# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj05150.fasta.huge -Q ../query/FLJ00335.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00335, 157 aa vs ./tmplib.10216 library 2210837 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.7270+/-0.00338; mu= 16.3877+/- 0.230 mean_var=69.4357+/-15.237, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.153916 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1610 ( 484 res) fj11544 ( 484) 111 32.9 0.023 KIAA0583 ( 1952 res) af01829 (1952) 93 29.8 0.81 KIAA0457 ( 845 res) hg00693 ( 845) 82 26.8 2.7 KIAA0726 ( 973 res) hk02972 ( 973) 82 26.9 2.9 KIAA2015 ( 996 res) fk09763 ( 996) 80 26.5 4.1 KIAA0475 ( 438 res) hh00451 ( 438) 76 25.1 4.7 KIAA1684 ( 762 res) fh24594 ( 762) 78 25.9 4.7 KIAA1047 ( 2348 res) hh01221s1 (2348) 81 27.2 5.7 KIAA1343 ( 520 res) fj00420 ( 520) 75 25.0 6 KIAA0071 ( 396 res) ha00472 ( 396) 73 24.4 7 FLJ00391 ( 124 res) sj04948 ( 124) 67 22.3 9.1 FLJ00181 ( 368 res) sj01527 ( 368) 71 23.9 9.1 KIAA0763 ( 843 res) hk04726 ( 843) 74 25.1 9.3 KIAA1333 ( 741 res) fh15412 ( 741) 73 24.8 10 KIAA1177 ( 755 res) hf00837a ( 755) 73 24.8 10 KIAA0095 ( 832 res) ha01471 ( 832) 72 24.6 13 KIAA1008 ( 935 res) hh04776s1 ( 935) 72 24.7 13 KIAA1796 ( 245 res) fj18826 ( 245) 66 22.5 16 KIAA1266 ( 601 res) hj06235 ( 601) 69 23.7 16 FLJ00155 ( 612 res) sh06465 ( 612) 69 23.8 17 KIAA0744 ( 619 res) hk04110 ( 619) 69 23.8 17 KIAA1572 ( 492 res) fh23424 ( 492) 68 23.4 17 KIAA1995 ( 1011 res) bh00088 (1011) 70 24.3 19 KIAA0357 ( 2992 res) hh00016y2 (2992) 74 25.8 19 KIAA1510 ( 1140 res) fg02934(revised) (1140) 70 24.4 20 KIAA1092 ( 1154 res) hk04417 (1154) 70 24.4 21 KIAA1493 ( 415 res) fj08657 ( 415) 66 22.9 21 FLJ00214 ( 322 res) sj05155 ( 322) 65 22.5 21 KIAA1310 ( 794 res) fh10589 ( 794) 68 23.7 23 FLJ00164 ( 822 res) sh07138 ( 822) 68 23.7 23 KIAA0749 ( 678 res) hk04328 ( 678) 67 23.4 24 KIAA1142 ( 467 res) hh05864 ( 467) 65 22.7 26 KIAA1409 ( 2461 res) af00533 (2461) 71 25.1 27 KIAA0298 ( 901 res) hf00341(revised) ( 901) 67 23.6 28 FLJ00081 ( 333 res) as00081 ( 333) 63 22.1 29 KIAA0144 ( 983 res) ha03843 ( 983) 67 23.6 30 FLJ00211 ( 213 res) sj05061 ( 213) 61 21.3 31 KIAA1075 ( 1505 res) hj06716s1 (1505) 68 24.1 32 KIAA1155 ( 145 res) hh04176 ( 145) 59 20.7 34 KIAA0978 ( 1368 res) fg02182 (1368) 67 23.8 36 KIAA1924 ( 613 res) hh01339 ( 613) 64 22.6 36 KIAA0774 ( 1381 res) bh00283 (1381) 67 23.8 36 KIAA0809 ( 1385 res) hk10195 (1385) 67 23.8 36 KIAA1849 ( 1114 res) fg05386(revised) (1114) 66 23.5 37 KIAA0825 ( 553 res) hh03427 ( 553) 63 22.4 39 KIAA0017 ( 1253 res) ha02425 (1253) 66 23.5 40 KIAA1587 ( 991 res) fj08327 ( 991) 65 23.2 40 KIAA1837 ( 639 res) fh22040s1 ( 639) 63 22.5 43 FLJ00383 ( 380 res) sj02824 ( 380) 61 21.7 43 KIAA0250 ( 1122 res) ha02790 (1122) 65 23.2 43 >>KIAA1610 ( 484 res) fj11544 (484 aa) initn: 87 init1: 64 opt: 111 Z-score: 135.9 