Comparison between the cloned and the revised DNA sequences

Cloned DNA sequence, length = 5478 bp
Revised DNA sequence, length = 3217 bp

<< Positions of primers used in RT-PCR experiment(s) >>

 1 : f NN05391  1127 -  1147     TTC CAC AAG CAG AGG CGG TCC
     r NN05392  2843 -  2823     CGT TAA ACA CCA GCG GCA CTT
 2 : f NN05393  3087 -  3107     CAC ACA CCA TCT CCA TCT CCG
     r NN05394  4679 -  4659     TTA AGA GGC GAG GGC TGA AAT
<< Positions of inserion/deletion/mutation(s) in the aligned sequence >>
 1 :  1452 -  1462       11-bp deletion  (in the revised sequence)
 2 :  1746 -  2748     1003-bp deletion  (in the revised sequence)
 3 :  3268 -  4514     1247-bp deletion  (in the revised sequence)
 4 :  4556 -  4556        1-bp mutation  (in the revised sequence)
Predicted coding region: colored in green ( 2 - 3097 in the revised sequence).


*- Clone Name -*      1          .         .         .         .         . 50
hh03711               1 GCACAAAATGTGTGAGGATGACAGCCGCTCGTACGCCAGCTCATTCTCTG 50
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)      1 GCACAAAATGTGTGAGGATGACAGCCGCTCGTACGCCAGCTCATTCTCTG 50

                     51          .         .         .         .         . 100
hh03711              51 GATATTCAACAAATACAAAGTATGACCCACACCAAATTAAAGCAGAAATA 100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)     51 GATATTCAACAAATACAAAGTATGACCCACACCAAATTAAAGCAGAAATA 100

                    101          .         .         .         .         . 150
hh03711             101 GCAAGTCGTCGGGATAGGCTTTCCAGATTAAAACGAGAGCTGACCCAGAT 150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    101 GCAAGTCGTCGGGATAGGCTTTCCAGATTAAAACGAGAGCTGACCCAGAT 150

                    151          .         .         .         .         . 200
hh03711             151 GAAGCAGGAACTGCAGTACAAAGAAAAGGGGGTGGAGACCCTGCAAGAGA 200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    151 GAAGCAGGAACTGCAGTACAAAGAAAAGGGGGTGGAGACCCTGCAAGAGA 200

                    201          .         .         .         .         . 250
hh03711             201 TTGATCGGAAGATGTCAAGTACTCACACCAGCTACAAACTGGATGAGGCG 250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    201 TTGATCGGAAGATGTCAAGTACTCACACCAGCTACAAACTGGATGAGGCG 250

                    251          .         .         .         .         . 300
hh03711             251 CAGGCTATCATGAGTGAGCTCCGGACCATCAAGAAGGCCATTTGCACAGG 300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    251 CAGGCTATCATGAGTGAGCTCCGGACCATCAAGAAGGCCATTTGCACAGG 300

                    301          .         .         .         .         . 350
hh03711             301 CGAGAAGGAGAGGCGGGACCTGATGCATAGCCTGGCCAAGCTGACCGATA 350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    301 CGAGAAGGAGAGGCGGGACCTGATGCATAGCCTGGCCAAGCTGACCGATA 350

                    351          .         .         .         .         . 400
hh03711             351 GCTTCAAGAACAGCTGCTCCGTTACCGACTCTCTAGTGGACTTCCCTCAC 400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    351 GCTTCAAGAACAGCTGCTCCGTTACCGACTCTCTAGTGGACTTCCCTCAC 400

                    401          .         .         .         .         . 450
hh03711             401 CATGTAGGCGTGCCTGGCGATGCTGGTGTACCCCAGCAGTTCTGCGATGC 450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    401 CATGTAGGCGTGCCTGGCGATGCTGGTGTACCCCAGCAGTTCTGCGATGC 450

