# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj06933.fasta.nr -Q ../query/FLJ00234.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00234, 163 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826970 sequences Expectation_n fit: rho(ln(x))= 4.7898+/-0.000178; mu= 8.0419+/- 0.010 mean_var=72.1729+/-14.565, 0's: 37 Z-trim: 39 B-trim: 0 in 0/66 Lambda= 0.150969 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676670|dbj|BAB84987.1| FLJ00234 protein [Homo ( 163) 1062 239.8 1.4e-61 gi|14715055|gb|AAH10691.1| SLC46A1 protein [Homo s ( 431) 1054 238.4 9.3e-61 gi|30268299|emb|CAD89945.1| hypothetical protein [ ( 261) 602 139.8 2.8e-31 gi|114668461|ref|XP_511356.2| PREDICTED: hypotheti ( 318) 602 139.8 3.2e-31 gi|194381450|dbj|BAG58679.1| unnamed protein produ ( 409) 602 139.9 3.9e-31 gi|74732636|sp|Q96NT5.1|PCFT_HUMAN RecName: Full=P ( 459) 602 140.0 4.2e-31 gi|149724722|ref|XP_001504178.1| PREDICTED: solute ( 459) 593 138.0 1.6e-30 gi|81170643|sp|Q5EBA8.1|PCFT_RAT RecName: Full=Pro ( 459) 592 137.8 1.9e-30 gi|109113732|ref|XP_001106954.1| PREDICTED: simila ( 460) 591 137.6 2.2e-30 gi|19353603|gb|AAH24522.1| Slc46a1 protein [Mus mu ( 196) 584 135.7 3.5e-30 gi|81170642|sp|Q6PEM8.1|PCFT_MOUSE RecName: Full=P ( 459) 584 136.1 6.4e-30 gi|60359814|dbj|BAD90126.1| mFLJ00234 protein [Mus ( 471) 584 136.1 6.5e-30 gi|12833845|dbj|BAB22685.1| unnamed protein produc ( 459) 582 135.6 8.6e-30 gi|73967214|ref|XP_548286.2| PREDICTED: similar to ( 459) 573 133.7 3.4e-29 gi|66393133|gb|AAY45892.1| heme carrier protein 1 ( 459) 566 132.2 9.7e-29 gi|119936242|gb|ABM06094.1| heme carrier protein 1 ( 371) 563 131.4 1.3e-28 gi|122131744|sp|Q05B81.1|PCFT_BOVIN RecName: Full= ( 459) 563 131.5 1.5e-28 gi|498983|emb|CAA84040.1| unnamed protein product ( 293) 545 127.4 1.7e-27 gi|119571473|gb|EAW51088.1| heme carrier protein 1 ( 114) 460 108.5 3.1e-22 gi|149632954|ref|XP_001507012.1| PREDICTED: hypoth ( 388) 465 110.1 3.6e-22 gi|81170644|sp|Q6DCX5.1|PCFT_XENLA RecName: Full=P ( 463) 460 109.1 8.7e-22 gi|171847320|gb|AAI61741.1| LOC100145771 protein [ ( 462) 443 105.4 1.1e-20 gi|56205808|emb|CAI25543.1| solute carrier family ( 123) 420 99.8 1.4e-19 gi|118100189|ref|XP_415815.2| PREDICTED: similar t ( 473) 426 101.7 1.5e-19 gi|126314025|ref|XP_001375817.1| PREDICTED: hypoth ( 467) 400 96.0 7.5e-18 gi|81170641|sp|Q7ZWG6.1|PCFT_DANRE RecName: Full=P ( 481) 387 93.2 5.4e-17 gi|210106813|gb|EEA54780.1| hypothetical protein B ( 468) 286 71.2 2.2e-10 gi|210096110|gb|EEA44261.1| hypothetical protein B ( 468) 281 70.1 4.8e-10 gi|34530432|dbj|BAC85896.1| unnamed protein produc ( 304) 268 67.1 2.5e-09 gi|57104894|ref|XP_534517.1| PREDICTED: similar to ( 461) 257 64.9 1.8e-08 gi|114649232|ref|XP_001137647.1| PREDICTED: hypoth ( 386) 253 63.9 2.8e-08 gi|81882604|sp|Q5BK75.1|S46A3_RAT RecName: Full=So ( 461) 253 64.0 3.2e-08 gi|114649224|ref|XP_001137737.1| PREDICTED: hypoth ( 461) 253 64.0 3.2e-08 gi|73909102|gb|AAH36662.1| Solute carrier family 4 ( 461) 253 64.0 3.2e-08 gi|46329709|gb|AAH68556.1| Solute carrier family 4 ( 461) 253 