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Gene/Protein Characteristic Table for KIAA0122

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Product ID	ORK00416
Accession No	D50912
Description	RNA binding motif protein 10, transcript variant 1
Clone name	ha03733
Vector information	The cDNA fragment was inserted at the EcoRV-NotI site of the ... The cDNA fragment was inserted at the EcoRV-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the EcoRV (blunt-end ligation) site without using any linker or adapter. The 3' end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (3244 bp) Predicted protein sequence (1010 aa)
HaloTag ORF Clone	FHC00416
Flexi ORF Clone	FXC00416
Source	Myeloblast cell line (KG-1)
Rouge ID	mKIAA0122 by Kazusa Mouse cDNA Project

Length: 3244 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis). Integrity of 3' end

Length: 1010 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000504	212	277	PF00076	RNA recognition motif
	IPR001876	293	323	PF00641	Zinc finger
	IPR000504	383	459	PF00076	RNA recognition motif
	IPR000467	938	982	PF01585	D111/G-patch
HMMSmart	IPR000504	211	286	SM00360	RNA recognition motif
	IPR001876	296	320	SM00547	Zinc finger
	IPR000504	382	460	SM00360	RNA recognition motif
	IPR000467	936	982	SM00443	D111/G-patch
ProfileScan	IPR000504	210	290	PS50102	RNA recognition motif
	IPR001876	293	323	PS50199	Zinc finger
	IPR000504	381	464	PS50102	RNA recognition motif
	IPR007087	839	869	PS50157	Zinc finger
	IPR000467	938	984	PS50174	D111/G-patch
ScanRegExp	IPR001876	298	317	PS01358	Zinc finger

Northern blot

Experimental conditions

Chromosome No. X
Experimental conditions

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