                    451          .         .         .         .         . 500
hh03711             451 CGGCTCCCAGACTGATATCATCGGGGAGTTTGTCTTTGATGATAAAACAA 500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    451 CGGCTCCCAGACTGATATCATCGGGGAGTTTGTCTTTGATGATAAAACAA 500

                    501          .         .         .         .         . 550
hh03711             501 GACTTGTAGACCGAGTCAGACTTAATTGGCAATATGAAGAAGCCAGAAAG 550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    501 GACTTGTAGACCGAGTCAGACTTAATTGGCAATATGAAGAAGCCAGAAAG 550

                    551          .         .         .         .         . 600
hh03711             551 AGAGTCGCCAACATCCAGCAGCAGCTGGCCCGGCTTGACAATGAGTCCTG 600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    551 AGAGTCGCCAACATCCAGCAGCAGCTGGCCCGGCTTGACAATGAGTCCTG 600

                    601          .         .         .         .         . 650
hh03711             601 GCCAAGCACGGCCGAGGCTGACAGGGACCGGCTGCAGCTCATCAAGGAGA 650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    601 GCCAAGCACGGCCGAGGCTGACAGGGACCGGCTGCAGCTCATCAAGGAGA 650

                    651          .         .         .         .         . 700
hh03711             651 AGGAGGCCCTGCTGCAGGAGCTTCAGCTCATCATTGCACAGCGCCGCTCT 700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    651 AGGAGGCCCTGCTGCAGGAGCTTCAGCTCATCATTGCACAGCGCCGCTCT 700

                    701          .         .         .         .         . 750
hh03711             701 GCGGGAGATGTGGCCCGGCTGGAGGAGGAGCGGGAGCGCCTAGAGGAGGA 750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    701 GCGGGAGATGTGGCCCGGCTGGAGGAGGAGCGGGAGCGCCTAGAGGAGGA 750

                    751          .         .         .         .         . 800
hh03711             751 GCTGCGGCGTGCACGGGCCACCTCCGCACAGGGCGCCACGGAGAGGATTC 800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    751 GCTGCGGCGTGCACGGGCCACCTCCGCACAGGGCGCCACGGAGAGGATTC 800

                    801          .         .         .         .         . 850
hh03711             801 TGCTTCAGGAAAAAAGGAATTGTCTACTTATGCAGCTGGAAGAAGCCACC 850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    801 TGCTTCAGGAAAAAAGGAATTGTCTACTTATGCAGCTGGAAGAAGCCACC 850

                    851          .         .         .         .         . 900
hh03711             851 CGCTTAACATCCTACCTCCAGTCCCAGTTAAAAAGCCTGTGTGCCAGCAC 900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    851 CGCTTAACATCCTACCTCCAGTCCCAGTTAAAAAGCCTGTGTGCCAGCAC 900

                    901          .         .         .         .         . 950
hh03711             901 CCTGACGGTGTCCTCGGGGAGCAGCCGCGGGTCCCTAGCCTCCAGCCGTG 950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    901 CCTGACGGTGTCCTCGGGGAGCAGCCGCGGGTCCCTAGCCTCCAGCCGTG 950

                    951          .         .         .         .         . 1000
hh03711             951 GGTCTCTGGCCTCCAGCCGGGGCTCCCTGAGCTCGGTCAGCTTCACGGAC 1000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)    951 GGTCTCTGGCCTCCAGCCGGGGCTCCCTGAGCTCGGTCAGCTTCACGGAC 1000

                   1001          .         .         .         .         . 1050
hh03711            1001 ATCTACGGCCTCCCGCAGTACGAGAAGCCCGACGCTGAGGGCAGCCAGCT 1050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1001 ATCTACGGCCTCCCGCAGTACGAGAAGCCCGACGCTGAGGGCAGCCAGCT 1050