bits: 32.9 E(): 0.023 Smith-Waterman score: 111; 27.083% identity (51.389% similar) in 144 aa overlap (11-146:152-283) 10 20 30 40 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRALAAADPHKAD ..: ::: ::::::. : .. : KIAA16 PRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYEND 130 140 150 160 170 180 50 60 70 80 90 FLJ003 --LVWQPWEDLESS-----REKQRQVEDLLTAACSSIFPGAGT-NQELALHCLHESRGDI :.:.: :.. .. .:.. : . .: :. ..: ::. : . : KIAA16 DQLLWDPEYLPEDKVIIFLKDASRRTGD--EKGVEAIPEGSHIKDNEQALYELVKCNFDT 190 200 210 220 230 100 110 120 130 140 150 FLJ003 LETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKLVSWA :.: .: .. .. . :.. : : . :..:. : ::: :.: KIAA16 EEALRRLRFN--VKAAREELSV--------WTEEECRNFEQGLKAYGKDFHLIQANKVRT 240 250 260 270 280 FLJ003 LFQGK KIAA16 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS 290 300 310 320 330 340 >>KIAA0583 ( 1952 res) af01829 (1952 aa) initn: 39 init1: 39 opt: 93 Z-score: 108.1 bits: 29.8 E(): 0.81 Smith-Waterman score: 93; 21.875% identity (57.812% similar) in 128 aa overlap (7-125:259-381) 10 20 30 FLJ003 GLTSCPFHS--SRRINVGSRFQAEIPLMRDRALAAA .:. :: .. .:.. .. ..: . . KIAA05 VRAMSDLQSLQNQHTNALKRCEEVAKETDFYHTLHSRLLSDQTRLKDDVDMLRRE--NGQ 230 240 250 260 270 280 40 50 60 70 80 90 FLJ003 DPHKADLVWQPWEDLESSREK-QRQVEDLLTAACSSIFPGAGTNQELALHCLHESRGDIL .. .:. : :::.. .:. :... :: : .... :... :. :... : : KIAA05 LLRERNLLQQSWEDMKRLHEEDQKEIGDL-RAQQQQVLKHNGSSE--ILNKLYDTAMDKL 290 300 310 320 330 340 100 110 120 130 140 FLJ003 ETLNKLL--LKK----PLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQK :...: :.: . :: :. . : .. .. KIAA05 EVVKKDYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRDTAIQLQHQCA 350 360 370 380 390 400 150 FLJ003 LVSWALFQGK KIAA05 LSLRRFEAIHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEKYREERDAVYS 410 420 430 440 450 460 >>KIAA0457 ( 845 res) hg00693 (845 aa) initn: 51 init1: 51 opt: 82 Z-score: 98.6 bits: 26.8 E(): 2.7 Smith-Waterman score: 82; 21.622% identity (54.054% similar) in 148 aa overlap (2-146:350-493) 10 20 30 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRAL : .: ... :...: : .. .. ... :. KIAA04 PSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMEVIS-LRLKLQKLQEDAV 320 330 340 350 360 370 40 50 60 70 80 FLJ003 AAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALH--CLHESR : ::. . : ::::. . . . : ::.. ... . ::. ... KIAA04 ENDDYDKAETLQQRLEDLEQEKISLHFQLPSRQPALSSFLGHLAAQVQAALRRGATQQAS 380 390 400 410 420 430 90 100 110 120 130 140 FLJ003 GDILETLNKLLLK-KPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKL :: .: . : .. . :.: . : : : . :.. ..: : . .:... KIAA04 GD--DTHTPLRMEPRLLEPTAQDSLHVSITRRD-WLLQEKQQLQKEIEALQARMFVLEAK 440 450 460 470 480 490 150 FLJ003 VSWALFQGK KIAA04 DQQLRREIEEQEQQLQWQGCDLTPLVGQLSLGQLQEVSKALQDTLASAGQIPFHAEPPET 500 510 520 530 540 550 >>KIAA0726 ( 973 res) hk02972 (973 aa) initn: 67 init1: 67 opt: 82 Z-score: 98.0 