Comparison between the cloned and the revised DNA sequences

Cloned DNA sequence, length = 4203 bp
Revised DNA sequence, length = 4015 bp

<< Positions of primers used in RT-PCR experiment(s) >>

 1 : f NN04507   468 -   488     GAA CAT CAG CTT GGA ATC ACA
     r NN04508   952 -   932     TTA TCG AAG CAA CCA GCC TCC
<< Positions of inserion/deletion/mutation(s) in the aligned sequence >>
 1 :   504 -   691      188-bp deletion  (in the revised sequence)
Predicted coding region: colored in green ( 175 - 3393 in the revised sequence).


*- Clone Name -*      1          .         .         .         .         . 50
hk04165               1 GTCCGTCAGGCCGTGTGTCCCAGGCCGTCGACCCCGCTGTCGCGCTGCGT 50
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)      1 GTCCGTCAGGCCGTGTGTCCCAGGCCGTCGACCCCGCTGTCGCGCTGCGT 50

                     51          .         .         .         .         . 100
hk04165              51 CTGCTCCTTGCATGCCTTTAGATGGTACAGCCTTCAGCCGGGGCTTCGGG 100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)     51 CTGCTCCTTGCATGCCTTTAGATGGTACAGCCTTCAGCCGGGGCTTCGGG 100

                    101          .         .         .         .         . 150
hk04165             101 AGACAGTGCAGCCACCGAGCATCTCTGCTGAGCTTCTCCGCCGATCCTCC 150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    101 AGACAGTGCAGCCACCGAGCATCTCTGCTGAGCTTCTCCGCCGATCCTCC 150

                    151          .         .         .         .         . 200
hk04165             151 TTTTCTAGCAGGCAGCTCTTCTAGGCCACGTCCAGGTCGAGGGGGAAAAT 200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    151 TTTTCTAGCAGGCAGCTCTTCTAGGCCACGTCCAGGTCGAGGGGGAAAAT 200

                    201          .         .         .         .         . 250
hk04165             201 GGCGCCGGCGCCCCTAGGCGTCCCGGAGGAGCAGTTGCTGGGGTGTCGAT 250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    201 GGCGCCGGCGCCCCTAGGCGTCCCGGAGGAGCAGTTGCTGGGGTGTCGAT 250

                    251          .         .         .         .         . 300
hk04165             251 CTAGAGTGCTTTCTCGGTTACTCTTCATTGCCCAGACCGCTCTCCTCCTG 300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    251 CTAGAGTGCTTTCTCGGTTACTCTTCATTGCCCAGACCGCTCTCCTCCTG 300

                    301          .         .         .         .         . 350
hk04165             301 TTGCCCGCCGCCGGAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCAT 350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    301 TTGCCCGCCGCCGGAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCAT 350

                    351          .         .         .         .         . 400
hk04165             351 TCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGG 400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    351 TCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGG 400

                    401          .         .         .         .         . 450
hk04165             401 CGCTGTCGGGCTTGCTGCCCCCCGACACCGCTATCCTGGATTTCAGTCAT 450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    401 CGCTGTCGGGCTTGCTGCCCCCCGACACCGCTATCCTGGATTTCAGTCAT 450

                    451          .         .         .         .         . 500
hk04165             451 AATCGGTTGTCTAACTGGAACATCAGCTTGGAATCACAAACATTACAGGA 500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    451 AATCGGTTGTCTAACTGGAACATCAGCTTGGAATCACAAACATTACAGGA 500

                    501          .         .         .         .         . 550
hk04165             501 AGTGGATAACTTCTTCATGCTCATTGTCTCTGCATTCTCTCCTCCTGGCC 550
                        |||                                               
hk04165(revised)    501 AGT----------------------------------------------- 503

                    551          .         .         .         .         . 600
hk04165             551 CCAGATTCACTGCTTCTAATACGTTGTGGATGAGTACACAGTTGACAAGT 600
                                                                          
hk04165(revised)    504 -------------------------------------------------- 504

                    601          .         .         .         .         . 650
hk04165             601 TTGTTAGCTGAAAGAGTAGGCACTGAGGAAAGGCCTGAAAATGCTTCAGT 650
                                                                          
hk04165(revised)    504 -------------------------------------------------- 504

                    651          .         .         .         .         . 700
hk04165             651 GGGAAGTGCATGAGCTTTATTGCATGGACTTTGTAACTTTGGAAAATGAA 700
                                                                 |||||||||
hk04165(revised)    504 -----------------------------------------GAAAATGAA 512