                   1051          .         .         .         .         . 1100
hh03711            1051 TCTACGCTTCGACCTCATTCCCTTCGACTCTCTGGGGCGAGATGCTCCCT 1100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1051 TCTACGCTTCGACCTCATTCCCTTCGACTCTCTGGGGCGAGATGCTCCCT 1100

                   1101          .         .         .         .         . 1150
hh03711            1101 TTTCAGAGCCCCCAGGCCCCTCGGGCTTCCACAAGCAGAGGCGGTCCCTG 1150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1101 TTTCAGAGCCCCCAGGCCCCTCGGGCTTCCACAAGCAGAGGCGGTCCCTG 1150

                   1151          .         .         .         .         . 1200
hh03711            1151 GACACGCCCCAGTCCCTGGCATCGCTGTCCTCCCGCTCCTCGCTGTCCTC 1200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1151 GACACGCCCCAGTCCCTGGCATCGCTGTCCTCCCGCTCCTCGCTGTCCTC 1200

                   1201          .         .         .         .         . 1250
hh03711            1201 GCTGTCGCCCCCAAGCTCGCCCCTGGACACGCCCTTCCTCCCTGCCTCAC 1250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1201 GCTGTCGCCCCCAAGCTCGCCCCTGGACACGCCCTTCCTCCCTGCCTCAC 1250

                   1251          .         .         .         .         . 1300
hh03711            1251 GGGACTCGCCGCTGGCGCAGCTGGCGGACAGCTGTGAGGGGCCAGGCCTG 1300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1251 GGGACTCGCCGCTGGCGCAGCTGGCGGACAGCTGTGAGGGGCCAGGCCTG 1300

                   1301          .         .         .         .         . 1350
hh03711            1301 GGCGCCCTAGACAGACTGCGGGCACACGCCTCGGCTATGGGGGACGAAGA 1350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1301 GGCGCCCTAGACAGACTGCGGGCACACGCCTCGGCTATGGGGGACGAAGA 1350

                   1351          .         .         .         .         . 1400
hh03711            1351 CTTACCAGGCATGGCGGCCCTTCAGCCACACGGGGTCCCCGGGGACGGGG 1400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1351 CTTACCAGGCATGGCGGCCCTTCAGCCACACGGGGTCCCCGGGGACGGGG 1400

                   1401          .         .         .         .         . 1450
hh03711            1401 AAGGGCCGCACGAGCGAGGACCCCCACCAGCCAGCGCTCCCGTGGGTGGA 1450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1401 AAGGGCCGCACGAGCGAGGACCCCCACCAGCCAGCGCTCCCGTGGGTGGA 1450

                   1451          .         .         .         .         . 1500
hh03711            1451 AAAGTGCTCACTCAGTGACTCTTCGAGAAGACAGTGCCAAGAGGTTGGAG 1500
                        |           ||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1451 A-----------CAGTGACTCTTCGAGAAGACAGTGCCAAGAGGTTGGAG 1489

                   1501          .         .         .         .         . 1550
hh03711            1501 AGGAGGGCACGCCGCATCTCCGCATGTCTGTCGGATTATTCGCTAGCCAG 1550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1490 AGGAGGGCACGCCGCATCTCCGCATGTCTGTCGGATTATTCGCTAGCCAG 1539

                   1551          .         .         .         .         . 1600
hh03711            1551 CGACAGTGGGGTGTTTGAACCTCTAACCAAAAGGAACGAAGATGCCGAGG 1600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1540 CGACAGTGGGGTGTTTGAACCTCTAACCAAAAGGAACGAAGATGCCGAGG 1589

                   1601          .         .         .         .         . 1650
hh03711            1601 AGCCTGCCTACGGAGACACGGCCAGTAACGGAGATCCCCAGATCCACGTG 1650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1590 AGCCTGCCTACGGAGACACGGCCAGTAACGGAGATCCCCAGATCCACGTG 1639

