# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj06856.fasta.nr -Q ../query/FLJ00233.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00233, 535 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823480 sequences Expectation_n fit: rho(ln(x))= 5.1089+/-0.000187; mu= 12.0949+/- 0.010 mean_var=71.1768+/-14.377, 0's: 40 Z-trim: 66 B-trim: 5175 in 2/64 Lambda= 0.152021 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676668|dbj|BAB84986.1| FLJ00233 protein [Homo ( 535) 3515 780.2 0 gi|119574813|gb|EAW54428.1| cadherin-like 23, isof ( 677) 2978 662.5 1.1e-187 gi|57209716|emb|CAI40838.1| cadherin-like 23 [Homo ( 728) 2978 662.5 1.1e-187 gi|119574815|gb|EAW54430.1| cadherin-like 23, isof ( 843) 2978 662.6 1.3e-187 gi|21619654|gb|AAH32581.1| CDH23 protein [Homo sap (1061) 2978 662.6 1.5e-187 gi|123123257|emb|CAI13625.2| cadherin-like 23 [Hom (1066) 2978 662.6 1.5e-187 gi|17366834|sp|Q9H251.1|CAD23_HUMAN RecName: Full= (3354) 2978 663.0 3.7e-187 gi|189571674|ref|NP_071407.4| cadherin-like 23 iso (3354) 2978 663.0 3.7e-187 gi|55958988|emb|CAI13426.1| cadherin-like 23 [Homo (3359) 2978 663.0 3.7e-187 gi|40807027|gb|AAH65284.1| CDH23 protein [Homo sap (1381) 2973 661.6 4e-187 gi|114631095|ref|XP_507839.2| PREDICTED: cadherin (3372) 2967 660.6 2e-186 gi|194205987|ref|XP_001917733.1| PREDICTED: cadher (3367) 2895 644.8 1.1e-181 gi|194679342|ref|XP_001252945.2| PREDICTED: simila (3627) 2882 642.0 8.5e-181 gi|149038757|gb|EDL93046.1| rCG22004, isoform CRA_ (2934) 2863 637.7 1.3e-179 gi|149038756|gb|EDL93045.1| rCG22004, isoform CRA_ (2935) 2863 637.7 1.3e-179 gi|149038755|gb|EDL93044.1| rCG22004, isoform CRA_ (2970) 2863 637.7 1.3e-179 gi|194042774|ref|XP_001925718.1| PREDICTED: simila (3315) 2863 637.8 1.4e-179 gi|60417436|emb|CAI59610.1| cadherin 23 [Mus muscu (3267) 2850 634.9 1e-178 gi|60417434|emb|CAI59609.1| cadherin 23 [Mus muscu (3283) 2850 634.9 1e-178 gi|148700220|gb|EDL32167.1| cadherin 23 (otocadher (3319) 2850 634.9 1e-178 gi|12965351|gb|AAK07670.1| cadherin 23 [Mus muscul (3322) 2850 634.9 1e-178 gi|60417438|emb|CAI59611.1| cadherin 23 [Mus muscu (3352) 2850 634.9 1e-178 gi|148700222|gb|EDL32169.1| cadherin 23 (otocadher (3354) 2850 634.9 1e-178 gi|17366658|sp|Q99PF4.1|CAD23_MOUSE RecName: Full= (3354) 2850 634.9 1e-178 gi|126343067|ref|XP_001365044.1| PREDICTED: simila (3105) 2769 617.1 2.2e-173 gi|118092647|ref|XP_421595.2| PREDICTED: similar t (3365) 2629 586.5 4.1e-164 gi|46452161|gb|AAS98176.1| cadherin 23 [Danio reri (3366) 2095 469.3 7.3e-129 gi|6102888|emb|CAB59256.1| hypothetical protein [H ( 373) 1908 427.6 2.9e-117 gi|47216565|emb|CAG04743.1| unnamed protein produc (1526) 1822 409.2 4.2e-111 gi|210122935|gb|EEA70639.1| hypothetical protein B (3107) 889 204.8 2.9e-49 gi|149443068|ref|XP_001521302.1| PREDICTED: simila ( 136) 814 187.4 2.3e-45 gi|193688227|ref|XP_001944272.1| PREDICTED: simila (3688) 773 179.4 1.5e-41 gi|118116390|ref|XP_428195.2| PREDICTED: similar t (1058) 752 174.4 1.4e-40 gi|210102823|gb|EEA50867.1| hypothetical protein B (4039) 752 174.8 3.9e-40 gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seve (2941) 740 172.1 1.9e-39 gi|189537376|ref|XP_001920772.1| PREDICTED: cadher (3597) 736 171.3 4.1e-39 gi|126290893|ref|XP_001377336.1| PREDICTED: simila ( 836) 725 168.4 7e-39 gi|50254110|gb|AAT72164.1| cadherin 23 isoform B2 (1079) 709 165.0 9.7e-38 gi|50254108|gb|AAT72163.1| cadherin 23 isoform B1 (1114) 709 165.0 1e-37 gi|50254114|gb|AAT72166.1| cadherin 23 isoform B2 (1079) 707 164.6 1.3e-37 gi|50254112|gb|AAT72165.1| cadherin 23 isoform B1 (1114) 707 164.6 1.3e-37 gi|73985848|ref|XP_533840.2| PREDICTED: similar to (3301) 712 166.0 1.5e-37 gi|76655579|ref|XP_870077.1| PREDICTED: similar to (4588) 709 165.5 3e-37 gi|119574817|gb|EAW54432.1| cadherin-like 23, isof (1079) 701 163.2 3.3e-37 gi|119625019|gb|EAX04614.1| FAT tumor suppressor h (3377) 706 164.7 3.7e-37 gi|119625020|gb|EAX04615.1| FAT tumor suppressor h (3841) 706 164.7 4.1e-37 gi|8928104|sp|Q14517.1|FAT1_HUMAN RecName: Full=Pr (4590) 706 164.8 4.7e-37 gi|210122929|gb|EEA70633.1| hypothetical protein B (3154) 704 164.2 4.8e-37 gi|189518225|ref|XP_687264.3| PREDICTED: cadherin (2851) 700 163.3 8.1e-37 gi|47229646|emb|CAG06842.1| unnamed protein produc (2982) 700 163.3 8.4e-37 >>gi|18676668|dbj|BAB84986.1| FLJ00233 protein [Homo sap (535 aa) initn: 3515 init1: 3515 opt: 3515 Z-score: 4164.0 bits: 780.2 E(): 0 Smith-Waterman score: 3515; 100.000% identity (100.000% similar) in 535 aa overlap (1-535:1-535) 10 20 30 40 50 60 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLI 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 YLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 YLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATD 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 LDRSREYGQESIIYSLEGSTQFRINARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LDRSREYGQESIIYSLEGSTQFRINARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQ 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 KTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 KTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSI 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 QPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSATVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 QPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSATVF 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 VNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMD 370 380 390 400 410 420 430 440 450 460 470 480 FLJ002 FLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIHVLGCERRDAHLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 FLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIHVLGCERRDAHLLP 430 440 450 460 470 480 490 500 510 520 530 FLJ002 GRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQLLHHRWQRGWEVQRGLPAMPL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQLLHHRWQRGWEVQRGLPAMPL 490 500 510 520 530 >>gi|119574813|gb|EAW54428.1| cadherin-like 23, isoform (677 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3526.0 bits: 662.5 E(): 1.1e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:138-613) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|119 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 110 120 130 140 150 160 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 170 180 190 200 210 220 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 230 240 