                    701          .         .         .         .         . 750
hk04165             701 TTACAATGAACTAACAGAAATCCCGTATTTTGGAGAACCTACATCTAATA 750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    513 TTACAATGAACTAACAGAAATCCCGTATTTTGGAGAACCTACATCTAATA 562

                    751          .         .         .         .         . 800
hk04165             751 TTACTCTACTTTCATTAGTCCATAATATAATCCCAGAAATAAATGCACAG 800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    563 TTACTCTACTTTCATTAGTCCATAATATAATCCCAGAAATAAATGCACAG 612

                    801          .         .         .         .         . 850
hk04165             801 GCACTCCAGTTTTACCCTGCTCTGGAGAGTTTAGACCTCAGCTCAAATAT 850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    613 GCACTCCAGTTTTACCCTGCTCTGGAGAGTTTAGACCTCAGCTCAAATAT 662

                    851          .         .         .         .         . 900
hk04165             851 AATATCAGAAATCAAGACATCTTCATTTCCTCGCATGCAGCTTAAATACC 900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    663 AATATCAGAAATCAAGACATCTTCATTTCCTCGCATGCAGCTTAAATACC 712

                    901          .         .         .         .         . 950
hk04165             901 TGAATTTAAGTAATAACAGAATAACCACCTTGGAGGCTGGTTGCTTCGAT 950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    713 TGAATTTAAGTAATAACAGAATAACCACCTTGGAGGCTGGTTGCTTCGAT 762

                    951          .         .         .         .         . 1000
hk04165             951 AATTTATCAAGTTCCTTATTAGTGGTAAAGTTAAACCGTAACCGAATGAG 1000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    763 AATTTATCAAGTTCCTTATTAGTGGTAAAGTTAAACCGTAACCGAATGAG 812

                   1001          .         .         .         .         . 1050
hk04165            1001 CATGATTCCACCTAAGATCTTCAAGCTGCCTCACCTCCAATTCTTGGAAC 1050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    813 CATGATTCCACCTAAGATCTTCAAGCTGCCTCACCTCCAATTCTTGGAAC 862

                   1051          .         .         .         .         . 1100
hk04165            1051 TTAAAAGAAACAGAATTAAAATTGTGGAAGGTCTTACATTCCAAGGGCTT 1100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    863 TTAAAAGAAACAGAATTAAAATTGTGGAAGGTCTTACATTCCAAGGGCTT 912

                   1101          .         .         .         .         . 1150
hk04165            1101 GACTCCTTAAGATCTTTGAAAATGCAGCGGAATGGAATTAGCAAACTTAA 1150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    913 GACTCCTTAAGATCTTTGAAAATGCAGCGGAATGGAATTAGCAAACTTAA 962

                   1151          .         .         .         .         . 1200
hk04165            1151 GGATGGAGCATTTTTTGGCTTGAATAACATGGAAGAACTAGAACTGGAAC 1200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)    963 GGATGGAGCATTTTTTGGCTTGAATAACATGGAAGAACTAGAACTGGAAC 1012

                   1201          .         .         .         .         . 1250
hk04165            1201 ACAACAACCTTACACGAGTAAACAAGGGGTGGTTGTATGGCTTGCGAATG 1250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1013 ACAACAACCTTACACGAGTAAACAAGGGGTGGTTGTATGGCTTGCGAATG 1062

                   1251          .         .         .         .         . 1300
hk04165            1251 TTACAGCAGCTCTATGTGAGCCAGAATGCTATTGAAAGAATCAGCCCTGA 1300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1063 TTACAGCAGCTCTATGTGAGCCAGAATGCTATTGAAAGAATCAGCCCTGA 1112

                   1301          .         .         .         .         . 1350
hk04165            1301 TGCATGGGAGTTCTGCCAAAGACTATCCGAACTTGATTTGTCCTATAACC 1350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1113 TGCATGGGAGTTCTGCCAAAGACTATCCGAACTTGATTTGTCCTATAACC 1162