                   1651          .         .         .         .         . 1700
hh03711            1651 GGACTCCTGCGCGACAGTGGCAGCGAGTGTCTCCTCGTGCACGTGCTGCA 1700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1640 GGACTCCTGCGCGACAGTGGCAGCGAGTGTCTCCTCGTGCACGTGCTGCA 1689

                   1701          .         .         .         .         . 1750
hh03711            1701 GCTGAAGAACCCGGCGGGGCTGGCGGTGAAGGAAGACTGCAAAGTGTAAG 1750
                        |||||||||||||||||||||||||||||||||||||||||||||     
hh03711(revised)   1690 GCTGAAGAACCCGGCGGGGCTGGCGGTGAAGGAAGACTGCAAAGT----- 1734

                   1751          .         .         .         .         . 1800
hh03711            1751 CCAGGCCCCAGGGCAGTGGCCAGCCAGCCACATGGCTGAGGAGGGAAAAG 1800
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   1801          .         .         .         .         . 1850
hh03711            1801 ACAGTTTGGGAGCCTGAATTTCCAGGAAAGCACCAGGGAGTGTGTGTCTG 1850
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   1851          .         .         .         .         . 1900
hh03711            1851 AAGTGTAAAGTCTTCAAAAGAGTCTAGTGAATGATTTGAGGCTGGTGAAG 1900
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   1901          .         .         .         .         . 1950
hh03711            1901 GTGCCGGTGCTGGTGGCAAGCTAGTGTGTGCCGTGTTGGCGTGGAGGAAG 1950
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   1951          .         .         .         .         . 2000
hh03711            1951 CACTTGCCTGTGCCGTACAGGACTGCATCCTCCTGGCCCGGGGATGGGGT 2000
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2001          .         .         .         .         . 2050
hh03711            2001 TGCTGATGTCGTCGTGCTCTGCTCTGTGATCTTGGGAGACCTCTGGCTGG 2050
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2051          .         .         .         .         . 2100
hh03711            2051 GACCAGGGCATCCTTGACTGAGCGGGGAGGAGGAAATAGGCATTGGGAGC 2100
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2101          .         .         .         .         . 2150
hh03711            2101 AGCTGGTGACTTTGGCCTCGATCGTGGGAGCGCTGCCTCTCTGAGCTCCG 2150
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2151          .         .         .         .         . 2200
hh03711            2151 TGGCCCCAGATGGGGGCCTGATGGAGGGTCCCACTTACCCAAGCAGGTGA 2200
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2201          .         .         .         .         . 2250
hh03711            2201 CCATGCCTGTAATGGTCTGTTCAAGTCGCAGGGTGGGGCCCCTTTGGTGA 2250
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2251          .         .         .         .         . 2300
hh03711            2251 GTCTTCTAAAGGCCTCAGGATCCCTGAGTGTGAGCAGCTGGGGGCTCGGC 2300
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2301          .         .         .         .         . 2350
hh03711            2301 TGGGGTTCGGCCACCCCAATGACCTCTGCAGTGCTCACAGATGGCTCAGC 2350
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2351          .         .         .         .         . 2400
hh03711            2351 CCCTCCCATGTGCCAGACTTGGGGCAGGGAGGGTGGGAAATACGGGCTAC 2400
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2401          .         .         .         .         . 2450
hh03711            2401 CCCATGGGTGATGGGCAGAGAAAGCAGTGGGGGAGCCATGCAGAAAAACC 2450
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2451          .         .         .         .         . 2500
hh03711            2451 AGAGGGGCGATTCCCAAAAAGGTGGGGAGCAGCAGGGCCTGGAAGCATCC 2500
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2501          .         .         .         .         . 2550
hh03711            2501 GCTGCTTCAGTCCTGGCTTGGAAGTCATCCTCCTTGTGAGTGACTTCCCC 2550
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2551          .         .         .         .         . 2600
hh03711            2551 CATCCCTGGGGTACATCGTTCTATGCTTAGTTGAGAAAGGAACTTTTTGC 2600
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2601          .         .         .         .         . 2650
hh03711            2601 AAAGGACTCTGAGACTGTAGCCACAGCTGCCCAAAGGGGGCTGCACGTGG 2650
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2651          .         .         .         .         . 2700
hh03711            2651 GGGGTCTGTGCGCATTGTGTAGGTCGCGCCTGCTCTGGGACTGCGCCATC 2700
                                                                          
