Cloned DNA sequence, length = 3366 bp
Revised DNA sequence, length = 2588 bp
<< Positions of primers used in RT-PCR experiment(s) >>
1 : f NN11273 260 - 280 GCT GTC TGG AGG TGA TGA TAG
r NN11274 1546 - 1526 AAG GTG CAG GAT GAG TTT GTC
<< Positions of inserion/deletion/mutation(s) in the aligned sequence >>
Predicted coding region: colored in green ( 1 - 2586 in the revised sequence).1 : 382 - 1159 778-bp deletion (in the revised sequence)
*- Clone Name -* 1 . . . . . 50
fk03148 1 GGCCGCCGCCTCCTCTTGGAACCCCGTGCGCCCCCCGCGCCCCGCGCCCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1 GGCCGCCGCCTCCTCTTGGAACCCCGTGCGCCCCCCGCGCCCCGCGCCCC 50
51 . . . . . 100
fk03148 51 GGACGCCATGAAGCAGCTGTGTCTGTGCGCAGCCGCCTCCTTCGCGAGTC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 51 GGACGCCATGAAGCAGCTGTGTCTGTGCGCAGCCGCCTCCTTCGCGAGTC 100
101 . . . . . 150
fk03148 101 AAGACTGGGGCAAGAGTGACGAGAGGCTGCTACAAGCCGTGGAAAACAAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 101 AAGACTGGGGCAAGAGTGACGAGAGGCTGCTACAAGCCGTGGAAAACAAC 150
151 . . . . . 200
fk03148 151 GATGCACCTCGGGTGGCCGCCCTCATCGCCCGCAAGGGGCTGGTGCCCAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 151 GATGCACCTCGGGTGGCCGCCCTCATCGCCCGCAAGGGGCTGGTGCCCAC 200
201 . . . . . 250
fk03148 201 GAAGCTAGACCCCGAGGGCAAGTCCGCGTTCCACCTGGCGGCCATGCGGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 201 GAAGCTAGACCCCGAGGGCAAGTCCGCGTTCCACCTGGCGGCCATGCGGG 250
251 . . . . . 300
fk03148 251 GTGCGGCCAGCTGTCTGGAGGTGATGATAGCTCATGGCAGCAATGTCATG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 251 GTGCGGCCAGCTGTCTGGAGGTGATGATAGCTCATGGCAGCAATGTCATG 300
301 . . . . . 350
fk03148 301 AGCACGGACGGGGCAGGTTACAATGCCCTCCACCTGGCCGCCAAATACGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 301 AGCACGGACGGGGCAGGTTACAATGCCCTCCACCTGGCCGCCAAATACGG 350
351 . . . . . 400
fk03148 351 GCACCCACAGTGCTTGAAGCAACTACTGCAGGTCATTTACTGTCTTATCT 400
|||||||||||||||||||||||||||||||
fk03148(revised) 351 GCACCCACAGTGCTTGAAGCAACTACTGCAG------------------- 381
401 . . . . . 450
fk03148 401 CAGCTACTCCCTTGGCCCCTACTACTCCTGAGTTCCAGCAATTCCTTGAA 450
fk03148(revised) 382 -------------------------------------------------- 382
451 . . . . . 500
fk03148 451 CCCCCAGATGCTCTATGAATCCTAGATATTCCTTGGCCCCTTTTACTCCA 500
fk03148(revised) 382 -------------------------------------------------- 382
501 . . . . . 550
fk03148 501 GAACCCTAGCTACTCCCTGGATAACCAGGTACTCTCAGACCATCCACATG 550
fk03148(revised) 382 -------------------------------------------------- 382
551 . . . . . 600
fk03148 551 CTTCTCCTATTTAAGATGTACTCCCAAGCCAGGCGCGGTGGCTCACGCCT 600
fk03148(revised) 382 -------------------------------------------------- 382
601 . . . . . 650