64.0 3.2e-08 gi|74723295|sp|Q7Z3Q1.1|S46A3_HUMAN RecName: Full= ( 461) 253 64.0 3.2e-08 gi|114649222|ref|XP_001137492.1| PREDICTED: simila ( 463) 253 64.0 3.2e-08 gi|38511860|gb|AAH60850.1| SLC46A3 protein [Homo s ( 463) 253 64.0 3.2e-08 gi|16416764|gb|AAL18405.1|AF315594_1 FKSG16 [Homo ( 463) 253 64.0 3.2e-08 gi|75055077|sp|Q5RBM3.1|S46A3_PONAB RecName: Full= ( 463) 253 64.0 3.2e-08 gi|160175923|sp|A5D7V7.1|S46A3_BOVIN RecName: Full ( 461) 252 63.8 3.7e-08 gi|126327607|ref|XP_001376385.1| PREDICTED: hypoth ( 457) 251 63.5 4.3e-08 gi|193787583|dbj|BAG52789.1| unnamed protein produ ( 461) 249 63.1 5.9e-08 gi|149565858|ref|XP_001519811.1| PREDICTED: simila ( 382) 248 62.8 6e-08 gi|109120298|ref|XP_001098006.1| PREDICTED: simila ( 460) 248 62.9 6.8e-08 gi|109120294|ref|XP_001098307.1| PREDICTED: simila ( 461) 248 62.9 6.9e-08 gi|109120292|ref|XP_001098201.1| PREDICTED: simila ( 464) 248 62.9 6.9e-08 gi|81906124|sp|Q9DC26.1|S46A3_MOUSE RecName: Full= ( 460) 246 62.5 9.3e-08 gi|148673895|gb|EDL05842.1| RIKEN cDNA 1200006F02 ( 492) 246 62.5 9.7e-08 gi|149730177|ref|XP_001494396.1| PREDICTED: solute ( 460) 229 58.8 1.2e-06 >>gi|18676670|dbj|BAB84987.1| FLJ00234 protein [Homo sap (163 aa) initn: 1062 init1: 1062 opt: 1062 Z-score: 1261.9 bits: 239.8 E(): 1.4e-61 Smith-Waterman score: 1062; 100.000% identity (100.000% similar) in 163 aa overlap (1-163:1-163) 10 20 30 40 50 60 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYC 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 LADAWVAEIGLAFNILGMVVFAFATITPLMFTGALFSGVACVNSLAMLTASGIFNSLYPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LADAWVAEIGLAFNILGMVVFAFATITPLMFTGALFSGVACVNSLAMLTASGIFNSLYPA 70 80 90 100 110 120 130 140 150 160 FLJ002 TLNFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP ::::::::::::::::::::::::::::::::::::::::::: gi|186 TLNFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP 130 140 150 160 >>gi|14715055|gb|AAH10691.1| SLC46A1 protein [Homo sapie (431 aa) initn: 1054 init1: 1054 opt: 1054 Z-score: 1247.0 bits: 238.4 E(): 9.3e-61 Smith-Waterman score: 1054; 99.387% identity (100.000% similar) in 163 aa overlap (1-163:269-431) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|147 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 130 140 150 FLJ002 FTGALFSGVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGMLEKA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 FTGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGMLEKA 360 370 380 390 400 410 160 FLJ002 DPHLEFQQFPQSP ::::::::::::: gi|147 DPHLEFQQFPQSP 420 430 >>gi|30268299|emb|CAD89945.1| hypothetical protein [Homo (261 aa) initn: 602 init1: 602 opt: 602 Z-score: 717.8 bits: 139.8 E(): 2.8e-31 Smith-Waterman score: 988; 84.817% identity (85.340% similar) in 191 aa overlap (1-163:71-261) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|302 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 50 60 70 80 90 100 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM 110 120 130 140 150 160 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::::::::::::::::::::: gi|302 FTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATL 170 180 190 200 210 220 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP ::::::::::::::::::::::::::::::::::::::::: gi|302 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP 230 240 250 260 >>gi|114668461|ref|XP_511356.2| PREDICTED: hypothetical (318 aa) initn: 602 init1: 602 opt: 602 Z-score: 716.7 bits: 139.8 E(): 3.2e-31 Smith-Waterman score: 979; 84.293% identity (84.817% similar) in 191 aa overlap (1-163:128-318) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|114 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 100 110 120 130 140 150 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM 160 170 180 190 200 210 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::::::::::::::::::::: gi|114 FTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATL 220 230 240 250 260 270 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP ::::::::::::::::::::::::::::::: ::::::::: gi|114 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHPEFQQFPQSP 280 290 300 310 >>gi|194381450|dbj|BAG58679.1| unnamed protein product [ (409 aa) initn: 602 init1: 602 opt: 602 Z-score: 715.2 bits: 139.9 E(): 3.9e-31 Smith-Waterman score: 602; 100.000% identity (100.000% similar) in 93 aa overlap (1-93:269-361) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|194 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 130 140 150 FLJ002 FTGALFSGVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGMLEKA ::: gi|194 FTGKVCGLRDSLSQRHWVRTGGRPLTAPRCGSFLCLWKHSYAPSLHWRTDN 360 370 380 390 400 >>gi|74732636|sp|Q96NT5.1|PCFT_HUMAN RecName: Full=Proto (459 aa) initn: 602 init1: 602 opt: 602 Z-score: 714.6 bits: 140.0 E(): 4.2e-31 Smith-Waterman score: 988; 84.817% identity (85.340% similar) in 191 aa overlap (1-163:269-459) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|747 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::::::::::::::::::::: gi|747 FTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATL 360 370 380 390 400 410 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP ::::::::::::::::::::::::::::::::::::::::: gi|747 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP 420 430 440 450 >>gi|149724722|ref|XP_001504178.1| PREDICTED: solute car (459 aa) initn: 586 init1: 586 opt: 593 Z-score: 704.0 bits: 138.0 E(): 1.6e-30 Smith-Waterman score: 937; 79.581% identity (84.293% similar) in 191 aa overlap (1-163:269-459) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|149 RARLFTLRHHRSIVQLYVTPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM :::.::::::::::::::::::.:.::::::::.:::::::::::::::::::::::::: gi|149 WDSRLIGYGSAAQHLPYLTSLLVLRLLQYCLADTWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::.:::::::::::::::::: gi|149 FTGYGLLFLSLVTTPVIRAKLSKMVLHSEHGALFSAVACVNALAMLTASGIFNSLYPATL 360 370 380 390 400 410 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP ::::::::::::.::.:::.:::::::: :: ::::::::: gi|149 NFMKGFPFLLGAALLFIPAILIGMLEKATPHPEFQQFPQSP 420 430 440 450 >>gi|81170643|sp|Q5EBA8.1|PCFT_RAT RecName: