# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha00537.fasta.nr -Q ../query/KIAA0019.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0019, 838 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7814927 sequences Expectation_n fit: rho(ln(x))= 6.2077+/-0.000196; mu= 9.3762+/- 0.011 mean_var=116.0393+/-21.731, 0's: 39 Z-trim: 84 B-trim: 0 in 0/66 Lambda= 0.119062 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|50897492|sp|Q92738.3|US6NL_HUMAN RecName: Full= ( 828) 5642 980.6 0 gi|158259349|dbj|BAF85633.1| unnamed protein produ ( 828) 5638 979.9 0 gi|117645556|emb|CAL38244.1| hypothetical protein ( 828) 5636 979.6 0 gi|117646866|emb|CAL37548.1| hypothetical protein ( 828) 5633 979.0 0 gi|122937432|ref|NP_001073960.1| USP6 N-terminal l ( 845) 5631 978.7 0 gi|114629325|ref|XP_001135354.1| PREDICTED: USP6 N ( 828) 5590 971.7 0 gi|114629323|ref|XP_521413.2| PREDICTED: USP6 N-te ( 845) 5579 969.8 0 gi|109088207|ref|XP_001082977.1| PREDICTED: USP6 N ( 961) 5470 951.1 0 gi|149743587|ref|XP_001499567.1| PREDICTED: USP6 N ( 847) 4906 854.2 0 gi|73949154|ref|XP_544260.2| PREDICTED: similar to ( 839) 4601 801.8 0 gi|126340402|ref|XP_001367551.1| PREDICTED: simila ( 861) 4179 729.3 1.6e-207 gi|149021039|gb|EDL78646.1| USP6 N-terminal like ( ( 816) 3369 590.1 1.2e-165 gi|50897488|sp|Q80XC3.2|US6NL_MOUSE RecName: Full= ( 819) 3369 590.1 1.2e-165 gi|74196253|dbj|BAE33027.1| unnamed protein produc ( 819) 3366 589.6 1.7e-165 gi|122890677|emb|CAM13702.1| USP6 N-terminal like ( 842) 3357 588.1 5.1e-165 gi|194672393|ref|XP_608934.4| PREDICTED: similar t ( 831) 3312 580.4 1.1e-162 gi|149437033|ref|XP_001508840.1| PREDICTED: simila ( 842) 3173 556.5 1.7e-155 gi|67969147|dbj|BAE00927.1| unnamed protein produc ( 504) 2666 469.2 1.9e-129 gi|80476553|gb|AAI08646.1| MGC131359 protein [Xeno ( 820) 2566 452.2 4e-124 gi|189518235|ref|XP_690625.3| PREDICTED: similar t ( 849) 2391 422.2 4.6e-115 gi|149021040|gb|EDL78647.1| USP6 N-terminal like ( ( 763) 2213 391.6 6.7e-106 gi|148676036|gb|EDL07983.1| USP6 N-terminal like, ( 766) 2200 389.3 3.2e-105 gi|55251089|emb|CAH68910.1| novel protein [Danio r ( 423) 2063 365.6 2.5e-98 gi|189442657|gb|AAI67441.1| Si:ch211-198d18.2 prot ( 747) 2040 361.8 5.9e-97 gi|47212400|emb|CAF96702.1| unnamed protein produc ( 561) 1948 345.9 2.7e-92 gi|53127308|emb|CAG31037.1| hypothetical protein [ ( 481) 1784 317.7 7.3e-84 gi|163916009|gb|AAI57166.1| LOC100135167 protein [ ( 320) 1769 315.0 3.2e-83 gi|47215245|emb|CAG01137.1| unnamed protein produc ( 691) 1744 311.0 1.1e-81 gi|94732443|emb|CAK04935.1| novel protein similar ( 409) 1729 308.2 4.5e-81 gi|125822232|ref|XP_686696.2| PREDICTED: similar t ( 603) 1729 308.3 6e-81 gi|126344814|ref|XP_001381839.1| PREDICTED: hypoth ( 493) 1725 307.6 8.4e-81 gi|189537557|ref|XP_689159.3| PREDICTED: similar t ( 825) 1713 305.7 5.1e-80 gi|210114797|gb|EEA62554.1| hypothetical protein B ( 359) 1653 295.1 3.5e-77 gi|220678271|emb|CAX13002.1| novel protein similar ( 360) 1644 293.5 1e-76 gi|115926881|ref|XP_001196038.1| PREDICTED: hypoth ( 796) 1634 292.1 6e-76 gi|115943129|ref|XP_781323.2| PREDICTED: hypotheti ( 829) 1631 291.6 8.9e-76 gi|118091352|ref|XP_421043.2| PREDICTED: hypotheti ( 742) 1621 289.9 2.7e-75 gi|210114784|gb|EEA62541.1| hypothetical protein B ( 359) 1567 280.3 9.8e-73 gi|194218611|ref|XP_001489584.2| PREDICTED: simila ( 651) 1562 279.7 2.8e-72 gi|212516894|gb|EEB18848.1| conserved hypothetical ( 616) 1505 269.9 2.3e-69 gi|156229228|gb|EDO50024.1| predicted protein [Nem ( 357) 1451 260.4 9.7e-67 gi|221107621|ref|XP_002162645.1| PREDICTED: simila ( 542) 1428 256.6 2e-65 gi|91094671|ref|XP_972558.1| PREDICTED: similar to ( 591) 1419 255.1 6.4e-65 gi|190586549|gb|EDV26602.1| hypothetical protein T ( 348) 1395 250.8 7.5e-64 gi|108874170|gb|EAT38395.1| conserved hypothetical ( 517) 1353 243.7 1.5e-61 gi|167880934|gb|EDS44317.1| conserved hypothetical ( 482) 1342 241.8 5.2e-61 gi|66565150|ref|XP_624849.1| PREDICTED: similar to ( 571) 1343 242.0 5.3e-61 gi|158600500|gb|EDP37684.1| TBC domain containing ( 915) 1343 242.2 7.5e-61 gi|156547297|ref|XP_001601486.1| PREDICTED: simila ( 594) 1335 240.6 1.4e-60 gi|167866566|gb|EDS29949.1| ecotropic viral integr ( 543) 1327 239.2 3.4e-60 >>gi|50897492|sp|Q92738.3|US6NL_HUMAN RecName: Full=USP6 (828 aa) initn: 5642 init1: 5642 opt: 5642 Z-score: 5240.2 bits: 980.6 E(): 0 Smith-Waterman score: 5642; 100.000% identity (100.000% similar) in 828 aa overlap (11-838:1-828) 10 20 30 40 50 60 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF 10 20 30 40 