fk03148 601 GTAATCCCAGCACTTTGGGAGGCTGAGGTTGGTGAAATCGCCTGAGGTCA 650
fk03148(revised) 382 -------------------------------------------------- 382
651 . . . . . 700
fk03148 651 GGAGTTCGAGACCAGCCTGGCCAACACAGTGAAACCCCGTCTCTACTAAA 700
fk03148(revised) 382 -------------------------------------------------- 382
701 . . . . . 750
fk03148 701 AATACAAAAAATTAGCTGGGAGTGGTGGTGTGTGCCTGTAATCTCAGCTA 750
fk03148(revised) 382 -------------------------------------------------- 382
751 . . . . . 800
fk03148 751 CTAGGGAGGCTGAGGCAGGAGAATCCCTTGAACTTGGGAGGCGGAGGTTG 800
fk03148(revised) 382 -------------------------------------------------- 382
801 . . . . . 850
fk03148 801 CAGTGAGCCGAGATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCGA 850
fk03148(revised) 382 -------------------------------------------------- 382
851 . . . . . 900
fk03148 851 AACACCATCTAAAATATATATATATACTCCCAATGCCAGGTATTTCCTGA 900
fk03148(revised) 382 -------------------------------------------------- 382
901 . . . . . 950
fk03148 901 GCTCTGTTTCTCCCCAAGCCCTGGGTCCTTCCTTAGCCCCAGACACTCCC 950
fk03148(revised) 382 -------------------------------------------------- 382
951 . . . . . 1000
fk03148 951 AGAGTTCCCAGCCACTCCTCAAATTCCCAGCTGCTTCTCAGCTCTCAGCT 1000
fk03148(revised) 382 -------------------------------------------------- 382
1001 . . . . . 1050
fk03148 1001 ATTTTCTTTTCTCACCAATTTTCATGAAAATGGAGTCCCTTGGGGGCCAC 1050
fk03148(revised) 382 -------------------------------------------------- 382
1051 . . . . . 1100
fk03148 1051 GGAAGGGTGAGGCTGAAGTATAGCAGAGCCCAGGGTGGGGAAGGCAGTCC 1100
fk03148(revised) 382 -------------------------------------------------- 382
1101 . . . . . 1150
fk03148 1101 TAGAGAAATCAGGCAGCAAGAAGGATGGCTCCGCCTCAAAGGACTCGCCC 1150
fk03148(revised) 382 -------------------------------------------------- 382
1151 . . . . . 1200
fk03148 1151 CATCCCCAGGCTTCCTGCGTGGTGGACGTCGTGGACAGCAGCGGGTGGAC 1200
|||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 382 ---------GCTTCCTGCGTGGTGGACGTCGTGGACAGCAGCGGGTGGAC 422
1201 . . . . . 1250
fk03148 1201 TGCCCTACACCATGCAGCGGCTGGTGGCTGTCTCTCCTGCTCAGAGGTGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 423 TGCCCTACACCATGCAGCGGCTGGTGGCTGTCTCTCCTGCTCAGAGGTGC 472
1251 . . . . . 1300
fk03148 1251 TCTGCTCCTTTAAGGCACATCTAAACCCCCAAGATCGGTCAGGCGCAACA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 473 TCTGCTCCTTTAAGGCACATCTAAACCCCCAAGATCGGTCAGGCGCAACA 522
1301 . . . . . 1350
fk03148 1301 CCCCTCATTATAGCAGCTCAGATGTGTCACACAGACCTGTGCCGTCTCCT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 523 CCCCTCATTATAGCAGCTCAGATGTGTCACACAGACCTGTGCCGTCTCCT 572
1351 . . . . . 1400