Full=Proton- (459 aa) initn: 979 init1: 584 opt: 592 Z-score: 702.8 bits: 137.8 E(): 1.9e-30 Smith-Waterman score: 919; 77.895% identity (84.211% similar) in 190 aa overlap (1-162:269-458) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::.:::::::::::::::::::: gi|811 STRLFTLRHHRSIVQLYVVPAPEKSRMHLALYSLAIFVVVTVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM ::::::::::::::::::::::.:.:::.::::.:::::::::::::::::::::::::: gi|811 WDSKLIGYGSAAQHLPYLTSLLGLRLLQFCLADTWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::::::: ::::::::::::: gi|811 FTGYGLLFLSLVTTPVIRAKLSKLVSESEQGALFSAVACVNSLAMLMASGIFNSLYPATL 360 370 380 390 400 410 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP :::::::::::::::.:::.:::.:::..:: :::::::. gi|811 NFMKGFPFLLGAGLLFIPAILIGVLEKVNPHPEFQQFPQNS 420 430 440 450 >>gi|109113732|ref|XP_001106954.1| PREDICTED: similar to (460 aa) initn: 591 init1: 591 opt: 591 Z-score: 701.6 bits: 137.6 E(): 2.2e-30 Smith-Waterman score: 952; 82.199% identity (84.293% similar) in 191 aa overlap (1-163:270-460) 10 20 30 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLC :::::::::::::::::::::::::::::: gi|109 STRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLC 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 WDSKLIGYGSAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLM ::::::::::::::::::::::.:::::.::::::::::::::::::::::::::::::: gi|109 WDSKLIGYGSAAQHLPYLTSLLVLKLLQHCLADAWVAEIGLAFNILGMVVFAFATITPLM 300 310 320 330 340 350 100 110 120 FLJ002 FTG----------------------------ALFSGVACVNSLAMLTASGIFNSLYPATL ::: ::::.:::::.:::::::::::::::::: gi|109 FTGYGLLFLSLVITPVIRAKLSKLVRETEQGALFSAVACVNNLAMLTASGIFNSLYPATL 360 370 380 390 400 410 130 140 150 160 FLJ002 NFMKGFPFLLGAGLLLIPAVLIGMLEKADPHLEFQQFPQSP :::::::::::::::::::::::::::: :: ::::::::: gi|109 NFMKGFPFLLGAGLLLIPAVLIGMLEKAVPHPEFQQFPQSP 420 430 440 450 460 >>gi|19353603|gb|AAH24522.1| Slc46a1 protein [Mus muscul (196 aa) initn: 579 init1: 579 opt: 584 Z-score: 698.2 bits: 135.7 E(): 3.5e-30 Smith-Waterman score: 925; 77.487% identity (84.293% similar) in 191 aa overlap (1-163:6-196) 10 20 30 40 50 FLJ002 LYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGSAAQHLPYLTSLLALK :::::::::.::::::::::::::::.:::::::::::::::::::::::::.:. gi|193 RMHLALYSLAIFVVVTVHFGAQDILTLYELSAPLCWDSKLIGYGSAAQHLPYLTSLLGLR 10 20 30 40 50 60 60 70 80 90 FLJ002 LLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTG---------------------- :::.::::.::::::::::::::::::::::::::::: gi|193 LLQFCLADTWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFLSLVTTPVIRAKLSKLV 70 80 90 100 110 120 100 110 120 130 140 FLJ002 ------ALFSGVACVNSLAMLTASGIFNSLYPATLNFMKGFPFLLGAGLLLIPAVLIGML ::::.:::::::::: :::::::.::::::::::::::::::::.:::.:::.: gi|193 SESEQGALFSAVACVNSLAMLMASGIFNSIYPATLNFMKGFPFLLGAGLLFIPAILIGVL 130 140 150 160 170 180 150 160 FLJ002 EKADPHLEFQQFPQSP ::..:: ::::::::: gi|193 EKVNPHPEFQQFPQSP 190 163 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 23:24:52 2009 done: Fri Feb 27 23:29:05 2009 Total Scan time: 605.700 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]