50 70 80 90 100 110 120 KIAA00 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW 60 70 80 90 100 110 130 140 150 160 170 180 KIAA00 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF 120 130 140 150 160 170 190 200 210 220 230 240 KIAA00 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA00 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 240 250 260 270 280 290 310 320 330 340 350 360 KIAA00 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA00 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA00 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN 420 430 440 450 460 470 490 500 510 520 530 540 KIAA00 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV 480 490 500 510 520 530 550 560 570 580 590 600 KIAA00 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA 540 550 560 570 580 590 610 620 630 640 650 660 KIAA00 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN 600 610 620 630 640 650 670 680 690 700 710 720 KIAA00 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY 660 670 680 690 700 710 730 740 750 760 770 780 KIAA00 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA 720 730 740 750 760 770 790 800 810 820 830 KIAA00 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL 780 790 800 810 820 >>gi|158259349|dbj|BAF85633.1| unnamed protein product [ (828 aa) initn: 5638 init1: 5638 opt: 5638 Z-score: 5236.4 bits: 979.9 E(): 0 Smith-Waterman score: 5638; 99.879% identity (100.000% similar) in 828 aa overlap (11-838:1-828) 10 20 30 40 50 60 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF 10 20 30 40 50 70 80 90 100 110 120 KIAA00 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW 60 70 80 90 100 110 130 140 150 160 170 180 KIAA00 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF 120 130 140 150 160 170 190 200 210 220 230 240 KIAA00 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA00 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 240 250 260 270 280 290 310 320 330 340 350 360 KIAA00 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA00 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA00 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN 420 430 440 450 460 470 490 500 510 520 530 540 KIAA00 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV 480 490 500 510 520 530 550 560 570 580 590 600 KIAA00 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA 540 550 560 570 580 590 610 620 630 640 650 660 KIAA00 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|158 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGDARGLAHPPSYSNPPVYHGNSPKHFPTAN 600 610 620 630 640 650 670 680 690 700 710 720 KIAA00 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY 660 670 680 690 700 710 730 740 750 760 770 780 KIAA00 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA 720 730 740 750 760 770 790 800 810 820 830 KIAA00 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL 780 790 800 810 820 >>gi|117645556|emb|CAL38244.1| hypothetical protein [syn (828 aa) initn: 5636 init1: 5636 opt: 5636 Z-score: 5234.6 bits: 979.6 E(): 0 Smith-Waterman score: 5636; 99.879% identity (100.000% similar) in 828 aa overlap (11-838:1-828) 10 20 30 40 50 60 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF 10 20 30 40 50 70 80 90 100 110 120 KIAA00 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW 60 70 80 90 100 110 130 140 150 160 170 180 KIAA00 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF 120 130 140 150 160 170 190 200 210 220 230 240 KIAA00 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 HVLAAHSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA00 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 240 250 260 270 280 290 310 320 330 340 350 360 KIAA00 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA00 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA00 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN 420 430 440 450 460 470 490 500 510 520 530 540 KIAA00 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV 480 490 500 510 520 530 550 560 570 580 590 600 KIAA00 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA 540 550 560 570 580 590 610 620 630 640 650 660 KIAA00 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN 600 610 620 630 640 650 670 680 690 700 710 720 KIAA00 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY 660 670 680 690 700 710 730 740 750 760 770 780 KIAA00 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA 720 730 740 750 760 770 790 800 810 820 830 KIAA00 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL 780 790 800 810 820 >>gi|117646866|emb|CAL37548.1| hypothetical protein [syn (828 aa) initn: 5633 init1: 5633 opt: 5633 Z-score: 5231.8 bits: 979.0 E(): 0 Smith-Waterman score: 5633; 99.879% identity (99.879% similar) in 828 aa overlap (11-838:1-828) 10 20 30 40 50 60 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF 10 20 30 40 50 70 80 90 100 110 120 KIAA00 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|117 LHEEELPDHNVAVERQKHLEIGRTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW 60 70 80 90 100 110 130 140 150 160 170 180 KIAA00 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF 120 130 140 150 160 170 190 200 210 220 230 240 KIAA00 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA00 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 240 250 260 270 280 290 310 320 330 340 350 360 KIAA00 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA00 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA00 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN 420 430 440 450 460 470 490 500 510 520 530 540 KIAA00 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV 480 490 500 510 520 530 550 560 570 580 590 600 KIAA00 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA 540 550 560 570 580 590 610 620 630 640 650 660 KIAA00 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN 600 610 620 630 640 650 670 680 690 700 710 720 KIAA00 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY 660 670 680 690 700 710 730 740 750 760 770 780 KIAA00 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA 720 730 740 750 760 770 790 800 810 820 830 KIAA00 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL 780 790 800 810 820 >>gi|122937432|ref|NP_001073960.1| USP6 N-terminal like (845 aa) initn: 5630 init1: 5630 opt: 5631 Z-score: 5229.8 bits: 978.7 E(): 0 Smith-Waterman score: 5631; 98.923% identity (99.402% similar) in 836 aa overlap (3-838:10-845) 10 20 30 40 50 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK : . . . .::::::::::::::::::::::::::::::::::::::::: gi|122 MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK 10 20 30 40 50 60 60 70 80 90 100 110 KIAA00 VTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 VTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL 70 80 90 100 110 120 120 130 140 150 160 170 KIAA00 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG 130 140 150 160 170 180 180 190 200 210 220 230 KIAA00 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF 190 200 210 220 230 240 240 250 260 270 280 290 KIAA00 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR 250 260 270 280 290 300 300 310 320 330 340 350 KIAA00 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ 310 320 330 340 350 360 360 370 380 390 400 410 KIAA00 ISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRR 370 380 390 400 410 420 420 430 440 450 460 470 KIAA00 ESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQ 430 440 450 460 470 480 480 490 500 510 520 530 KIAA00 YNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 YNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPA 490 500 510 520 530 540 540 550 560 570 580 590 KIAA00 EVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 EVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYP 550 560 570 580 590 600 600 610 620 630 640 650 KIAA00 PSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 PSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSP 610 620 630 640 650 660 660 670 680 690 700 710 KIAA00 KHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 KHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPV 670 680 690 700 710 720 720 730 740 750 760 770 KIAA00 DTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 DTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPK 730 740 750 760 770 780 780 790 800 810 820 830 KIAA00 YSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 YSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQ 790 800 810 820 830 840 KIAA00 ESVLL ::::: gi|122 ESVLL >>gi|114629325|ref|XP_001135354.1| PREDICTED: USP6 N-ter (828 aa) initn: 5590 init1: 5590 opt: 5590 Z-score: 5191.9 bits: 971.7 E(): 0 Smith-Waterman score: 5590; 99.155% identity (99.758% similar) in 828 aa overlap (11-838:1-828) 10 20 30 40 50 60 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGF 10 20 30 40 50 70 80 90 100 110 120 KIAA00 LHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVW ::::::::::.:::::::::::::::::::::::::::.::::::::::::::::::::: gi|114 LHEEELPDHNAAVERQKHLEIERTTKWLKMLKGWEKYKHTEKFHRRIYKGIPLQLRGEVW 60 70 80 90 100 