hh03711(revised)   1735 -------------------------------------------------- 1735

                   2701          .         .         .         .         . 2750
hh03711            2701 TGTGAGCGCCGCCTGCACGCGCTCTTCCCTCCCCCGTTCTGTTTGCAGCC 2750
                                                                        ||
hh03711(revised)   1735 ------------------------------------------------CC 1736

                   2751          .         .         .         .         . 2800
hh03711            2751 ACATCCGAGTCTATTTGCCCCCACTGGACTCGGGCACGCCCAACACTTAC 2800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1737 ACATCCGAGTCTATTTGCCCCCACTGGACTCGGGCACGCCCAACACTTAC 1786

                   2801          .         .         .         .         . 2850
hh03711            2801 TGCTCCAAGGCTCTGGAGTTCCAAGTGCCGCTGGTGTTTAACGAAGTGTT 2850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1787 TGCTCCAAGGCTCTGGAGTTCCAAGTGCCGCTGGTGTTTAACGAAGTGTT 1836

                   2851          .         .         .         .         . 2900
hh03711            2851 CAGAATCCCCGTGCATTCCAGCGCGTTGACACTGAAGTCACTTCAGTTAT 2900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1837 CAGAATCCCCGTGCATTCCAGCGCGTTGACACTGAAGTCACTTCAGTTAT 1886

                   2901          .         .         .         .         . 2950
hh03711            2901 ACGTGTGTTCAGTGACTCCGCAGCTGCAGGAAGAACTGCTGGGCATTGCT 2950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1887 ACGTGTGTTCAGTGACTCCGCAGCTGCAGGAAGAACTGCTGGGCATTGCT 1936

                   2951          .         .         .         .         . 3000
hh03711            2951 CAGATTAACCTGGCTGACTATGACAGTTTGAGTGAGATGCAGCTGCGCTG 3000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1937 CAGATTAACCTGGCTGACTATGACAGTTTGAGTGAGATGCAGCTGCGCTG 1986

                   3001          .         .         .         .         . 3050
hh03711            3001 GCATTCCGTGCAGGTGTTCACCAGCTCTGAACCATCAAGGACGCGGGAGG 3050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   1987 GCATTCCGTGCAGGTGTTCACCAGCTCTGAACCATCAAGGACGCGGGAGG 2036

                   3051          .         .         .         .         . 3100
hh03711            3051 CTGGGTGTGCAGGAGAGAGCTCCGCCCGGGACCCTGCACACACCATCTCC 3100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2037 CTGGGTGTGCAGGAGAGAGCTCCGCCCGGGACCCTGCACACACCATCTCC 2086

                   3101          .         .         .         .         . 3150
hh03711            3101 ATCTCCGGCAAGACGGATGCGGTGACGGTGCTCCTGGCCAGAACCACGGC 3150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2087 ATCTCCGGCAAGACGGATGCGGTGACGGTGCTCCTGGCCAGAACCACGGC 2136

                   3151          .         .         .         .         . 3200
hh03711            3151 ACAGCTGCAGGCGGTGGAGAGGGAACTGGCCGAGGAGCGGGCCAAGCTGG 3200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2137 ACAGCTGCAGGCGGTGGAGAGGGAACTGGCCGAGGAGCGGGCCAAGCTGG 2186