                   1351          .         .         .         .         . 1400
hk04165            1351 AGCTGACCCGCCTGGATGAATCTGCCTTTGTGGGTCTGAGCTTATTGGAG 1400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1163 AGCTGACCCGCCTGGATGAATCTGCCTTTGTGGGTCTGAGCTTATTGGAG 1212

                   1401          .         .         .         .         . 1450
hk04165            1401 AGATTGAATTTAGGAGACAACAGAGTCACTCATATTGCTGATGGTGTATT 1450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1213 AGATTGAATTTAGGAGACAACAGAGTCACTCATATTGCTGATGGTGTATT 1262

                   1451          .         .         .         .         . 1500
hk04165            1451 TAGATTTCTTTCCAATCTTCAGACATTAGACTTAAGAAACAATGAAATTT 1500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1263 TAGATTTCTTTCCAATCTTCAGACATTAGACTTAAGAAACAATGAAATTT 1312

                   1501          .         .         .         .         . 1550
hk04165            1501 CATGGGCCATAGAAGATGCTAGTGAAGCCTTTGCTGGACTCACAAGTCTC 1550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1313 CATGGGCCATAGAAGATGCTAGTGAAGCCTTTGCTGGACTCACAAGTCTC 1362

                   1551          .         .         .         .         . 1600
hk04165            1551 ACTAAACTAATCTTACAAGGAAACCAGATTAAGTCAATTACAAAGAAAGC 1600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1363 ACTAAACTAATCTTACAAGGAAACCAGATTAAGTCAATTACAAAGAAAGC 1412

                   1601          .         .         .         .         . 1650
hk04165            1601 ATTCATTGGTCTTGAATCCCTTGAGCATCTAGATTTGAACAATAATGCTA 1650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1413 ATTCATTGGTCTTGAATCCCTTGAGCATCTAGATTTGAACAATAATGCTA 1462

                   1651          .         .         .         .         . 1700
hk04165            1651 TAATGTCTATCCAAGAAAATGCTTTTTCTCAGACTCATTTAAAAGAACTG 1700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1463 TAATGTCTATCCAAGAAAATGCTTTTTCTCAGACTCATTTAAAAGAACTG 1512

                   1701          .         .         .         .         . 1750
hk04165            1701 ATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACT 1750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1513 ATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACT 1562

                   1751          .         .         .         .         . 1800
hk04165            1751 TCAATGGTTGGTTGATAATAACTTTCAACATTCTGTGAATGTAAGCTGTG 1800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1563 TCAATGGTTGGTTGATAATAACTTTCAACATTCTGTGAATGTAAGCTGTG 1612

                   1801          .         .         .         .         . 1850
hk04165            1801 CACACCCTGAATGGCTAGCAGGGCAAAGCATCCTGAATGTGGATCTGAAA 1850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1613 CACACCCTGAATGGCTAGCAGGGCAAAGCATCCTGAATGTGGATCTGAAA 1662

                   1851          .         .         .         .         . 1900
hk04165            1851 GATTTTGTCTGTGATGATTTTCTCAAGCCACAGATAAGGACACATCCTGA 1900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1663 GATTTTGTCTGTGATGATTTTCTCAAGCCACAGATAAGGACACATCCTGA 1712

                   1901          .         .         .         .         . 1950
hk04165            1901 AACCATAATTGCTCTAAGAGGCATGAATGTGACTCTGACGTGCACTGCAG 1950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1713 AACCATAATTGCTCTAAGAGGCATGAATGTGACTCTGACGTGCACTGCAG 1762

                   1951          .         .         .         .         . 2000
hk04165            1951 TGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAGACAGTGAA 2000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1763 TGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAGACAGTGAA 1812

                   2001          .         .         .         .         . 2050
hk04165            2001 ATCCTGTATGACGTGGATACTGAGAATTTTGTTCGTTATTGGCAGCAAGC 2050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1813 ATCCTGTATGACGTGGATACTGAGAATTTTGTTCGTTATTGGCAGCAAGC 1862