bits: 26.9 E(): 2.9 Smith-Waterman score: 82; 36.066% identity (60.656% similar) in 61 aa overlap (59-119:22-80) 30 40 50 60 70 80 FLJ003 RALAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHES :: :::.: :: .::.: .. : KIAA07 GVEKVMVLGCELSGSTRVVVGVEALLTGA-SSPLPGVGPANKHKPWIEAEY 10 20 30 40 50 90 100 110 120 130 140 FLJ003 RGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKL .: ..:. : .::. :: .. : .:.: KIAA07 QGIVMENDNTVLLNPPLFALDKD-APLRYAGEICGFRLHGSGVPFEAVILDKATGEGLIR 60 70 80 90 100 150 FLJ003 VSWALFQGK KIAA07 AKEPVDCEAQKEHTFTIQAYDCGEGPDGANTKKSHKATVHVRVNDVNEFAPVFVERLYRA 110 120 130 140 150 160 >>KIAA2015 ( 996 res) fk09763 (996 aa) initn: 60 init1: 60 opt: 80 Z-score: 95.5 bits: 26.5 E(): 4.1 Smith-Waterman score: 80; 30.909% identity (61.818% similar) in 55 aa overlap (53-103:549-603) 30 40 50 60 70 80 FLJ003 IPLMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELAL : .:...:.:: : :.:... KIAA20 QHRIKEMKQMHPNGEAKESQSIGKQNSLEERIRQQELENLLLERQLEDARKEGDNKEIVI 520 530 540 550 560 570 90 100 110 120 130 FLJ003 H----CLHESRGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIY . ::.... :.:: :: :.:. KIAA20 NIHRDCLENGKEDLLEERNKELMKEYNYLKEKLLQCEKEKAEREVIVREFQEELVDHLKT 580 590 600 610 620 630 >>KIAA0475 ( 438 res) hh00451 (438 aa) initn: 44 init1: 44 opt: 76 Z-score: 94.3 bits: 25.1 E(): 4.7 Smith-Waterman score: 80; 26.446% identity (50.413% similar) in 121 aa overlap (18-127:172-283) 10 20 30 40 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMR-DRALAAADPHKADLVWQPW : .::. .. :: :. :.: :: . KIAA04 ILEGGQKVVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGF---HRAPLVVGRF 150 160 170 180 190 50 60 70 80 90 FLJ003 EDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLH--ESR-----GDILETLNKL .:.. ... . : : : .:.: . .: . :.. :::.: : KIAA04 VNLRT------EIKPVATEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIMEGSVTL 200 210 220 230 240 250 100 110 120 130 140 150 FLJ003 LLKK--PLRPHNHPLATYHYTGS-DQWKMAERKLFNKGIAIYKKDFFLVQKLVSWALFQG : ::. : :: . . :. .:.. : KIAA04 WLPDVWPLQKHRHPWGRTYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDY 260 270 280 290 300 310 FLJ003 K KIAA04 LIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLN 320 330 340 350 360 370 >>KIAA1684 ( 762 res) fh24594 (762 aa) initn: 95 init1: 45 opt: 78 Z-score: 94.3 bits: 25.9 E(): 4.7 Smith-Waterman score: 78; 38.182% identity (65.455% similar) in 55 aa overlap (10-59:273-326) 10 20 30 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRALAAADPHK- : :.. ..: : : ::.:.:.:. . . KIAA16 LRGQLQQLRKLQLQNQESVRALLKRTEAELSMRVSEAARRQ-EDPLQRQRTLVEEERLRY 250 260 270 280 290 300 40 50 60 70 80 90 FLJ003 ---ADLVWQPWEDLESSREK-QRQVEDLLTAACSSIFPGAGTNQELALHCLHESRGDILE .:. : .:::.: :: ::.: KIAA16 LNDEELITQQLNDLEKSVEKIQRDVSHNHRLVPGPELEEKALVLKQLGETLTELKAHFPG 310 320 330 340 350 360 >>KIAA1047 ( 2348 res) hh01221s1 (2348 aa) initn: 43 init1: 43 opt: 81 Z-score: 