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Gene/Protein Characteristic Table for FLJ00117

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Product ID	ORK05083
Accession No	AK024507
Clone name	as00117
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4284 bp) Predicted protein sequence (331 aa)
Source	Human spleen

Length: 4284 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 331 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001478	15	96	PF00595	PDZ/DHR/GLGF domain
	IPR001478	114	193	PF00595	PDZ/DHR/GLGF domain
HMMSmart	IPR001478	24	99	SM00228	PDZ/DHR/GLGF domain
	IPR001478	122	196	SM00228	PDZ/DHR/GLGF domain
ProfileScan	IPR001478	15	99	PS50106	PDZ/DHR/GLGF domain
	IPR001478	114	196	PS50106	PDZ/DHR/GLGF domain

Experimental conditions

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