 EDEGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTLAELHISLQHKTVIF :.. .:.. .:: :.: .::.. .. FLJ003 HELQHTELARSVEEAMESGALARLTGPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQS 590 600 610 620 630 640 100 110 120 130 140 150 FLJ002 MFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHL-EQLCKALGGS .. : .: . : : .: . : : :.. :. . .: :... .. :::. : FLJ003 LLPQLLYCRKLRLDTNQFQDPVMELLGSVL--SGKDCRIQKISLAENQISNKGAKALARS 650 660 670 680 690 700 160 170 180 190 200 210 FLJ002 CHLGH--LHLDFSGNALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTL ... ::. ::..: .:: ::. : .: :: FLJ003 LLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLRVKFMYHKIDCFRRVPEADACN 710 720 730 740 750 760 220 230 240 250 260 270 FLJ002 QWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPL FLJ003 PSTLGGQGRWIT 770 >>FLJ00276 ( 426 res) sh00612 (426 aa) initn: 88 init1: 52 opt: 103 Z-score: 105.0 bits: 29.2 E(): 1.2 Smith-Waterman score: 119; 30.120% identity (47.390% similar) in 249 aa overlap (115-342:178-398) 90 100 110 120 130 140 FLJ002 SLQHKTVIFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLE- : :. :. : :: .:: : ::. :: FLJ002 RSDAPSPPLPGLRLCEYSCQHSCLHLRHPGLHLHHPG-LHLSYLGLRLIHLGLHLPHLGL 150 160 170 180 190 200 150 160 170 180 190 FLJ002 QLCK---ALGGS--CHLGHLHLDFSGNALGDEG--AARLAQLLPGLGALQSLNLSENGLS .::. .: : :: : :.:.. : : : .:. :: :: : ::. :: FLJ002 HLCHLHLSLRGLHLCHPG-LYLSYLGFHLIHLGFHLIHLGLHLPHLG----LYLSHLGLH 210 220 230 240 250 260 200 210 220 230 240 250 FLJ002 LDAVLGLVRCFSTLQWLFRLDISFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRK : ::. .: : .: .: . .. : .. .: : :: :: . FLJ002 LPH-LGFHQCHPGL-YLSHLGL-----YLPYLG------LYPPSSGAAVPILAKSAGFNQ 270 280 290 300 260 270 280 290 300 310 FLJ002 RCIPRSLCLSECPLEPPSLTRLCATLKDCPG--PLELQLSCEFLSDQ----SLETLLDCL : : : : :: .: : .. : : : .: .::. . .. : . FLJ002 -CSPVVLGTSS---EPG----VCITTSSGPHSTPQEAAVS-HFLDGKMRPIEVKLLAEGT 310 320 330 340 350 320 330 340 350 360 FLJ002 PQLPQLSL---LQLSQTGLSPK----SPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNE :. ..: :. .: : :. :: :. . :. : FLJ002 PEADPMNLPAFLSSFSTTLRPRARKWSPVLVEGHLAPHPLRPCPTTSPGPCPLCTHPPRH 360 370 380 390 400 410 370 380 390 400 410 420 FLJ002 EEEGVCCGRFTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPI FLJ002 PLFTRFG 420 >>FLJ00244 ( 1124 res) sj07756 (1124 aa) initn: 73 init1: 47 opt: 100 Z-score: 97.1 bits: 29.1 E(): 3.3 Smith-Waterman score: 100; 27.189% identity (50.691% similar) in 217 aa overlap (419-619:282-490) 390 400 410 420 430 440 FLJ002 LLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQESALY--LLETL : .:. : . : ... :.::. ::: : FLJ002 QLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPH-TLAVETALWKQLLE-L 260 270 280 290 300 450 460 470 480 490 500 FLJ002 PSCPRVREASVNLGSEQSFRIHFSREDQAGKTLRLSECSFRPEHVSRLATGLSKSLQLTE : ::.. : .:.. . :.. . .. : :.:. : . .:..: . ..:: FLJ002 VELQRWPEAAA-LIQEKG---EASQRRELVQVQR-SHCGHFLEVARELGSGDTLQVQLGT 310 320 330 340 350 360 510 520 530 540 550 FLJ002 LTLTQCCLGQKQL-------AILLSLVGRPAGLFSLRVQEPWADRARVLSLLEV-----C . . :: .. : : ::. :: :: . :: : .. : FLJ002 SLQHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFC 370 380 390 400 410 