92.8 bits: 27.2 E(): 5.7 Smith-Waterman score: 81; 24.706% identity (62.353% similar) in 85 aa overlap (28-112:874-952) 10 20 30 40 50 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRALAAADPHKADLVWQPWEDLESSREKQR ::: ..:. ::: ......: . KIAA10 TKADSVDVEVRVPENHASKVEGDNTKERDLDRASEKVEPRDEDLVVA--QQINAQRPEP- 850 860 870 880 890 900 60 70 80 90 100 110 FLJ003 QVEDLLTAACSSIFPGAGTNQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHY : .. .:.::. : .. . . .:. ..:. ...:...::.: .:: KIAA10 QSDNDSSATCSADEDVDGEPERQRMFPM-DSKPSLLNPTGSILVSSPLKP--NPLDLPQL 910 920 930 940 950 120 130 140 150 FLJ003 TGSDQWKMAERKLFNKGIAIYKKDFFLVQKLVSWALFQGK KIAA10 QHRAAVIPPMVSCTPCNIPIGTPVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRSS 960 970 980 990 1000 1010 >>KIAA1343 ( 520 res) fj00420 (520 aa) initn: 74 init1: 46 opt: 75 Z-score: 92.4 bits: 25.0 E(): 6 Smith-Waterman score: 111; 22.464% identity (55.072% similar) in 138 aa overlap (13-149:26-140) 10 20 30 40 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRALAAADPHKAD-LVWQPW . ::...::.:: . : .: .. :::.:. KIAA13 VSLPFSFFSFLFFIYIFWHCFADVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPY 10 20 30 40 50 60 50 60 70 80 90 100 FLJ003 EDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHESRGDILETLNKLLLKKPLR ... ... ... .. : . : : : :: : . .: ..: : KIAA13 HSIPDAK-----LDEYIAIAKEK----HGYNVEQALGMLFWHKHNIEKSLADL------- 70 80 90 100 110 120 130 140 150 FLJ003 PHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKLVSWALFQGK :. :. :.: . .. ::....... :.: .:... KIAA13 PNFTPFP-------DEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 110 120 130 140 150 KIAA13 TRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTS 160 170 180 190 200 210 >>KIAA0071 ( 396 res) ha00472 (396 aa) initn: 69 init1: 42 opt: 73 Z-score: 91.2 bits: 24.4 E(): 7 Smith-Waterman score: 113; 22.368% identity (52.632% similar) in 152 aa overlap (1-149:4-132) 10 20 30 40 50 FLJ003 GLTSCPFHSSRRINVGSRFQAEIPLMRDRALAAADPHKADL---VWQPWEDLESSRE : .: :.. . :: ..:: .: . :: . .. .: ::.: ..: KIAA00 GSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNL----- 10 20 30 40 50 60 70 80 90 100 110 FLJ003 KQRQVEDLLTAACSSIFPGAGTNQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLAT .. .... .. : . : :.: :: : . .: ..: : :. :. KIAA00 SEAKLDEYIAIAKEK----HGYNMEQALGMLFWHKHNIEKSLADL-------PNFTPFP- 60 70 80 90 100 120 130 140 150 FLJ003 YHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKLVSWALFQGK :.: . .. ::....... : : .:... KIAA00 ------DEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVM 110 120 130 140 150 KIAA00 DRHARKQKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVPQVKKEKHSTQAK 160 170 180 190 200 210 157 residues in 1 query sequences 2210837 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:56 2009 done: Fri Feb 27 10:51:56 2009 Total Scan time: 0.340 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]