# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj04948.fasta.nr -Q ../query/FLJ00391.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00391, 124 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827532 sequences Expectation_n fit: rho(ln(x))= 4.3936+/-0.000179; mu= 9.3998+/- 0.010 mean_var=55.8785+/-10.789, 0's: 42 Z-trim: 43 B-trim: 0 in 0/65 Lambda= 0.171574 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748628|dbj|BAC03451.1| FLJ00391 protein [Homo ( 124) 869 222.3 1.5e-56 >>gi|21748628|dbj|BAC03451.1| FLJ00391 protein [Homo sap (124 aa) initn: 869 init1: 869 opt: 869 Z-score: 1171.6 bits: 222.3 E(): 1.5e-56 Smith-Waterman score: 869; 100.000% identity (100.000% similar) in 124 aa overlap (1-124:1-124) 10 20 30 40 50 60 FLJ003 IGANDQEIAGCSVGGQGKMGLHGGEVGHLFQMLVSLVRWNLRNGYLNVAKWYDSKADLIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 IGANDQEIAGCSVGGQGKMGLHGGEVGHLFQMLVSLVRWNLRNGYLNVAKWYDSKADLIF 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 LLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLL 70 80 90 100 110 120 FLJ003 LCLL :::: gi|217 LCLL 124 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 00:33:29 2009 done: Sat Feb 28 00:37:18 2009 Total Scan time: 545.110 Total Display time: 0.000 Function used was FASTA [version 34.26.5 April 26, 2007]