                   2051          .         .         .         .         . 2100
hk04165            2051 TGGAGAAGCTCTGGAATATACTAGTATCTTACATCTTTTCAATGTGAATT 2100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1863 TGGAGAAGCTCTGGAATATACTAGTATCTTACATCTTTTCAATGTGAATT 1912

                   2101          .         .         .         .         . 2150
hk04165            2101 TCACAGATGAAGGAAAATATCAGTGTATTGTTACTAATCACTTTGGTTCT 2150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1913 TCACAGATGAAGGAAAATATCAGTGTATTGTTACTAATCACTTTGGTTCT 1962

                   2151          .         .         .         .         . 2200
hk04165            2151 AATTATTCTCAGAAAGCCAAACTGACTGTAAATGAGATGCCATCTTTTCT 2200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   1963 AATTATTCTCAGAAAGCCAAACTGACTGTAAATGAGATGCCATCTTTTCT 2012

                   2201          .         .         .         .         . 2250
hk04165            2201 GAAAACGCCAATGGATCTGACTATTCGCACTGGTGCCATGGCCAGATTAG 2250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2013 GAAAACGCCAATGGATCTGACTATTCGCACTGGTGCCATGGCCAGATTAG 2062

                   2251          .         .         .         .         . 2300
hk04165            2251 AATGTGCTGCAGAGGGACACCCTGCACCTCAGATTTCCTGGCAGAAAGAT 2300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2063 AATGTGCTGCAGAGGGACACCCTGCACCTCAGATTTCCTGGCAGAAAGAT 2112

                   2301          .         .         .         .         . 2350
hk04165            2301 GGTGGTACTGACTTTCCTGCGGCTCGAGAAAGACGCATGCACGTCATGCC 2350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2113 GGTGGTACTGACTTTCCTGCGGCTCGAGAAAGACGCATGCACGTCATGCC 2162

                   2351          .         .         .         .         . 2400
hk04165            2351 CGAGGATGACGTCTTCTTTATTGCCAATGTGAAAATAGAAGATATGGGAA 2400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2163 CGAGGATGACGTCTTCTTTATTGCCAATGTGAAAATAGAAGATATGGGAA 2212

                   2401          .         .         .         .         . 2450
hk04165            2401 TCTATAGCTGCATGGCACAAAATACAGCAGGAGGTCTCTCAGCAAATGCT 2450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2213 TCTATAGCTGCATGGCACAAAATACAGCAGGAGGTCTCTCAGCAAATGCT 2262

                   2451          .         .         .         .         . 2500
hk04165            2451 TCCCTAACAGTGTTAGAGACACCCTCATTTATTAGACCCCTGGAGGATAA 2500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2263 TCCCTAACAGTGTTAGAGACACCCTCATTTATTAGACCCCTGGAGGATAA 2312

                   2501          .         .         .         .         . 2550
hk04165            2501 GACAGTAACCCGAGGTGAAACTGCGGTGTTACAGTGCATAGCTGGAGGGA 2550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2313 GACAGTAACCCGAGGTGAAACTGCGGTGTTACAGTGCATAGCTGGAGGGA 2362

                   2551          .         .         .         .         . 2600
hk04165            2551 GTCCTGCCCCTCGTCTCAACTGGACTAAAGATGATGGGCCTTTGCTGGTG 2600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2363 GTCCTGCCCCTCGTCTCAACTGGACTAAAGATGATGGGCCTTTGCTGGTG 2412

                   2601          .         .         .         .         . 2650
hk04165            2601 ACAGAACGACATTTCTTTGCTGCAGCCAATCAGCTTCTCATCATTGTAGA 2650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2413 ACAGAACGACATTTCTTTGCTGCAGCCAATCAGCTTCTCATCATTGTAGA 2462

                   2651          .         .         .         .         . 2700
hk04165            2651 TGCCGGGCTAGAAGATGCTGGGAAATATACCTGCATTATGTCTAACACCC 2700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2463 TGCCGGGCTAGAAGATGCTGGGAAATATACCTGCATTATGTCTAACACCC 2512

                   2701          .         .         .         .         . 2750
hk04165            2701 TTGGGACAGAACGTGGCCACATTTACCTAAATGTCATTTCATCCCCCAAT 2750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2513 TTGGGACAGAACGTGGCCACATTTACCTAAATGTCATTTCATCCCCCAAT 2562

