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Gene/Protein Characteristic Table for FLJ00119

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Product ID	ORK05084
Accession No	AK074048
Clone name	as00119
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4689 bp) Predicted protein sequence (1455 aa)
Source	Human spleen

Length: 4689 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1455 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001298	1	62	PF00630	Filamin/ABP280 repeat
	IPR001298	68	162	PF00630	Filamin/ABP280 repeat
	IPR001298	168	255	PF00630	Filamin/ABP280 repeat
	IPR001298	261	352	PF00630	Filamin/ABP280 repeat
	IPR001298	358	449	PF00630	Filamin/ABP280 repeat
	IPR001298	455	545	PF00630	Filamin/ABP280 repeat
	IPR001298	578	665	PF00630	Filamin/ABP280 repeat
	IPR001298	670	757	PF00630	Filamin/ABP280 repeat
	IPR001298	769	844	PF00630	Filamin/ABP280 repeat
	IPR001298	852	939	PF00630	Filamin/ABP280 repeat
	IPR001298	965	1035	PF00630	Filamin/ABP280 repeat
	IPR001298	1043	1130	PF00630	Filamin/ABP280 repeat
	IPR001298	1137	1225	PF00630	Filamin/ABP280 repeat
	IPR001298	1234	1321	PF00630	Filamin/ABP280 repeat
	IPR001298	1362	1451	PF00630	Filamin/ABP280 repeat
ProfileScan	IPR001298	1	65	PS50194	Filamin/ABP280 repeat
	IPR001298	66	165	PS50194	Filamin/ABP280 repeat
	IPR001298	166	258	PS50194	Filamin/ABP280 repeat
	IPR001298	259	355	PS50194	Filamin/ABP280 repeat
	IPR001298	356	452	PS50194	Filamin/ABP280 repeat
	IPR001298	453	548	PS50194	Filamin/ABP280 repeat
	IPR001298	587	668	PS50194	Filamin/ABP280 repeat
	IPR001298	668	760	PS50194	Filamin/ABP280 repeat
	IPR001298	758	847	PS50194	Filamin/ABP280 repeat
	IPR001298	850	942	PS50194	Filamin/ABP280 repeat
	IPR001298	940	1038	PS50194	Filamin/ABP280 repeat
	IPR001298	1041	1133	PS50194	Filamin/ABP280 repeat
	IPR001298	1135	1228	PS50194	Filamin/ABP280 repeat
	IPR001298	1232	1324	PS50194	Filamin/ABP280 repeat
	IPR001298	1360	1454	PS50194	Filamin/ABP280 repeat

Experimental conditions

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