Gene/Protein Characteristic Table for KIAA0791
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Product ID ORK01121
Accession No AB018334
Description nucleoporin 155kDa, transcript variant 2
Clone name hk05655
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4200 bp)
Predicted protein sequence (1357 aa)
Flexi ORF Clone FXC01121
Source Human adult brain
Rouge ID mKIAA0791 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4200 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Features of the protein sequence
Description

Length: 1357 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG59644 0 99.9 unnamed protein...
Homo sapiens
O75694 0 99.9 Nuclear pore co...
Homo sapiens
XP_517798 0 99.4 nucleoporin 155...
Pan troglodytes
AAD52966 0 100.0 NUP155 [Homo sa...
Homo sapiens
XP_001094346 0 96.9 similar to nucl...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR004870 2 1350 PF03177 Nucleoporin

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 126 HVRHLLVLATPVDIVILGLSYAN 148 PRIMARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f GAATGAAGAAGCCACTGCACC
Primer_r GTAACCACAAACAGCATCCAG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 5
Experimental conditions
Panel name GeneBridge 4
Primer_f TTTATGGGGAATTTGCTGACC
Primer_r CTCAATGTCACACTGTCACTC
PCR product length 145 (0.5k) bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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