# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj08819.fasta.nr -Q ../query/FLJ00409.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00409, 210 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827288 sequences Expectation_n fit: rho(ln(x))= 4.8725+/-0.000181; mu= 9.9800+/- 0.010 mean_var=65.2925+/-12.639, 0's: 44 Z-trim: 45 B-trim: 0 in 0/66 Lambda= 0.158724 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748658|dbj|BAC03466.1| FLJ00409 protein [Homo ( 210) 1445 338.9 3.3e-91 gi|89030821|ref|XP_933838.1| PREDICTED: similar to ( 205) 1396 327.7 7.7e-88 gi|114629695|ref|XP_507693.2| PREDICTED: similar t ( 205) 1370 321.7 4.8e-86 >>gi|21748658|dbj|BAC03466.1| FLJ00409 protein [Homo sap (210 aa) initn: 1445 init1: 1445 opt: 1445 Z-score: 1793.7 bits: 338.9 E(): 3.3e-91 Smith-Waterman score: 1445; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:1-210) 10 20 30 40 50 60 FLJ004 CVHITMGFSLSPTWKPEPCLVDLGSGITPYDSEGLILSEREAGQPGCGGNGVPLLMPVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 CVHITMGFSLSPTWKPEPCLVDLGSGITPYDSEGLILSEREAGQPGCGGNGVPLLMPVAV 10 20 30 40 50 60 70 80 90 100 110 120 FLJ004 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP 70 80 90 100 110 120 130 140 150 160 170 180 FLJ004 RPGQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RPGQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA 130 140 150 160 170 180 190 200 210 FLJ004 NKDSARRHFRKVADRWLEAGLGESTAEKHF :::::::::::::::::::::::::::::: gi|217 NKDSARRHFRKVADRWLEAGLGESTAEKHF 190 200 210 >>gi|89030821|ref|XP_933838.1| PREDICTED: similar to FLJ (205 aa) initn: 1396 init1: 1396 opt: 1396 Z-score: 1733.2 bits: 327.7 E(): 7.7e-88 Smith-Waterman score: 1396; 99.512% identity (99.512% similar) in 205 aa overlap (6-210:1-205) 10 20 30 40 50 60 FLJ004 CVHITMGFSLSPTWKPEPCLVDLGSGITPYDSEGLILSEREAGQPGCGGNGVPLLMPVAV :::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|890 MGFSLSPTWKAEPCLVDLGSGITPYDSEGLILSEREAGQPGCGGNGVPLLMPVAV 10 20 30 40 50 70 80 90 100 110 120 FLJ004 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|890 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP 60 70 80 90 100 110 130 140 150 160 170 180 FLJ004 RPGQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|890 RPGQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA 120 130 140 150 160 170 190 200 210 FLJ004 NKDSARRHFRKVADRWLEAGLGESTAEKHF :::::::::::::::::::::::::::::: gi|890 NKDSARRHFRKVADRWLEAGLGESTAEKHF 180 190 200 >>gi|114629695|ref|XP_507693.2| PREDICTED: similar to FL (205 aa) initn: 1370 init1: 1370 opt: 1370 Z-score: 1701.0 bits: 321.7 E(): 4.8e-86 Smith-Waterman score: 1370; 98.049% identity (98.537% similar) in 205 aa overlap (6-210:1-205) 10 20 30 40 50 60 FLJ004 CVHITMGFSLSPTWKPEPCLVDLGSGITPYDSEGLILSEREAGQPGCGGNGVPLLMPVAV ::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|114 MGFSLSPTWKPEPCLVDLGSGITPYDSEGLILSERETGQPGCGGNGVPLLMPVAV 10 20 30 40 50 70 80 90 100 110 120 FLJ004 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FVHLHVTLAEMNATWNPTHRSRLPHAREKTALPVLAWLCVGLYLLTGPQLARALEQLWGP 60 70 80 90 100 110 130 140 150 160 170 180 FLJ004 RPGQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPRQESQLRTRRTEEDGVGKSSSLPYPRPLPASTEGRTAIVPPYLEALICTKLARAEFSA 120 130 140 150 160 170 190 200 210 FLJ004 NKDSARRHFRKVADRWLEAGLGESTAEKHF ::::: :::::::::::::::::::::::: gi|114 NKDSACRHFRKVADRWLEAGLGESTAEKHF 180 190 200 210 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 02:29:05 2009 done: Sat Feb 28 02:33:55 2009 Total Scan time: 688.530 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]