                   2751          .         .         .         .         . 2800
hk04165            2751 TGTGACTCTTCCCAGAGTAGCATTGGGCATGAAGATGATGGCTGGACCAC 2800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2563 TGTGACTCTTCCCAGAGTAGCATTGGGCATGAAGATGATGGCTGGACCAC 2612

                   2801          .         .         .         .         . 2850
hk04165            2801 AGTTGGCATTGTCATCATTGTTGTGGTCTGCTGTGTTGTTGGCACTTCTT 2850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2613 AGTTGGCATTGTCATCATTGTTGTGGTCTGCTGTGTTGTTGGCACTTCTT 2662

                   2851          .         .         .         .         . 2900
hk04165            2851 TGATCTGGGTCATTGTTATTTACCACATGAGAAGGAAAAATGAAGACTAT 2900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2663 TGATCTGGGTCATTGTTATTTACCACATGAGAAGGAAAAATGAAGACTAT 2712

                   2901          .         .         .         .         . 2950
hk04165            2901 AGTATCACAAACACAGAGGAGCTCAATCTGCCTGCAGACATTCCCAGCTA 2950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2713 AGTATCACAAACACAGAGGAGCTCAATCTGCCTGCAGACATTCCCAGCTA 2762

                   2951          .         .         .         .         . 3000
hk04165            2951 CTTGTCTTCCCAAGGAACGCTGTCTGAGCCACAGGAAGGCTACAGCAACT 3000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2763 CTTGTCTTCCCAAGGAACGCTGTCTGAGCCACAGGAAGGCTACAGCAACT 2812

                   3001          .         .         .         .         . 3050
hk04165            3001 CTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGATATATA 3050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2813 CTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGATATATA 2862

                   3051          .         .         .         .         . 3100
hk04165            3051 CACAAAGGCACTGACGGTGGCACTGGTACCCGGGTGATTTGCTCAGATTG 3100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2863 CACAAAGGCACTGACGGTGGCACTGGTACCCGGGTGATTTGCTCAGATTG 2912

                   3101          .         .         .         .         . 3150
hk04165            3101 TTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACA 3150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2913 TTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACA 2962

                   3151          .         .         .         .         . 3200
hk04165            3151 CCTATATTGCTGAGGAGGACGTTCTTGATCAGACACTGTCCAGCCTCATG 3200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   2963 CCTATATTGCTGAGGAGGACGTTCTTGATCAGACACTGTCCAGCCTCATG 3012

                   3201          .         .         .         .         . 3250
hk04165            3201 GTCCAAATGCCTAAAGAGACATATTTAGTACATCCTCCCCAGGATACTAC 3250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3013 GTCCAAATGCCTAAAGAGACATATTTAGTACATCCTCCCCAGGATACTAC 3062

                   3251          .         .         .         .         . 3300
hk04165            3251 TGCCCTAGAGAGCCTGATACCGTCAGCCAACAGAGAGCCATCTGCCTTTC 3300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3063 TGCCCTAGAGAGCCTGATACCGTCAGCCAACAGAGAGCCATCTGCCTTTC 3112

                   3301          .         .         .         .         . 3350
hk04165            3301 CCACCAACCATGAGAGGATAAGTGAGAAGAAACTTCCCTCCACACAGATG 3350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3113 CCACCAACCATGAGAGGATAAGTGAGAAGAAACTTCCCTCCACACAGATG 3162

                   3351          .         .         .         .         . 3400
hk04165            3351 AGCGGTGAAACATTGCAGCGGCCCGTGTGGAACATAAACAGAGAACTAGG 3400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3163 AGCGGTGAAACATTGCAGCGGCCCGTGTGGAACATAAACAGAGAACTAGG 3212

                   3401          .         .         .         .         . 3450
hk04165            3401 CCTGCCTCATCCTCCTTTTTCCCAGCAGCCAGTCCATGAGTCACCACAAC 3450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3213 CCTGCCTCATCCTCCTTTTTCCCAGCAGCCAGTCCATGAGTCACCACAAC 3262

