# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj05575.fasta.huge -Q ../query/FLJ00218.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00218, 174 aa vs ./tmplib.10216 library 2210820 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.7026+/-0.0039; mu= 18.3591+/- 0.263 mean_var=81.0094+/-17.899, 0's: 0 Z-trim: 16 B-trim: 48 in 1/39 Lambda= 0.142497 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1719 ( 1050 res) pf00330s1 (1050) 796 172.9 4.1e-44 KIAA0147 ( 1630 res) ha01022s1 (1630) 182 47.0 5.1e-06 FLJ00117 ( 331 res) as00117 ( 331) 161 41.6 4.4e-05 KIAA0300 ( 2847 res) hf00389s1 (2847) 158 42.4 0.00021 KIAA1526 ( 963 res) fj04743(revised) ( 963) 152 40.4 0.00028 KIAA1634 ( 874 res) fh21781(revised) ( 874) 151 40.2 0.0003 KIAA1232 ( 520 res) fh08445 ( 520) 149 39.4 0.00031 FLJ00011 ( 394 res) as00011 ( 394) 147 38.8 0.00035 KIAA1095 ( 1098 res) hk06736 (1098) 142 38.5 0.0012 KIAA1365 ( 831 res) fj02517 ( 831) 140 37.9 0.0014 KIAA0380 ( 1539 res) hh00518 (1539) 129 36.0 0.0094 KIAA0208 ( 748 res) ha02713 ( 748) 119 33.5 0.027 KIAA1849 ( 1114 res) fg05386(revised) (1114) 120 34.0 0.029 KIAA0705 ( 1483 res) hg03359s1 (1483) 118 33.7 0.044 KIAA1225 ( 1371 res) fh04221s1 (1371) 114 32.9 0.075 KIAA1202 ( 1502 res) fg03353 (1502) 111 32.3 0.12 KIAA0613 ( 734 res) hg01088b ( 734) 106 30.8 0.17 KIAA0583 ( 1952 res) af01829 (1952) 102 30.6 0.5 KIAA0559 ( 1212 res) hh01510 (1212) 94 28.7 1.2 FLJ00012 ( 182 res) as00012 ( 182) 85 25.5 1.6 KIAA0548 ( 452 res) hh00769 ( 452) 88 26.8 1.7 KIAA0216 ( 2067 res) hf00331s1 (2067) 93 28.8 1.9 KIAA0382 ( 1443 res) ef00443 (1443) 89 27.8 2.7 KIAA0392 ( 550 res) hh00034 ( 550) 84 26.1 3.3 KIAA0340 ( 1053 res) hg01396 (1053) 84 26.5 4.7 KIAA1941 ( 1233 res) ah04470 (1233) 84 26.6 5.1 KIAA1620 ( 1398 res) hj04150 (1398) 84 26.7 5.5 KIAA1284 ( 953 res) hh09454s1 ( 953) 82 26.0 5.9 KIAA1444 ( 416 res) fg03469a ( 416) 78 24.6 6.8 KIAA1412 ( 1386 res) ha04795 (1386) 82 26.3 7.2 KIAA0061 ( 903 res) ha01242 ( 903) 80 25.6 7.7 KIAA0303 ( 2137 res) hg00009 (2137) 83 26.8 7.9 FLJ00238 ( 204 res) sj07412 ( 204) 73 23.1 9.5 KIAA0184 ( 863 res) ha02918 ( 863) 76 24.7 13 KIAA1998 ( 607 res) bf00063 ( 607) 74 24.1 15 FLJ00326 ( 122 res) sj01834 ( 122) 68 21.8 15 KIAA0722 ( 1066 res) hk02030s1 (1066) 76 24.9 15 KIAA1639 ( 2584 res) af14886 (2584) 79 26.1 15 KIAA1320 ( 567 res) fh13757 ( 567) 73 23.8 16 KIAA0083 ( 1077 res) ha03631 (1077) 75 24.7 17 KIAA0751 ( 1200 res) hk04424 (1200) 75 24.8 18 KIAA0138 ( 962 res) ha03743 ( 962) 74 24.4 19 KIAA0561 ( 1308 res) hh01676 (1308) 75 24.8 19 KIAA0404 ( 1956 res) hg01236 (1956) 76 25.3 20 KIAA1149 ( 532 res) fg04087 ( 532) 71 23.4 21 KIAA0742 ( 1338 res) hk04073s1 (1338) 74 24.6 22 KIAA1580 ( 640 res) fj04979 ( 640) 71 23.5 23 KIAA0558 ( 1145 res) hh01485 (1145) 73 24.3 24 KIAA0660 ( 490 res) hk01902 ( 490) 69 22.9 26 FLJ00153 ( 497 res) sh06127 ( 497) 69 22.9 27 >>KIAA1719 ( 1050 res) pf00330s1 (1050 aa) initn: 796 init1: 796 opt: 796 Z-score: 885.4 bits: 172.9 E(): 4.1e-44 Smith-Waterman score: 796; 