# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj07851.fasta.nr -Q ../query/FLJ00404.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00404, 261 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7821658 sequences Expectation_n fit: rho(ln(x))= 5.5648+/-0.000198; mu= 8.5015+/- 0.011 mean_var=108.8215+/-20.706, 0's: 29 Z-trim: 38 B-trim: 15 in 1/66 Lambda= 0.122947 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748652|dbj|BAC03463.1| FLJ00404 protein [Homo ( 261) 1857 339.3 3.9e-91 >>gi|21748652|dbj|BAC03463.1| FLJ00404 protein [Homo sap (261 aa) initn: 1857 init1: 1857 opt: 1857 Z-score: 1792.3 bits: 339.3 E(): 3.9e-91 Smith-Waterman score: 1857; 100.000% identity (100.000% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 FLJ004 PAESDRLTSSWLQSEVSRDNWAGTPQESVRDWRGKARGWGAADPRPLPAHPPPTAFPLRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PAESDRLTSSWLQSEVSRDNWAGTPQESVRDWRGKARGWGAADPRPLPAHPPPTAFPLRA 10 20 30 40 50 60 70 80 90 100 110 120 FLJ004 RFPQANGLRGPAAHSAGGRAVHGESALCKVRLMPRLEAVRSDAAAQPPLPAKPILSPHPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RFPQANGLRGPAAHSAGGRAVHGESALCKVRLMPRLEAVRSDAAAQPPLPAKPILSPHPR 70 80 90 100 110 120 130 140 150 160 170 180 FLJ004 GALGQARAGCAAQLSGLCHPPGRASAQLRGPQRRGPGRASSRCLPVSSRVHLREAQGPSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GALGQARAGCAAQLSGLCHPPGRASAQLRGPQRRGPGRASSRCLPVSSRVHLREAQGPSE 130 140 150 160 170 180 190 200 210 220 230 240 FLJ004 PHTPPPQLPKHTCRQALLSPAGQALCPRMRAAAKFNLQGPGPLGTVVSRFTGRGLFSFLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PHTPPPQLPKHTCRQALLSPAGQALCPRMRAAAKFNLQGPGPLGTVVSRFTGRGLFSFLS 190 200 210 220 230 240 250 260 FLJ004 LKRNSLRCHRTPMQTKINCCL ::::::::::::::::::::: gi|217 LKRNSLRCHRTPMQTKINCCL 250 260 261 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 01:55:40 2009 done: Sat Feb 28 02:00:58 2009 Total Scan time: 744.050 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]