                   3201          .         .         .         .         . 3250
hh03711            3201 AGTACACGGAGGAGGAGGTCCTGGAGATGGAGCGCAAGGAGGAGCAGGCC 3250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2187 AGTACACGGAGGAGGAGGTCCTGGAGATGGAGCGCAAGGAGGAGCAGGCC 2236

                   3251          .         .         .         .         . 3300
hh03711            3251 GAGGCCATATCCGAGCGGTAAGGGCTAGCTCAGCGGGCAGGCTCCGGCTC 3300
                        |||||||||||||||||                                 
hh03711(revised)   2237 GAGGCCATATCCGAGCG--------------------------------- 2253

                   3301          .         .         .         .         . 3350
hh03711            3301 ATGCCCTCCCTGGAAAGGAGCATGGGTGCCCTGTGGTCAGAAGGCTCGTG 3350
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3351          .         .         .         .         . 3400
hh03711            3351 AAAACTGTCAGGGGGGAGCACATTTTCTCTGGGGAGACAGCCAGTGTGCC 3400
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3401          .         .         .         .         . 3450
hh03711            3401 AGGCAGCATGGCTGTCTCTGAGGTGCACTTGCTTTCCTCAGCCATGCCTC 3450
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3451          .         .         .         .         . 3500
hh03711            3451 CATAGAAGGTGCTGGGCAATCCTTAGGCACCACTGCCCAGAAGTCGATTC 3500
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3501          .         .         .         .         . 3550
hh03711            3501 TGGTGGAAATTGAGTGCTGGTGTGGACGAGGGCAGCTCCCCGAAGTCTCT 3550
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3551          .         .         .         .         . 3600
hh03711            3551 CTCCTGACTCTCACGTGTGCTTTTCACCTTTTCCTTCTGTCTGTCCTGGA 3600
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3601          .         .         .         .         . 3650
hh03711            3601 GTTTCTTGTCGAGAGTGGGACTGTTGAAGCACTGCCCTCTCCCAGGATTG 3650
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3651          .         .         .         .         . 3700
hh03711            3651 GATACAGTAAGGTCCCTTGAAGTTGTTGGATTTTTTTCTTTTTTAACACC 3700
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3701          .         .         .         .         . 3750
hh03711            3701 TGTATTGAGATATAATGTACCTCCCATGCAGTTCACCCGTTTAAAGTGCA 3750
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3751          .         .         .         .         . 3800
hh03711            3751 CAGTTAGGTGGTTTTTAGGACTGAATGGGCACAGTCAATTTTACAGCATT 3800
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3801          .         .         .         .         . 3850
hh03711            3801 TTATTTTCATCACACACTCTCTGCCTGTCCCTAGCCAAATGCGCTCCCAG 3850
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3851          .         .         .         .         . 3900
hh03711            3851 GTTCTCCTCTGATTCCCTGCAACTACAAATCTGCCCTCTGTGTCTATGGA 3900
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3901          .         .         .         .         . 3950
hh03711            3901 CTTGCCGGTCTGGACACTTCCTACAAATGGGGTCATGCGGCGTCCCTTTC 3950
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   3951          .         .         .         .         . 4000
hh03711            3951 TGCTTCACGTGAAGCAGCCTATTGGTGAATCCTTGGCCCCGTGGAGACCT 4000
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4001          .         .         .         .         . 4050
hh03711            4001 GCATGCGATAGATGAATGATTCCGGTGAATGGGTGCCCCTGGTGCCCTGG 4050
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4051          .         .         .         .         . 4100
hh03711            4051 TTTGCGTTCATCGTCTCTGGAGGTGCTGTACATATTGCTGTACTTCCGCA 4100
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4101          .         .         .         .         . 4150
hh03711            4101 TTTTTCCATAAAGTGCGCCATCTTTCCAGGGCTTCCTGCTGCTTCCCAGT 4150
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4151          .         .         .         .         . 4200
hh03711            4151 GGCTTTCCCTGAGTTTAGTTTACAGAGGAATTTATTTTGGGGAGCGATAG 4200
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4201          .         .         .         .         . 4250
hh03711            4201 TGCATGCAGAGGGGAAGGTGTTGTGTTCAGGGATGGACAGGAGTTGGGAG 4250
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4251          .         .         .         .         . 4300
hh03711            4251 GGGTTTGGGGCTGAGTGGTGCAGTTTTCTGGGATCTTCAGTGGCTGCCAT 4300
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4301          .         .         .         .         . 4350
hh03711            4301 TGGTGACAGAGAAAGCCCCTCTTAAGTACAGTCCTTCAAGAGCCATCTTC 4350
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4351          .         .         .         .         . 4400
hh03711            4351 CCTGGAAAACAGAAGCGCCCTTTTACTTTATGAGAGATGCAACAGTCTTC 4400
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4401          .         .         .         .         . 4450
hh03711            4401 AATCATTGGAAAGAAATAGGTTGTATTGCATTACCTCTACTACTGTGCTC 4450
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4451          .         .         .         .         . 4500
hh03711            4451 TAAGAGTAGCATGAAATACATCCCGTTTGGTGACCATTTGGGCTTCTGCA 4500
                                                                          