100.000% identity (100.000% similar) in 122 aa overlap (17-138:20-141) 10 20 30 40 50 FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGKDAGGADVSLACRRQSIPEEFRGITVVELIK ::::::::::::::::::::::::::::::::::::::::: KIAA17 AGETIANMLCGLSRETPGEADDGPYSKGGKDAGGADVSLACRRQSIPEEFRGITVVELIK 10 20 30 40 50 60 60 70 80 90 100 110 FLJ002 KEGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA17 KEGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEII 70 80 90 100 110 120 120 130 140 150 160 170 FLJ002 TLLKNVGERVVLEVEYELPPPGGCPWTGNFLHCLGCGWTRLPPHQGLGGRDHARWSG ::::::::::::::::::::: KIAA17 TLLKNVGERVVLEVEYELPPPAPENNPRIISKTVDVSLYKEGNSFGFVLRGGAHEDGHKS 130 140 150 160 170 180 >>KIAA0147 ( 1630 res) ha01022s1 (1630 aa) initn: 172 init1: 141 opt: 182 Z-score: 201.4 bits: 47.0 E(): 5.1e-06 Smith-Waterman score: 182; 32.394% identity (55.634% similar) in 142 aa overlap (16-144:830-966) 10 20 30 40 FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGKDAGGADVSLACRRQSIPE : :: :: . .:: . : .. : KIAA01 LRGAGTAVQMRVWRERMVEPENAVTITPLRPEDD--YSPRERRGGGLRLPLLPPES--PG 800 810 820 830 840 850 50 60 70 80 90 FLJ002 EFRGITVVELIKKEGSTLGLTISGGTDK------DGKPRVSNLRPGGLAARSDLLNIGDY .: :. : ..: . ::..:.:: . :. :: . :: : :. :..:: KIAA01 PLRQRHVACLARSERG-LGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDR 860 870 880 890 900 910 100 110 120 130 140 150 FLJ002 IRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYE----LPP---PGGCPWTGNFLHCLG . :.::. .:. :::. ..:: .. ..: .: : ::: : . : : KIAA01 VLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAGGPLPPSPLPHSSPPTAAVATTSI 920 930 940 950 960 970 160 170 FLJ002 CGWTRLPPHQGLGGRDHARWSG KIAA01 TTATPGVPGLPSLAPSLLAAALEGPYPVEEIRLPRAGGPLGLSIVGGSDHSSHPFGVQEP 980 990 1000 1010 1020 1030 >>FLJ00117 ( 331 res) as00117 (331 aa) initn: 192 init1: 143 opt: 161 Z-score: 184.6 bits: 41.6 E(): 4.4e-05 Smith-Waterman score: 161; 40.230% identity (65.517% similar) in 87 aa overlap (53-138:115-199) 30 40 50 60 70 80 FLJ002 SKGGKDAGGADVSLACRRQSIPEEFRGITVVELIKKEGSTLGLTISGGTDKDGKPRV-SN ::: :. :. ::.:::: :.. : : :. FLJ001 RQCEDLVKLKIRKDEDNSDELETTGAVSYTVEL-KRYGGPLGITISG-TEEPFDPIVISG 90 100 110 120 130 140 90 100 110 120 130 140 FLJ002 LRPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPGGC : ::: :. ...:: : ..:.. : .: : ::. .:: :.:... .: : FLJ001 LTKRGLAERTGAIHVGDRILAINNVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLP 150 160 170 180 190 200 150 160 170 FLJ002 PWTGNFLHCLGCGWTRLPPHQGLGGRDHARWSG FLJ001 RKSGSLSETSDADEDPADALKGGLPAARFSPAVPSVDSAVESWDSSATEGGFGGPGSYTP 210 220 230 240 250 260 >>KIAA0300 ( 2847 res) hf00389s1 (2847 aa) initn: 207 init1: 86 opt: 158 Z-score: 172.4 bits: 42.4 E(): 0.00021 Smith-Waterman score: 162; 33.065% identity (58.065% similar) in 124 aa overlap (12-131:308-423) 10 20 30 40 FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGK-DAGGADVSLACRR : . : .::::: : ..: : KIAA03 PDSLKEVAGPHLERSEVDRGTEHRIPKTDAPLTTSNDKRRFSKGGKTDFQSSD----CLA 280 290 300 310 320 330 50 60 70 80 90 FLJ002 QSIPEEFRGITVVELIKKEGSTLGLTISGGTDKDGKPR---VSNLRPGGLAARSDLLNIG . :: : .::.: :.. ::. .::: . .:. :.... :: : :. :..: KIAA03 R---EEVGRIWKMELLK-ESDGLGIQVSGGRGSKRSPHAIVVTQVKEGGAAHRDGRLSLG 340 350 360 370 380 100 110 120 130 140 150 FLJ002 DYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPGGCPWTGNFLHCLGCGWTR : . .:: :. : :.: ...:... : : : KIAA03 DELLVINGHLLVGLSHEEAVAILRSATGMVQLVVASKENSAEDLLRLTSKSLPDLTSSVE 390 400 410 420 430 440 160 170 FLJ002 LPPHQGLGGRDHARWSG KIAA03 DVSSWTDNEDQEADGEEDEGTSSSVQRAMPGTDEPQDVCGAEESKGNLESPKQGSNKIKL 450 460 470 480 490 500 >>KIAA1526 ( 963 res) fj04743(revised) (963 aa) initn: 149 init1: 73 opt: 152 Z-score: 170.2 bits: 40.4 E(): 0.00028 Smith-Waterman score: 154; 32.308% identity (53.077% similar) in 130 aa overlap (14-140:171-283) 10 20 30 40 FLJ002 QEWKRKWNSAFPSFSPADDGPYSK---GGKDAGGADVSLACRR . :: :: . :: :..: KIAA15 PVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT-PYRQPAWGGPDSAG--------- 150 160 170 180 190 50 60 70 80 90 100 FLJ002 QSIPEEFRGITVVELIKKEGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYI : : : ... . .:: ::..: ::... :: ..::.:: . : .:: : KIAA15 ---PGEVRLVSLRRAKAHEG--LGFSIRGGSEHGVGIYVSLVEPGSLAEKEGL-RVGDQI 200 210 220 230 240 110 120 130 140 150 160 FLJ002 RSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPGGCPWTGNFLHCLGCGWTRLPP :: :.:. : : . ::. ....:: : ::: KIAA15 LRVNDKSLARVTHAEAVKALKG-SKKLVLSVYSAGRIPGGYVTNHIYTWVDPQGRSISPP 250 260 270 280 290 300 170 FLJ002 HQGLGGRDHARWSG KIAA15 SGLPQPHGGALRQQEGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYIT 310 320 330 340 350 360 >>KIAA1634 ( 874 res) fh21781(revised) (874 aa) initn: 177 init1: 104 opt: 151 Z-score: 169.5 bits: 40.2 E(): 0.0003 Smith-Waterman score: 151; 28.889% identity (57.037% similar) in 135 aa overlap (16-139:566-695) 10 20 30 40 FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGKDAGGADVSLA-CRRQSIP : ::. . . . :. .. : . : KIAA16 KQVLDLMTTAARNGHVLLTVRRKIFYGEKQPEDDSSQAFISTQNGSPRLNRAEVPARPAP 540 550 560 570 580 590 50 60 70 80 90 FLJ002 EEFRGITVVELIKKEGSTLGLTISGGTDKDGKP------RVSNLRPGGLAARSDLLNIGD .: .. : .::. .:..: :.:. : ... . :. : : :..:: KIAA16 QEPYDVV---LQRKENEGFGFVIL--TSKNKPPPGVIPHKIGRVIEGSPADRCGKLKVGD 600 610 620 630 640 650 100 110 120 130 140 150 FLJ002 YIRSVNGIHLTRLRHDEIITLLKNVGERVVLEV----EYELPPPGGCPWTGNFLHCLGCG .: .::: ...: ::.:. :.:..: :.: : :.. :: : KIAA16 HISAVNGQSIVELSHDNIVQLIKDAGVTVTLTVIAEEEHHGPPSGTNSARQSPALQHRPM 660 670 680 690 700 710 160 170 FLJ002 WTRLPPHQGLGGRDHARWSG KIAA16 GQSQANHIPGDRSALEGEIGKDVSTSYRHSWSDHKHLAQPDTAVISVVGSRHNQNLGCYP 720 730 740 750 760 770 >>KIAA1232 ( 520 res) fh08445 (520 aa) initn: 141 init1: 107 opt: 149 Z-score: 169.4 bits: 39.4 E(): 0.00031 Smith-Waterman score: 149; 39.506% identity (62.963% similar) in 81 aa overlap (54-133:57-136) 30 40 50 60 70 80 FLJ002 KGGKDAGGADVSLACRRQSIPEEFRGITVVELIKKEGST-LGLTISGGTDKDGKPRVSNL ..: ..::: ::..: :: : .: :: . KIAA12 ASASAWRRASQRWAWPLRSLRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGI-FVSFI 30 40 50 60 70 80 90 100 110 120 130 140 FLJ002 RPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPGGCP :: : : : :: : ::::..: :.. . :: .:. :.. ..: KIAA12 LAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFE 90 100 110 120 130 140 150 160 170 FLJ002 WTGNFLHCLGCGWTRLPPHQGLGGRDHARWSG KIAA12 SKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILH 150 160 170 180 190 200 >>FLJ00011 ( 394 res) as00011 (394 aa) initn: 44 init1: 44 opt: 147 Z-score: 168.3 bits: 38.8 E(): 0.00035 Smith-Waterman score: 147; 24.432% identity (51.136% similar) in 176 aa overlap (6-172:175-350) 10 20 30 FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGKDAGGADVS : .: : . :: .: : : .. . FLJ000 SSRGQGKSPGRRSPSPVPTPAPSMTNGRYHKPRKARPPLPRPLDGEAAKVGAKQGPSESG 150 160 170 180 190 200 40 50 60 70 80 90 FLJ002 L-ACRRQSIPEEFRGITVVELIKKEGSTLGLTISGGTDKDGKP--RVSNLRPGGLAARSD . ... .. : . ..: ..::..:::: .. .: .. .. ::: : : FLJ000 TEGTAKEAAMKNPSGELKTVTLSKMKQSLGISISGGIESKVQPMVKIEKIFPGGAAFLSG 210 220 230 240 250 260 100 110 120 130 140 FLJ002 LLNIGDYIRSVNGIHLTRLRHDEIITLLK-----NVGERVVLEVEYELPPPGGCPWTGNF :. : . .:.: .: .. :.. . .. .. : . : :. : : : .. FLJ000 ALQAGFELVAVDGENLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPSPRPSPSDSSA 270 280 290 300 310 320 150 160 170 FLJ002 LHCLGCGWTRLPPHQGLGGRD-HARWSG : : .:: :: : . :.: FLJ000 LTDGGLPADHLPAHQPLDAAPVPAHWLPEPPTNPQTPPTDARLLQPTPSPAPSPALQTPD 330 340 350 360 370 380 >>KIAA1095 ( 1098 res) hk06736 (1098 aa) initn: 128 init1: 105 opt: 142 Z-score: 158.6 bits: 38.5 E(): 0.0012 Smith-Waterman score: 142; 32.000% identity (63.000% similar) in 100 aa overlap (45-136:275-372) 20 30 40 50 60 70 FLJ002 SPADDGPYSKGGKDAGGADVSLACRRQSIPEEFRGITVVELIKKEGSTLGLTISGGT--- :: ...:.: .......::..: :: KIAA10 ALRYQKKFTEYSARLDSLSRCVAAPPGGKGEETKSLTLV--LHRDSGSLGFNIIGGRPSV 250 260 270 280 290 300 80 90 100 110 120 FLJ002 -DKDGKPR----VSNLRPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEIITLLKNVGER ..::. ::.. .: ::. :.: : : ::: :.: ::. . .:.. : KIAA10 DNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEP 310 320 330 340 350 360 130 140 150 160 170 FLJ002 VVLEVEYELPPPGGCPWTGNFLHCLGCGWTRLPPHQGLGGRDHARWSG .:..: . : KIAA10 IVVQVLRRTPRTKMFTPPSESQLVDTGTQTDITFEHIMALTKMSSPSPPVLDPYLLPEEH 370 380 390 400 410 420 >>KIAA1365 ( 831 res) fj02517 (831 aa) initn: 167 init1: 91 opt: 140 Z-score: 157.5 bits: 37.9 E(): 0.0014 Smith-Waterman score: 140; 34.000% identity (62.000% similar) in 100 aa overlap (44-135:738-829) 20 30 40 50 60 70 FLJ002 FSPADDGPYSKGGKDAGGADVSLACRRQSIPEEFRGITVVELIKKEGSTLGLTISGGTDK ::.: :.. :. : ::..:::: . KIAA13 IQIPSSQATRGPQPGRCLIQTKGQRSMDGYPEQF----CVRIEKNPG--LGFSISGGISG 710 720 730 740 750 760 80 90 100 110 120 FLJ002 DGKPR--------VSNLRPGGLAARSDLLNIGDYIRSVNGIHLTRLRHDEIITLLKNVGE .:.: :. ..: : : :.::. :: : ..:: .....:.. . :::. . KIAA13 QGNPFKPSDKGIFVTRVQPDGPA--SNLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQN 770 780 790 800 810 130 140 150 160 170 FLJ002 RVVLEVEYELPPPGGCPWTGNFLHCLGCGWTRLPPHQGLGGRDHARWSG : : .. :: KIAA13 TVDLVIQRELTV 820 830 174 residues in 1 query sequences 2210820 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:48 2009 done: Fri Feb 27 10:44:48 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]