# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj07825.fasta.huge -Q ../query/FLJ00245.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00245, 167 aa vs ./tmplib.10216 library 2210827 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.6644+/-0.00476; mu= 16.0710+/- 0.321 mean_var=134.3121+/-29.005, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.110667 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1305 ( 1819 res) fh04045s1 (1819) 116 29.4 1 KIAA1306 ( 1154 res) fh05845 (1154) 101 26.7 4.4 FLJ00044 ( 1051 res) as00044 (1051) 97 26.0 6.5 KIAA1760 ( 2219 res) af00030 (2219) 98 26.7 8.5 KIAA0883 ( 373 res) hk07589 ( 373) 88 23.8 10 KIAA1662 ( 1653 res) fj03879s1 (1653) 94 25.8 11 KIAA1142 ( 467 res) hh05864 ( 467) 87 23.8 13 KIAA0053 ( 666 res) ha01417 ( 666) 88 24.2 14 KIAA0557 ( 493 res) hh01334 ( 493) 86 23.7 15 KIAA0685 ( 939 res) hk02959 ( 939) 89 24.6 15 KIAA1715 ( 429 res) hh02382 ( 429) 85 23.5 15 KIAA0947 ( 2330 res) ef03552 (2330) 92 25.8 17 KIAA2011 ( 1091 res) pj02017 (1091) 88 24.6 18 KIAA0194 ( 1435 res) ha02703 (1435) 88 24.8 21 KIAA2038 ( 917 res) pj01991 ( 917) 85 24.0 23 KIAA0495 ( 209 res) hg00106 ( 209) 78 21.8 23 KIAA1816 ( 1162 res) fh16716 (1162) 86 24.3 23 KIAA1748 ( 758 res) pj02084 ( 758) 84 23.7 23 KIAA1019 ( 2309 res) fg00188s1 (2309) 89 25.3 23 KIAA1218 ( 864 res) fh03016 ( 864) 84 23.8 24 KIAA0616 ( 634 res) hg03623 ( 634) 82 23.2 26 KIAA2009 ( 501 res) fj05611 ( 501) 80 22.8 29 FLJ00160 ( 1696 res) sh06621 (1696) 85 24.4 31 FLJ00417 ( 600 res) sj06336 ( 600) 80 22.9 32 KIAA1737 ( 400 res) pj00125 ( 400) 78 22.3 32 KIAA0975 ( 1528 res) hj06890 (1528) 84 24.2 33 KIAA2013 ( 730 res) bm04064 ( 730) 80 23.0 35 FLJ00173 ( 1269 res) sj00667 (1269) 82 23.7 37 KIAA1743 ( 1036 res) pj01380s1 (1036) 81 23.4 37 FLJ00277 ( 357 res) sh01540 ( 357) 76 21.9 37 FLJ00056 ( 1310 res) as00056 (1310) 82 23.8 38 KIAA0940 ( 699 res) hh04894 ( 699) 79 22.8 38 FLJ00092 ( 369 res) as00092 ( 369) 76 21.9 38 KIAA1115 ( 895 res) hk05464 ( 895) 80 23.2 39 KIAA1471 ( 1421 res) fj02383s1 (1421) 82 23.8 39 KIAA0223 ( 1165 res) ha02995 (1165) 81 23.5 40 FLJ00243 ( 503 res) sj07676 ( 503) 77 22.3 40 FLJ00041 ( 330 res) as00041 ( 330) 75 21.7 40 KIAA1332 ( 651 res) fh15405 ( 651) 78 22.6 41 FLJ00128 ( 1546 res) sh01521 (1546) 82 23.9 41 KIAA0400 ( 1022 res) hg01091 (1022) 80 23.3 41 FLJ00237 ( 351 res) sj07406 ( 351) 75 21.7 41 FLJ00393 ( 547 res) sj05490 ( 547) 77 22.3 42 KIAA1443 ( 573 res) hj01820b ( 573) 77 22.4 43 FLJ00248 ( 501 res) sj08681 ( 501) 76 22.1 45 KIAA0676 ( 1262 res) hk02596 (1262) 80 23.4 46 KIAA1453 ( 1123 res) fh14729 (1123) 79 23.2 48 KIAA1150 ( 499 res) hg02066 ( 499) 75 22.0 50 KIAA0819 ( 989 res) hh01037 ( 989) 78 22.9 51 KIAA1029 ( 1015 res) fh00363 (1015) 78 22.9 51 >>KIAA1305 ( 1819 res) fh04045s1 (1819 aa) initn: 94 init1: 71 opt: 116 Z-score: 106.0 bits: 29.4 E(): 1 Smith-Waterman score: 116; 27.826% identity (50.435% similar) in 115 aa overlap (5-115:389-494) 10 20 30 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITG- :. . : ::.. ::. . :: :.: : KIAA13 LGGEAALQNCPRPEISPKVTSLLVVPGSSDVKDKVSSDLPQIGPPLTSTPQLQAGGEPGD 360 370 380 390 400 410 40 50 60 70 80 90 FLJ002 --AMSTEGPSLASSPA-ISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLVFM .:. . .: .:: . : . . ::. : :.. . : . . : : : KIAA13 QGSMQLDFKGLEEGPAPVLPTG-QGKPVAQGGLTDQSVPGAQTVP--------ETLKVPM 420 430 440 450 460 100 110 120 130 140 150 FLJ002 TLCKPAALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLP . : : .::: .. :. : : KIAA13 AAAVPKAENPSRTQVPSAAPKLPTSRMMLAVHTEPAAPEVPLAPTKPTAQLMATAQKTVV 470 480 490 500 510 520 >>KIAA1306 ( 1154 res) fh05845 (1154 