hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14404004/chunk_1/iprscan-20080501-14404004.nocrc
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Query sequence: KIAA0005
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00515                                                 139.0    4.9e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00515    1/1     330   415 ..     1    92 []   139.0  4.9e-37

Alignments of top-scoring domains:
SM00515: domain 1 of 1, from 330 to 415: score 139.0, E = 4.9e-37
                   *->gpllkfllkdeeeqlelLyaiEefcvelekellkllpkilksLYDeD
                      +pll++++++++++l lL++i+e+c+++ + ++k ++ki++++Y ++
    KIAA0005   330    SPLLAAFTTQGQSELTLLLKIQEYCYDNIH-FMKAFQKIVVLFYKAE 375  

                   vleEeaIlkWyekkSKkyvsaeekskvrknakpqFvtWLqeAEEE<-*
                   vl+Ee IlkWy+++    ++a++ks++++++k+ Fv+WL++AEEE   
    KIAA0005   376 VLSEEPILKWYKDA----HVAKGKSVFLEQMKK-FVEWLKNAEEE    415  

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