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Gene/Protein Characteristic Table for FLJ00073

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Product ID	ORK05061
Accession No	AK024479
Clone name	as00073
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4325 bp) Predicted protein sequence (462 aa)
Source	Human spleen

Length: 4325 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 462 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007110	87	139	PF00047	Immunoglobulin-like
	IPR007110	173	240	PF00047	Immunoglobulin-like
HMMSmart	IPR003598	2	61	SM00408	Immunoglobulin C-2 type
	IPR003599	11	72	SM00409	Immunoglobulin subtype
	IPR003599	79	156	SM00409	Immunoglobulin subtype
	IPR003598	85	144	SM00408	Immunoglobulin C-2 type
	IPR003599	165	256	SM00409	Immunoglobulin subtype
	IPR003598	171	245	SM00408	Immunoglobulin C-2 type
	IPR003599	263	343	SM00409	Immunoglobulin subtype
	IPR003598	269	331	SM00408	Immunoglobulin C-2 type
	IPR003599	349	444	SM00409	Immunoglobulin subtype
	IPR003598	358	433	SM00408	Immunoglobulin C-2 type
ProfileScan	IPR007110	1	72	PS50835	Immunoglobulin-like
	IPR007110	72	154	PS50835	Immunoglobulin-like
	IPR007110	258	339	PS50835	Immunoglobulin-like
	IPR007110	349	444	PS50835	Immunoglobulin-like

Experimental conditions

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