hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14404004/chunk_1/iprscan-20080501-14404004.nocrc
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Query sequence: KIAA0005
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02020.8.fs eIF4-gamma/eIF5/eIF2-epsilon                   125.6    1.5e-37   1
PF02020.8.ls eIF4-gamma/eIF5/eIF2-epsilon                   127.5    3.4e-35   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02020.8.fs   1/1     340   420 ..     1    87 []   125.6  1.5e-37
PF02020.8.ls   1/1     340   420 ..     1    87 []   127.5  3.4e-35

Alignments of top-scoring domains:
PF02020.8.fs: domain 1 of 1, from 340 to 420: score 125.6, E = 1.5e-37
                   *->eeeqidlLlalEefcveleeelvikllakilvslYDaDileEeaIlk
                       +++++lLl+++e+c+++ +++ +k+++ki+v++Y+a++l+Ee+Ilk
    KIAA0005   340    GQSELTLLLKIQEYCYDN-IHF-MKAFQKIVVLFYKAEVLSEEPILK 384  

                   WyekadsadeskEgkkkvrkqakkFvtWLkeAeEEEseed<-*
                   Wy++a++a++    k+++++q+kkFv+WLk+AeEE+++e    
    KIAA0005   385 WYKDAHVAKG----KSVFLEQMKKFVEWLKNAEEESESEA    420  

PF02020.8.ls: domain 1 of 1, from 340 to 420: score 127.5, E = 3.4e-35
                   *->eeeqidlLlalEefcveleeelvikllakilvslYDaDileEeaIlk
                       +++++lLl+++e+c+++ +++ +k+++ki+v++Y+a++l+Ee+Ilk
    KIAA0005   340    GQSELTLLLKIQEYCYDN-IHF-MKAFQKIVVLFYKAEVLSEEPILK 384  

                   WyekadsadeskEgkkkvrkqakkFvtWLkeAeEEEseed<-*
                   Wy++a++a++    k+++++q+kkFv+WLk+AeEE+++e    
    KIAA0005   385 WYKDAHVAKG----KSVFLEQMKKFVEWLKNAEEESESEA    420  

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