aa) initn: 86 init1: 75 opt: 101 Z-score: 94.9 bits: 26.7 E(): 4.4 Smith-Waterman score: 101; 38.710% identity (58.065% similar) in 62 aa overlap (18-76:1000-1059) 10 20 30 40 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSPA ::. .: ..::. .. . ::: : ::: KIAA13 SKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSG--SAGPSPAPSPA 970 980 990 1000 1010 1020 50 60 70 80 90 100 FLJ002 ISPLAFLSAPV-TPGTL--AEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRR .: : :. : :: .: . : : : :: KIAA13 RQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGAS 1030 1040 1050 1060 1070 1080 110 120 130 140 150 160 FLJ002 AHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMES KIAA13 PGDSARQKLEETSACLAAALQAVEEKIRQEDAQGPRDSAAEKSTGSILDDIGSMFDDLAD 1090 1100 1110 1120 1130 1140 >>FLJ00044 ( 1051 res) as00044 (1051 aa) initn: 93 init1: 56 opt: 97 Z-score: 91.8 bits: 26.0 E(): 6.5 Smith-Waterman score: 97; 32.292% identity (51.042% similar) in 96 aa overlap (33-123:438-528) 10 20 30 40 50 FLJ002 LLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSPAISPLAFLSAPV---- : .: .:::: . : .: . .. . FLJ000 LSPHCKPEERAGWLQLLSRWDKLDVCPLEEGNYSFDGPSLQPTMAPAPELLQKGSTCITN 410 420 430 440 450 460 60 70 80 90 100 110 FLJ002 TPGTLAEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRR-AHECMPHHPGSPS : : ... ::. : : :: : : :: : .:. :.. .: ::::. FLJ000 TEGWVGHPLDPIGCL----CRALLEACRLEEETLTLYPDSGPEKRKVAYQHVPV-PGSPG 470 480 490 500 510 520 120 130 140 150 160 FLJ002 EPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMESTKM : : : FLJ000 ESYLVLALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAG 530 540 550 560 570 580 >>KIAA1760 ( 2219 res) af00030 (2219 aa) initn: 123 init1: 57 opt: 98 Z-score: 89.7 bits: 26.7 E(): 8.5 Smith-Waterman score: 100; 32.192% identity (49.315% similar) in 146 aa overlap (18-148:1384-1522) 10 20 30 40 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASS-- ::: . :: :: :..: . . ::. KIAA17 PSFLASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAG 1360 1370 1380 1390 1400 1410 50 60 70 80 90 FLJ002 -PAISPLAFLSAPVTPGTLAEATD-PL---PMLIALA-CIFLLLATCLVFMTLCKPAALD :. .: .. : : :::. . :: :....:: : :. : : . KIAA17 GPG-TPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAAS----TRDASAPRE 1420 1430 1440 1450 1460 100 110 120 130 140 150 FLJ002 PSRRRAHECMPHHPGSPS----EPQLRLWKRLGSLRLS---LHSFRHGRPTVPRQPLPGP : : : :: :.:. .: : .:.. :. : : : :::: :: KIAA17 PLPPPAPEPSPHS-GTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLG-PTVPPQPPSAL 1470 1480 1490 1500 1510 1520 160 FLJ002 EDNRSHCDYMESTKM KIAA17 ESDGEGPPPRVGFVDSTIKSLDEKLRTLLYQEHVPTSSASAGTPVEVGDRDFTLEPLRGD 1530 1540 1550 1560 1570 1580 >>KIAA0883 ( 373 res) hk07589 (373 aa) initn: 53 init1: 53 opt: 88 Z-score: 88.2 bits: 23.8 E(): 10 Smith-Waterman score: 88; 36.364% identity (62.121% similar) in 66 aa overlap (8-72:107-169) 10 20 30 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMST :..: : :. .. . : :..:. :.. KIAA08 ELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQ-TVSGMFRALGQ 80 90 100 110 120 130 40 50 60 70 80 90 FLJ002 EGPSLASSPAISPLAFLSAPVTPGTLAEATDPL-PMLIALACIFLLLATCLVFMTLCKPA :: : :. : ::: : : . ..:.: .:: :: KIAA08 EGVSPATVPCISPE--LLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAPEEESFEVW 140 150 160 170 180 190 100 110 120 130 140 150 FLJ002 ALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNR KIAA08 LEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEAFKQVFGSL 200 210 220 230 240 250 >>KIAA1662 ( 1653 res) fj03879s1 (1653 aa) initn: 150 init1: 64 opt: 94 Z-score: 87.4 bits: 25.8 E(): 11 Smith-Waterman score: 97; 25.714% identity (46.667% similar) in 105 aa overlap (17-120:242-336) 10 20 30 40 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSP :: : ::.. . . ... : . .: KIAA16 PSRSKQSEVPWASIALRPTQGDRPQTSSPSRPAQHDPPQSSFGPTQYNLPSRATSSSHNP 220 230 240 250 260 270 50 60 70 80 90 100 FLJ002 AISPLAFLSAPVTPGTL-AEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRRA . . . :.:: :.. : :.: : : :.:. : : .: : KIAA16 GHQSTSRTSSPVYPAAYGAPLTSPEPSQPP--C-----AVCIGHRD--APRASSPPRYLQ 280 290 300 310 320 110 120 130 140 150 160 FLJ002 HECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMEST :. .: : : :. KIAA16 HDPFPFFP-EPRAPESEPPHHEPPYIPPAVCIGHRDAPRASSPPRHTQFDPFPFLPDTSD 330 340 350 360 370 380 >>KIAA1142 ( 467 res) hh05864 (467 aa) initn: 68 init1: 44 opt: 87 Z-score: 86.5 bits: 23.8 E(): 13 Smith-Waterman score: 87; 35.849% identity (60.377% similar) in 53 aa overlap (17-69:124-172) 10 20 30 40 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSP :::...: : . :. : ..: :.:: : KIAA11 GAPKGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARG-APSPGVLGPHASE-PQLAP-P 100 110 120 130 140 150 50 60 70 80 90 100 FLJ002 AISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRRAH : .: : ..: :: . .: KIAA11 ACTPAAP-AVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTG 160 170 180 190 200 >>KIAA0053 ( 666 res) ha01417 (666 aa) initn: 110 init1: 58 opt: 88 Z-score: 85.9 bits: 24.2 E(): 14 Smith-Waterman score: 88; 29.167% identity (50.833% similar) in 120 aa overlap (39-151:2-115) 10 20 30 40 50 60 FLJ002 ESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSPAISPLAFLSAPVTPGTLAEATD ::. . ::.::: :. : .:. KIAA00 TGPGCRPPASQPPLGFLS-PLRP-LFAHC-- 10 20 70 80 90 100 110 120 FLJ002 PLPMLIAL-ACIFLLLATCLVFMTLCKPAALDPSRRRAHECMPHHPG--SPSEPQLRLWK :: .. ::.:: .: :: . ::. :: : . : . .. .. :. KIAA00 --PMSLGQSACLFLSIARSRSVMTGEQMAAFHPSSTPNPLERPIKMGWLKKQRSIVKNWQ 30 40 50 60 70 80 130 140 150 160 FLJ002 -RLGSLRLS-LHSFRHGRPTVPR--QPLPGPEDNRSHCDYMESTKM : :: . :. .. . : :. . ::: KIAA00 QRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRM 90 100 110 120 130 140 >>KIAA0557 ( 493 res) hh01334 (493 aa) initn: 47 init1: 47 opt: 86 Z-score: 85.4 bits: 23.7 E(): 15 Smith-Waterman score: 86; 25.424% identity (49.153% similar) in 118 aa overlap (36-151:191-305) 10 20 30 40 50 60 FLJ002 ERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPS-LASSPAISPLAF-LSAPVTPGTL : . :. :. : .:: . .: .: KIAA05 VPLGIGGQFLKHQAEAQPEDLSLEEEARFSSQQPPAQLSHRPQRGPLLWPERGPPAP-RH 170 180 190 200 210 70 80 90 100 110 120 FLJ002 AEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRRAHECMPHHPGSPSEPQLRL : .. :.: : . . . : :... .: .::..: : . :: : KIAA05 QEMASASPFLSAWSQVPVNLEDVAVYLSGEEPRCMDPAQRDA-PLENEGPGIQLEDGGD- 220 230 240 250 260 270 130 140 150 160 FLJ002 WKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMESTKM .. . ::. . .: : .:::: KIAA05 GREDAPLRMEWYRVLSARCQGPGHPLPGQRPAPVRGLVRPDQPRGGPPPGRRASHGADKP 280 290 300 310 320 330 >>KIAA0685 ( 939 res) hk02959 (939 aa) initn: 58 init1: 58 opt: 89 Z-score: 85.4 bits: 24.6 E(): 15 Smith-Waterman score: 89; 34.483% identity (58.621% similar) in 58 aa overlap (18-75:869-921) 10 20 30 40 FLJ002 LGLLVERQESEGLPRVRPPVHGRPQATAAGITGAMSTEGPSLASSPA : : :.::.: :: :.: ::.. . :: KIAA06 RTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVA-ITTALSKAGPAIPT-PA 840 850 860 870 880 890 50 60 70 80 90 100 FLJ002 ISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLVFMTLCKPAALDPSRRRAHE .: ...:. : :. : ..: KIAA06 VSSALAVAVPLGP---IMAVTAAPAMVATLGTVTKDGQMPRQKELP 900 910 920 930 167 residues in 1 query sequences 2210827 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:46:54 2009 done: Fri Feb 27 10:46:54 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]