fk03148 1351 ACTGCAGCAAGGGGCTGCCGCGAACGATCAGGACCTGCAAGGCAGGACGG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 573 ACTGCAGCAAGGGGCTGCCGCGAACGATCAGGACCTGCAAGGCAGGACGG 622
1401 . . . . . 1450
fk03148 1401 CCCTGATGCTGGCCTGTGAGGGGGCCAGCCCCGAAACAGTGGAGGTCCTG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 623 CCCTGATGCTGGCCTGTGAGGGGGCCAGCCCCGAAACAGTGGAGGTCCTG 672
1451 . . . . . 1500
fk03148 1451 CTGCAGGGCGGAGCCCAGCCGGGCATCACCGATGCGCTGGGGCAGGACGC 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 673 CTGCAGGGCGGAGCCCAGCCGGGCATCACCGATGCGCTGGGGCAGGACGC 722
1501 . . . . . 1550
fk03148 1501 GGCTCACTATGGCGCCCTGGCGGGGGACAAACTCATCCTGCACCTTCTGC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 723 GGCTCACTATGGCGCCCTGGCGGGGGACAAACTCATCCTGCACCTTCTGC 772
1551 . . . . . 1600
fk03148 1551 AAGAGGCGGCCCAGCGCCCCTCCCCACCCAGCGCCCTCACAGAGGATGAT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 773 AAGAGGCGGCCCAGCGCCCCTCCCCACCCAGCGCCCTCACAGAGGATGAT 822
1601 . . . . . 1650
fk03148 1601 TCAGGCGAGGCGTCATCTCAGAACTCTATGTCCAGCCATGGAAAGCAGGG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 823 TCAGGCGAGGCGTCATCTCAGAACTCTATGTCCAGCCATGGAAAGCAGGG 872
1651 . . . . . 1700
fk03148 1651 GGCCCCCAAGAAGCGGAAGGCGCCTCCACCTCCCGCCAGCATTCCCATGC 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 873 GGCCCCCAAGAAGCGGAAGGCGCCTCCACCTCCCGCCAGCATTCCCATGC 922
1701 . . . . . 1750
fk03148 1701 CGGATGATCGAGATGCCTATGAGGAGATCGTGAGGCTGCGGCAGGAGAGG 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 923 CGGATGATCGAGATGCCTATGAGGAGATCGTGAGGCTGCGGCAGGAGAGG 972
1751 . . . . . 1800
fk03148 1751 GGCCGCCTCCTGCAGAAGATCCGGGGCCTGGAACAGCACAAGGAACAGAG 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 973 GGCCGCCTCCTGCAGAAGATCCGGGGCCTGGAACAGCACAAGGAACAGAG 1022
1801 . . . . . 1850
fk03148 1801 GCAGCAGGAGTCCCCGGAGGCCAGCTCCCTGCACATCCTGGAGAGACAGG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1023 GCAGCAGGAGTCCCCGGAGGCCAGCTCCCTGCACATCCTGGAGAGACAGG 1072
1851 . . . . . 1900
fk03148 1851 TGCAAGAGCTACAGCAGTTGCTGGTGGAGAGACAAGAGGAGAAGGAGAGC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1073 TGCAAGAGCTACAGCAGTTGCTGGTGGAGAGACAAGAGGAGAAGGAGAGC 1122
1901 . . . . . 1950
fk03148 1901 CTGGGACGGGAGGTGGAGAGTTTGCAGAGCCGGCTGTCCCTGCTGGAGAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1123 CTGGGACGGGAGGTGGAGAGTTTGCAGAGCCGGCTGTCCCTGCTGGAGAA 1172
1951 . . . . . 2000
fk03148 1951 CGAGCGGGAGAATACTAGCTATGACGTAACCACCCTGCAGGATGAGGAGG 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1173 CGAGCGGGAGAATACTAGCTATGACGTAACCACCCTGCAGGATGAGGAGG 1222
2001 . . . . . 2050
fk03148 2001 GTGAGCTGCCTGACCTTCCAGGGGCCGAGGTGCTGCTGTCCAGACAACTC 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1223 GTGAGCTGCCTGACCTTCCAGGGGCCGAGGTGCTGCTGTCCAGACAACTC 1272
2051 . . . . . 2100