                   3451          .         .         .         .         . 3500
hk04165            3451 TTCATCAAAATGAGGGCCTGGCAGGGAGAGAGCCAGACTGTTCTGCTTCT 3500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3263 TTCATCAAAATGAGGGCCTGGCAGGGAGAGAGCCAGACTGTTCTGCTTCT 3312

                   3501          .         .         .         .         . 3550
hk04165            3501 TCCATGTCCTGCCACAGGTTACAGGATCATGCTTTTGATTTTAGTAGGAC 3550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3313 TCCATGTCCTGCCACAGGTTACAGGATCATGCTTTTGATTTTAGTAGGAC 3362

                   3551          .         .         .         .         . 3600
hk04165            3551 TCGGAACATTCAAGATGGTAGTGAGGGCACATGAAACTCACTTCAGGATG 3600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3363 TCGGAACATTCAAGATGGTAGTGAGGGCACATGAAACTCACTTCAGGATG 3412

                   3601          .         .         .         .         . 3650
hk04165            3601 AAATCTGGGCAGAGACTTATTAATTAATTTTGCATTTACTACCTCAGAGC 3650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3413 AAATCTGGGCAGAGACTTATTAATTAATTTTGCATTTACTACCTCAGAGC 3462

                   3651          .         .         .         .         . 3700
hk04165            3651 TCAGAAGAAACTCCGAAGTCAGCATTTGCTTTACTCTTTCTTTATGATTG 3700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3463 TCAGAAGAAACTCCGAAGTCAGCATTTGCTTTACTCTTTCTTTATGATTG 3512

                   3701          .         .         .         .         . 3750
hk04165            3701 CATCTGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGAT 3750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3513 CATCTGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGAT 3562

                   3751          .         .         .         .         . 3800
hk04165            3751 GAAGAAATGGCAACAGCTGACAGAAATGGGTACAGCTCATCAAAAATGTG 3800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3563 GAAGAAATGGCAACAGCTGACAGAAATGGGTACAGCTCATCAAAAATGTG 3612

                   3801          .         .         .         .         . 3850
hk04165            3801 CAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCTTCC 3850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3613 CAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCTTCC 3662

                   3851          .         .         .         .         . 3900
hk04165            3851 ATGGGGATGTGCTCTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTGC 3900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3663 ATGGGGATGTGCTCTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTGC 3712

                   3901          .         .         .         .         . 3950
hk04165            3901 TGCTTAACATGCTGGATTGCCCTAGTCTTCAGAATGGTCCTGAGAAAACA 3950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3713 TGCTTAACATGCTGGATTGCCCTAGTCTTCAGAATGGTCCTGAGAAAACA 3762

                   3951          .         .         .         .         . 4000
hk04165            3951 TCACTACTTCGATGTTCTACTTTGCTTTCCAAGGAGCAAAAATAACTTTG 4000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3763 TCACTACTTCGATGTTCTACTTTGCTTTCCAAGGAGCAAAAATAACTTTG 3812

                   4001          .         .         .         .         . 4050
hk04165            4001 GAGCCTTCTGGGAAGTGTGCCTGGGATTCTTCAGTGGTTTCAGGCAGATA 4050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3813 GAGCCTTCTGGGAAGTGTGCCTGGGATTCTTCAGTGGTTTCAGGCAGATA 3862

                   4051          .         .         .         .         . 4100
hk04165            4051 GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCT 4100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3863 GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCT 3912

                   4101          .         .         .         .         . 4150
hk04165            4101 TGACCAACTGGTACCAGGTCAAAGATTTTTGTATTCTTGTGAATTTTTTT 4150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3913 TGACCAACTGGTACCAGGTCAAAGATTTTTGTATTCTTGTGAATTTTTTT 3962

                   4151          .         .         .         .         . 4200
hk04165            4151 TTTTGTCCCTATTGCCCAGGGATGTCATTGTAAATATATGTGCATTTATA 4200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hk04165(revised)   3963 TTTTGTCCCTATTGCCCAGGGATGTCATTGTAAATATATGTGCATTTATA 4012

                   4201     4203
hk04165            4201 AAT 4203
                        |||
hk04165(revised)   4013 AAT 4015