420 560 570 580 590 600 610 FLJ002 A--QASGSVTEISISETQQQLCVQLEFPRQEENPEAVALRLAHCDLGAHHSLLVGQLMET : .:.:.:.: . : : :.: :. : : .. :.:: : . . . . FLJ002 ALESATGAVAE-NDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYL 430 440 450 460 470 480 620 630 640 650 660 670 FLJ002 CARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRIQSSQDPGRLLPDLLPFDPHQ : ::. : FLJ002 CIRLEGLPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHL 490 500 510 520 530 540 >>KIAA0495 ( 209 res) hg00106 (209 aa) initn: 51 init1: 51 opt: 88 Z-score: 93.8 bits: 26.1 E(): 5 Smith-Waterman score: 88; 46.341% identity (51.220% similar) in 41 aa overlap (658-697:27-62) 630 640 650 660 670 680 FLJ002 EDDDASSLLLQSLLLSLSELKTFRIQSSQDPGRLLPDLLPFDPHQADLQLCEHRGPRPPG ::.: : : : : :: :: :: KIAA04 MGAGDGPGAWWVAVGADGGGTLPPTGPGHLHPAACPGGP-----ALPVHRPPRVPG 10 20 30 40 50 690 700 FLJ002 IWS-GPLPPLGGAGLV . : ::: :: KIAA04 LGSPGPLTGLGHLPGKAPAPPSAPAGRDPLLAREASPGGIVLAPSPKGSAPSEHPPPLGD 60 70 80 90 100 110 >>FLJ00036 ( 706 res) as00036 (706 aa) initn: 88 init1: 52 opt: 94 Z-score: 93.5 bits: 27.8 E(): 5.2 Smith-Waterman score: 104; 23.810% identity (53.133% similar) in 399 aa overlap (121-503:329-697) 100 110 120 130 140 FLJ002 VIFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSSRRMRLTHCGLQEKHLEQLCK-AL : : .. .:. . .:. .:.: :. : FLJ000 YRASSRELRRLGSLTLSPLYSHLADTLAGLSVLRATGATYRFEEENLRLFELNQRCQFAT 300 310 320 330 340 350 150 160 170 180 190 200 FLJ002 GGSCHLGHLHLDFSGNALGDEGAA-RLAQLLPGLG--ALQSLNLSENGLSLDAVL-GLVR ... . ..:.. : :. . :. :.: ::. .: .:.:: .::: ..: ::: FLJ000 SATMQWLDIRLQLMGAAVVSAIAGIALVQHQQGLANPGLVGLSLSY-ALSLTGLLSGLVS 360 370 380 390 400 410 210 220 230 240 250 260 FLJ002 CFSTLQWLFRLDISFESQHILLRGDKTSRDM-----WATGSLPDFPAAAKFLGFRKRCIP :. . .. .: : . .. . : : . .: .. :..: .: FLJ000 SFTQTEAMLVSVERLEEYTCDLPQEPQGQPLQLGTGWLTQGGVEFQDVV--LAYRPG-LP 420 430 440 450 460 470 270 280 290 300 310 FLJ002 RSL-CLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQLSLL .: .. : ..: . . . . : : : ..: .: ..::: . . :: : FLJ000 NALDGVTFC-VQPGEKLGIVGRTGSGKSSLLLVL-FRLLEPSSGRVLLDGV-DTSQLELA 480 490 500 510 520 530 320 330 340 350 360 370 FLJ002 QL-SQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGRFTGCSL :: :: .. :. :::...:. ...: ..::. ... .. : : FLJ000 QLRSQLAIIPQEPFLFSGTVR-----ENLDPQGLHKDRALWQALKQ-----------CHL 540 550 560 570 380 390 400 410 420 430 FLJ002 SQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQES : : . :. : .. . .. .:: ::. : :: . : .: . :..:.. FLJ000 S-EVITSMGGLDGELGEGGR-SLS---LGQRQLLCLARALLTDAKILCIDEATASVDQKT 580 590 600 610 620 630 440 450 460 470 480 490 FLJ002 ALYLLETLPSCPRVREASV-NLGSEQSFRIHFSRED--QAGKTLRL-SECSFRPEHVSRL : .:. : : . .: ... . . .. .: :::....: : ..: . : . FLJ000 DQLLQQTI--CKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPATLRNQPHSLF 640 650 660 670 680 500 510 520 530 540 550 FLJ002 ATGLSKSLQLTELTLTQCCLGQKQLAILLSLVGRPAGLFSLRVQEPWADRARVLSLLEVC :..: : FLJ000 QQLLQSSQQGVPASLGGP 690 700 702 residues in 1 query sequences 2210292 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:38 2009 done: Fri Feb 27 10:44:38 2009 Total Scan time: 0.700 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]