hh03711(revised)   2254 -------------------------------------------------- 2254

                   4501          .         .         .         .         . 4550
hh03711            4501 ATGTCCGCCTTCAGGAGTTGGCAAGCGGACTCGGTGGATAGCGGCTGTAG 4550
                                      ||||||||||||||||||||||||||||||||||||
hh03711(revised)   2254 --------------GAGTTGGCAAGCGGACTCGGTGGATAGCGGCTGTAG 2289

                   4551          .         .         .         .         . 4600
hh03711            4551 CAACTCCACCCAGACCAGCCCTCCGTACCCAGAGCCCTGTTGCATGGGTA 4600
                        ||||| ||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2290 CAACTGCACCCAGACCAGCCCTCCGTACCCAGAGCCCTGTTGCATGGGTA 2339

                   4601          .         .         .         .         . 4650
hh03711            4601 TCGACTCCATCCTGGGCCACCCATTTGCTGCTCAGGCAGGGCCTTACAGC 4650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2340 TCGACTCCATCCTGGGCCACCCATTTGCTGCTCAGGCAGGGCCTTACAGC 2389

                   4651          .         .         .         .         . 4700
hh03711            4651 CCCGAGAAATTTCAGCCCTCGCCTCTTAAGGTTGATAAGGAAACCAACAC 4700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2390 CCCGAGAAATTTCAGCCCTCGCCTCTTAAGGTTGATAAGGAAACCAACAC 2439

                   4701          .         .         .         .         . 4750
hh03711            4701 GGAAGATCTCTTTCTGGAAGAAGCAGCCAGCCTCGTGAAGGAGCGGCCCA 4750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2440 GGAAGATCTCTTTCTGGAAGAAGCAGCCAGCCTCGTGAAGGAGCGGCCCA 2489

                   4751          .         .         .         .         . 4800
hh03711            4751 GCCGCCGGGCCCGAGGGTCGCCTTTTGTTCGGAGTGGCACGATTGTCCGT 4800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2490 GCCGCCGGGCCCGAGGGTCGCCTTTTGTTCGGAGTGGCACGATTGTCCGT 2539

                   4801          .         .         .         .         . 4850
hh03711            4801 TCCCAGACATTCTCGCCTGGAGCACGAAGCCAGTATGTTTGCAGACTTTA 4850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2540 TCCCAGACATTCTCGCCTGGAGCACGAAGCCAGTATGTTTGCAGACTTTA 2589

                   4851          .         .         .         .         . 4900
hh03711            4851 TCGTAGTGACAGCGACAGTTCAACGCTGCCCCGGAAGTCCCCCTTTGTCC 4900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2590 TCGTAGTGACAGCGACAGTTCAACGCTGCCCCGGAAGTCCCCCTTTGTCC 2639

