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Gene/Protein Characteristic Table for KIAA0461

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Product ID	ORK01976
Accession No	AB007930
Description	pogo transposable element with ZNF domain
Clone name	hg00867
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (6148 bp) Predicted protein sequence (1355 aa)
HaloTag ORF Clone	FHC01976
Flexi ORF Clone	FXC01976
Source	Human adult brain
Rouge ID	mKIAA0461 by Kazusa Mouse cDNA Project

Length: 6148 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1355 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007087	439	461	PF00096	Zinc finger
	IPR007087	564	586	PF00096	Zinc finger
	IPR015175	961	1024	PF09091	Centromere protein B
	IPR004875	1062	1218	PF03184	CENP-B protein
HMMSmart	IPR015880	439	461	SM00355	Zinc finger
	IPR015880	475	498	SM00355	Zinc finger
	IPR015880	505	528	SM00355	Zinc finger
	IPR015880	535	558	SM00355	Zinc finger
	IPR015880	564	586	SM00355	Zinc finger
	IPR015880	592	614	SM00355	Zinc finger
	IPR015880	716	739	SM00355	Zinc finger
	IPR015880	760	785	SM00355	Zinc finger
	IPR006600	966	1030	SM00674	Centromere protein B
ProfileScan	IPR007087	439	466	PS50157	Zinc finger
	IPR007087	475	503	PS50157	Zinc finger
	IPR006600	960	1030	PS51253	Centromere protein B
ScanRegExp	IPR007087	441	461	PS00028	Zinc finger
	IPR007087	477	498	PS00028	Zinc finger
	IPR007087	507	528	PS00028	Zinc finger
	IPR007087	566	586	PS00028	Zinc finger
	IPR007087	594	615	PS00028	Zinc finger

Experimental conditions

Chromosome No. 1
Experimental conditions

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