250 260 270 280 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 290 300 310 320 330 340 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 350 360 370 380 390 400 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 410 420 430 440 450 460 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 470 480 490 500 510 520 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 530 540 550 560 570 580 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|119 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 590 600 610 620 630 640 >>gi|57209716|emb|CAI40838.1| cadherin-like 23 [Homo sap (728 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3525.6 bits: 662.5 E(): 1.1e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:39-514) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|572 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 10 20 30 40 50 60 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 70 80 90 100 110 120 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 130 140 150 160 170 180 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 190 200 210 220 230 240 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 250 260 270 280 290 300 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 310 320 330 340 350 360 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 370 380 390 400 410 420 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 430 440 450 460 470 480 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|572 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 490 500 510 520 530 540 >>gi|119574815|gb|EAW54430.1| cadherin-like 23, isoform (843 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3524.7 bits: 662.6 E(): 1.3e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:138-613) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|119 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 110 120 130 140 150 160 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 170 180 190 200 210 220 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 230 240 250 260 270 280 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 290 300 310 320 330 340 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 350 360 370 380 390 400 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 410 420 430 440 450 460 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 470 480 490 500 510 520 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 530 540 550 560 570 580 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|119 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 590 600 610 620 630 640 >>gi|21619654|gb|AAH32581.1| CDH23 protein [Homo sapiens (1061 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3523.3 bits: 662.6 E(): 1.5e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:522-997) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|216 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|216 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 >>gi|123123257|emb|CAI13625.2| cadherin-like 23 [Homo sa (1066 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3523.3 bits: 662.6 E(): 1.5e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:527-1002) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|123 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|123 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 >>gi|17366834|sp|Q9H251.1|CAD23_HUMAN RecName: Full=Cadh (3354 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3516.3 bits: 663.0 E(): 3.7e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:522-997) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|173 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|173 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 >>gi|189571674|ref|NP_071407.4| cadherin-like 23 isoform (3354 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3516.3 bits: 663.0 E(): 3.7e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:522-997) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|189 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|189 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 >>gi|55958988|emb|CAI13426.1| cadherin-like 23 [Homo sap (3359 aa) initn: 2974 init1: 2974 opt: 2978 Z-score: 3516.3 bits: 663.0 E(): 3.7e-187 Smith-Waterman score: 2978; 97.689% identity (98.739% similar) in 476 aa overlap (5-480:527-1002) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|559 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|559 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 >>gi|40807027|gb|AAH65284.1| CDH23 protein [Homo sapiens (1381 aa) initn: 2969 init1: 2969 opt: 2973 Z-score: 3515.8 bits: 661.6 E(): 4e-187 Smith-Waterman score: 2973; 97.479% identity (98.739% similar) in 476 aa overlap (5-480:522-997) 10 20 30 FLJ002 LPGWNYELIQRFTLTIIARDGGGEETTGRVRINV .::::::::::::::::::::::::::::: gi|408 FGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVRINV 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 LDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFD 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 ISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTF 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 SKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTT 680 690 700 710 720 730 220 230 240 250 260 270 FLJ002 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 SLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMT 740 750 760 770 780 790 280 290 300 310 320 330 FLJ002 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 PPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAMLDRENPDPHEAE 800 810 820 830 840 850 340 350 360 370 380 390 FLJ002 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 LMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQ 860 870 880 890 900 910 400 410 420 430 440 450 FLJ002 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAG ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|408 VVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAKYQLRVVASDAG 920 930 940 950 960 970 460 470 480 490 500 510 FLJ002 TPTKSSTSTLTIHVLGCERRDAHLLPGRVQCVCVRGRATRVPGGLAELHGQRRGPQCRAQ ::::::::::::::: . . ..: gi|408 TPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELS 980 990 1000 1010 1020 1030 535 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 23:17:32 2009 done: Fri Feb 27 23:24:36 2009 Total Scan time: 949.470 Total Display time: 0.250 Function used was FASTA [version 34.26.5 April 26, 2007]