                   4901          .         .         .         .         . 4950
hh03711            4901 GAAATACTTTGGAAAGACGAACCCTTCGCTATAAGCAGTCATGCAGGTCT 4950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2640 GAAATACTTTGGAAAGACGAACCCTTCGCTATAAGCAGTCATGCAGGTCT 2689

                   4951          .         .         .         .         . 5000
hh03711            4951 TCCCTGGCTGAGCTCATGGCCCGCACCTCCCTGGACTTGGAGCTGGATCT 5000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2690 TCCCTGGCTGAGCTCATGGCCCGCACCTCCCTGGACTTGGAGCTGGATCT 2739

                   5001          .         .         .         .         . 5050
hh03711            5001 CCAGGCGTCGAGAACACGGCAGAGGCAGCTGAATGAGGAGCTCTGCGCCC 5050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2740 CCAGGCGTCGAGAACACGGCAGAGGCAGCTGAATGAGGAGCTCTGCGCCC 2789

                   5051          .         .         .         .         . 5100
hh03711            5051 TCCGTGAGCTGCGGCAGCGGTTGGAGGACGCCCAGCTCCGTGGCCAGACT 5100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2790 TCCGTGAGCTGCGGCAGCGGTTGGAGGACGCCCAGCTCCGTGGCCAGACT 2839

                   5101          .         .         .         .         . 5150
hh03711            5101 GACCTCCCACCCTGGGTGCTTCGGGACGAGCGGCTCCGTGGCCTGCTGCG 5150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2840 GACCTCCCACCCTGGGTGCTTCGGGACGAGCGGCTCCGTGGCCTGCTGCG 2889

                   5151          .         .         .         .         . 5200
hh03711            5151 GGAGGCCGAGCGGCAGACAAGACAGACCAAACTTGACTACCGTCATGAGC 5200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2890 GGAGGCCGAGCGGCAGACAAGACAGACCAAACTTGACTACCGTCATGAGC 2939

                   5201          .         .         .         .         . 5250
hh03711            5201 AGGCGGCTGAGAAGATGCTGAAGAAGGCCTCCAAGGAGATCTACCAGCTG 5250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2940 AGGCGGCTGAGAAGATGCTGAAGAAGGCCTCCAAGGAGATCTACCAGCTG 2989

                   5251          .         .         .         .         . 5300
hh03711            5251 CGTGGGCAGAGCCACAAAGAGCCCATCCAAGTGCAGACCTTTAGGGAGAA 5300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   2990 CGTGGGCAGAGCCACAAAGAGCCCATCCAAGTGCAGACCTTTAGGGAGAA 3039

                   5301          .         .         .         .         . 5350
hh03711            5301 GATAGCATTCTTCACAAGGCCAAGGATCAACATACCTCCTCTCCCAGCCG 5350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   3040 GATAGCATTCTTCACAAGGCCAAGGATCAACATACCTCCTCTCCCAGCCG 3089

                   5351          .         .         .         .         . 5400
hh03711            5351 ACGACGTCTGATGGAGTGCATTGTGCACATGAAGTATTTATCCACCTGTT 5400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   3090 ACGACGTCTGATGGAGTGCATTGTGCACATGAAGTATTTATCCACCTGTT 3139

                   5401          .         .         .         .         . 5450
hh03711            5401 TTATTTTCATGAAGTTCTTAGACTAGCTGAATTTGTCTTTAAAATATTTG 5450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh03711(revised)   3140 TTATTTTCATGAAGTTCTTAGACTAGCTGAATTTGTCTTTAAAATATTTG 3189

                   5451          .         .         5478
hh03711            5451 TGCAAAGCTATTAATATACACATTTTGT 5478
                        ||||||||||||||||||||||||||||
hh03711(revised)   3190 TGCAAAGCTATTAATATACACATTTTGT 3217