# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj06426.fasta.nr -Q ../query/FLJ00396.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00396, 172 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826552 sequences Expectation_n fit: rho(ln(x))= 4.4379+/-0.000186; mu= 11.2821+/- 0.010 mean_var=72.3808+/-13.890, 0's: 31 Z-trim: 32 B-trim: 122 in 1/65 Lambda= 0.150752 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748636|dbj|BAC03455.1| FLJ00396 protein [Homo ( 172) 1277 286.0 1.9e-75 >>gi|21748636|dbj|BAC03455.1| FLJ00396 protein [Homo sap (172 aa) initn: 1277 init1: 1277 opt: 1277 Z-score: 1510.9 bits: 286.0 E(): 1.9e-75 Smith-Waterman score: 1277; 100.000% identity (100.000% similar) in 172 aa overlap (1-172:1-172) 10 20 30 40 50 60 FLJ003 RWSPEASPSCWLRAWASNSCFIMSADFCSSCMTRPLFSVTSWVRRRFCSFSIRIVCCCHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RWSPEASPSCWLRAWASNSCFIMSADFCSSCMTRPLFSVTSWVRRRFCSFSIRIVCCCHP 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 GKEVNVRAGQRGPEEDVGRARLAPAAASNSPTHRATSCTLGSSRPSGWGLPAGPKSALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GKEVNVRAGQRGPEEDVGRARLAPAAASNSPTHRATSCTLGSSRPSGWGLPAGPKSALAL 70 80 90 100 110 120 130 140 150 160 170 FLJ003 LWPRRHWRSCTGCSRCWYQSRPRHHLQTLQQHHLLLLQAPSSASGGRSRRRW :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LWPRRHWRSCTGCSRCWYQSRPRHHLQTLQQHHLLLLQAPSSASGGRSRRRW 130 140 150 160 170 172 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 01:05:39 2009 done: Sat Feb 28 01:09:57 2009 Total Scan time: 620.280 Total Display time: 0.000 Function used was FASTA [version 34.26.5 April 26, 2007]