fk03148 2051 AGTCCGTCGGCCCAGGAACACCTGGCCTCGCTGCAGGAACAGGTGGCTGT 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1273 AGTCCGTCGGCCCAGGAACACCTGGCCTCGCTGCAGGAACAGGTGGCTGT 1322
2101 . . . . . 2150
fk03148 2101 GCTCACCAGACAGAACCAGGAACTGATGGAGAAGGTCCAGATCCTGGAGA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1323 GCTCACCAGACAGAACCAGGAACTGATGGAGAAGGTCCAGATCCTGGAGA 1372
2151 . . . . . 2200
fk03148 2151 ACTTTGAGAAGGACGAGACACAGATGGAAGTGGAAGCTTTGGCAGAGGTC 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1373 ACTTTGAGAAGGACGAGACACAGATGGAAGTGGAAGCTTTGGCAGAGGTC 1422
2201 . . . . . 2250
fk03148 2201 ATCCCTCTTGCCCTCTATGACTCTCTCCGGGCCGAGTTTGACCAGCTACG 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1423 ATCCCTCTTGCCCTCTATGACTCTCTCCGGGCCGAGTTTGACCAGCTACG 1472
2251 . . . . . 2300
fk03148 2251 CAGGCAGCACGCTGAGGCCCTGCAGGCCCTGAGGCAGCAGGAGACACGAG 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1473 CAGGCAGCACGCTGAGGCCCTGCAGGCCCTGAGGCAGCAGGAGACACGAG 1522
2301 . . . . . 2350
fk03148 2301 AGGTCCCCAGAGAAGAGGGGGCAGCCTGTGGGGAGAGTGAGGTTGCTGGA 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1523 AGGTCCCCAGAGAAGAGGGGGCAGCCTGTGGGGAGAGTGAGGTTGCTGGA 1572
2351 . . . . . 2400
fk03148 2351 GCCACGGCCACCAAAAACGGGCCAACCCACATGGAGCTAAATGGCTCAGT 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1573 GCCACGGCCACCAAAAACGGGCCAACCCACATGGAGCTAAATGGCTCAGT 1622
2401 . . . . . 2450
fk03148 2401 GGCTCCAGAAACCAAAGTTAACGGAGCCGAGACCATAGATGAGGAGGCTG 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1623 GGCTCCAGAAACCAAAGTTAACGGAGCCGAGACCATAGATGAGGAGGCTG 1672
2451 . . . . . 2500
fk03148 2451 CAGGAGATGAAACCATGGAAGCCAGGACTATGGAAGCTGAGGCCACGGGA 2500
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1673 CAGGAGATGAAACCATGGAAGCCAGGACTATGGAAGCTGAGGCCACGGGA 1722
2501 . . . . . 2550
fk03148 2501 GCCAAGGCCACGGGAGCTGAGGCCACAGGAGCCAAGGTCACAGAAACAAA 2550
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1723 GCCAAGGCCACGGGAGCTGAGGCCACAGGAGCCAAGGTCACAGAAACAAA 1772
2551 . . . . . 2600
fk03148 2551 ACCCACAGGGGCTGAGGTCAGAGAAATGGAGACCACAGAAGAAGAAGCAA 2600
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1773 ACCCACAGGGGCTGAGGTCAGAGAAATGGAGACCACAGAAGAAGAAGCAA 1822
2601 . . . . . 2650
fk03148 2601 ACATGGAAACTAAGCCCACAGGAGCTCAGGCCACAGACACAGAGACCACG 2650
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1823 ACATGGAAACTAAGCCCACAGGAGCTCAGGCCACAGACACAGAGACCACG 1872
2651 . . . . . 2700
fk03148 2651 GGAGTGGAGGCCATGGGGGTGGAGGCCACAAAAACAAAAGCAGAGGAAGC 2700
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1873 GGAGTGGAGGCCATGGGGGTGGAGGCCACAAAAACAAAAGCAGAGGAAGC 1922
2701 . . . . . 2750
fk03148 2701 AGAAATGCAGGCCTACGGAGTGGGTGCTGGGCAAGCAGAGCCCCCAGTCA 2750
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1923 AGAAATGCAGGCCTACGGAGTGGGTGCTGGGCAAGCAGAGCCCCCAGTCA 1972
2751 . . . . . 2800
fk03148 2751 CAGGGACCACAAACATGGAGGCCACGGGCTCTAGGGCCACAGGGATGGAA 2800
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 1973 CAGGGACCACAAACATGGAGGCCACGGGCTCTAGGGCCACAGGGATGGAA 2022
2801 . . . . . 2850
fk03148 2801 GCCACAGGAGTCAGTGCCACAGGTGTGGAGAACCCAGGGGTAGAGGCCAC 2850
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2023 GCCACAGGAGTCAGTGCCACAGGTGTGGAGAACCCAGGGGTAGAGGCCAC 2072
2851 . . . . . 2900
fk03148 2851 GGTCCCGGGGATCTCTGCTGGCCCCATCCTACATCCTGGTGCCGCAGAGG 2900
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2073 GGTCCCGGGGATCTCTGCTGGCCCCATCCTACATCCTGGTGCCGCAGAGG 2122
2901 . . . . . 2950
fk03148 2901 CCTCGGAAAAGCTTCAAGTAGAGCTGGAGACCAGGATCCGTGGCTTGGAG 2950
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2123 CCTCGGAAAAGCTTCAAGTAGAGCTGGAGACCAGGATCCGTGGCTTGGAG 2172
2951 . . . . . 3000
fk03148 2951 GAGGCTCTCCGGCAGCGGGAGCGGGAGGCAGCTGCGGAGCTGGAGGCGGC 3000
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2173 GAGGCTCTCCGGCAGCGGGAGCGGGAGGCAGCTGCGGAGCTGGAGGCGGC 2222
3001 . . . . . 3050
fk03148 3001 CCTGGGGAAGTGCGAGGCCGCGGAGGCCGAGGCAGGCCGGCTGCGAGAGC 3050
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2223 CCTGGGGAAGTGCGAGGCCGCGGAGGCCGAGGCAGGCCGGCTGCGAGAGC 2272
3051 . . . . . 3100
fk03148 3051 GTGTCCGCGAGGCCGAGGGCAGCGGGGCCAGCGGGGGCGGTGGCGGTGAC 3100
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2273 GTGTCCGCGAGGCCGAGGGCAGCGGGGCCAGCGGGGGCGGTGGCGGTGAC 2322
3101 . . . . . 3150
fk03148 3101 ACCACACAGCTGCGGGCGGCCCTGGAGCAGGCCCGGGAGGACCTCCGAGA 3150
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2323 ACCACACAGCTGCGGGCGGCCCTGGAGCAGGCCCGGGAGGACCTCCGAGA 2372
3151 . . . . . 3200
fk03148 3151 CCGGGACTCCCGCCTGCGGGAGCTGGAGGCAGCCTCGGCCTGCCTGGATG 3200
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2373 CCGGGACTCCCGCCTGCGGGAGCTGGAGGCAGCCTCGGCCTGCCTGGATG 2422
3201 . . . . . 3250
fk03148 3201 AGGCTCGGGCCAGCCGGCTGCTGGCGGAGGAGGAGGCGCGGGGCCTGCGG 3250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2423 AGGCTCGGGCCAGCCGGCTGCTGGCGGAGGAGGAGGCGCGGGGCCTGCGG 2472
3251 . . . . . 3300
fk03148 3251 GCCGAGCTGGCCCAGCGGGAGGAGGCGCGGCTGGAGCAGAGCCGGGAGCT 3300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2473 GCCGAGCTGGCCCAGCGGGAGGAGGCGCGGCTGGAGCAGAGCCGGGAGCT 2522
3301 . . . . . 3350
fk03148 3301 GGAGGTTCTGCGGGAGCAGCTGGCCACGGCCAGGGCCACGGGGGAGCAGC 3350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03148(revised) 2523 GGAGGTTCTGCGGGAGCAGCTGGCCACGGCCAGGGCCACGGGGGAGCAGC 2572
3351 . 3366
fk03148 3351 AGCGCACGGCGGCCGC 3366
||||||||||||||||
fk03148(revised) 2573 AGCGCACGGCGGCCGC 2588