110 130 140 150 160 170 180 KIAA00 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF 120 130 140 150 160 170 190 200 210 220 230 240 KIAA00 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA00 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 240 250 260 270 280 290 310 320 330 340 350 360 KIAA00 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|114 EGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMAELK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA00 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHR :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|114 RAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRLSPLASGRRESGAPHR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA00 RHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|114 RHEHSPHPQSRTGTPERAQPARRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAAN 420 430 440 450 460 470 490 500 510 520 530 540 KIAA00 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNV :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|114 QNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPTLAVTVPGPAEVRVSNV 480 490 500 510 520 530 550 560 570 580 590 600 KIAA00 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHA 540 550 560 570 580 590 610 620 630 640 650 660 KIAA00 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTAN :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|114 EPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSSPPVYHGNSPKHFPTAN 600 610 620 630 640 650 670 680 690 700 710 720 KIAA00 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGY 660 670 680 690 700 710 730 740 750 760 770 780 KIAA00 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPKYSAFQLA 720 730 740 750 760 770 790 800 810 820 830 KIAA00 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQESVLL 780 790 800 810 820 >>gi|114629323|ref|XP_521413.2| PREDICTED: USP6 N-termin (845 aa) initn: 5578 init1: 5578 opt: 5579 Z-score: 5181.6 bits: 969.8 E(): 0 Smith-Waterman score: 5579; 98.086% identity (99.163% similar) in 836 aa overlap (3-838:10-845) 10 20 30 40 50 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK : . . . .::::::::::::::::::::::::::::::::::::::::: gi|114 MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK 10 20 30 40 50 60 60 70 80 90 100 110 KIAA00 VTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL :::::::::::::::::.:::::::::::::::::::::::::::.:::::::::::::: gi|114 VTDRFGFLHEEELPDHNAAVERQKHLEIERTTKWLKMLKGWEKYKHTEKFHRRIYKGIPL 70 80 90 100 110 120 120 130 140 150 160 170 KIAA00 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG 130 140 150 160 170 180 180 190 200 210 220 230 KIAA00 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF 190 200 210 220 230 240 240 250 260 270 280 290 KIAA00 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR 250 260 270 280 290 300 300 310 320 330 340 350 KIAA00 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ 310 320 330 340 350 360 360 370 380 390 400 410 KIAA00 ISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRR :::.::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 ISMAELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRLSPLASGRR 370 380 390 400 410 420 420 430 440 450 460 470 KIAA00 ESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQ ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|114 ESGAPHRRHEHSPHPQSRTGTPERAQPARRKSVEEESKKLKDEADFQRKLPSGPQDSSRQ 430 440 450 460 470 480 480 490 500 510 520 530 KIAA00 YNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPA ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 YNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPTLAVTVPGPA 490 500 510 520 530 540 540 550 560 570 580 590 KIAA00 EVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYP 550 560 570 580 590 600 600 610 620 630 640 650 KIAA00 PSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSP ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 PSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSSPPVYHGNSP 610 620 630 640 650 660 660 670 680 690 700 710 KIAA00 KHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPV 670 680 690 700 710 720 720 730 740 750 760 770 KIAA00 DTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRGNLPK 730 740 750 760 770 780 780 790 800 810 820 830 KIAA00 YSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDGLSIQ 790 800 810 820 830 840 KIAA00 ESVLL ::::: gi|114 ESVLL >>gi|109088207|ref|XP_001082977.1| PREDICTED: USP6 N-ter (961 aa) initn: 5469 init1: 5469 opt: 5470 Z-score: 5079.6 bits: 951.1 E(): 0 Smith-Waterman score: 5470; 96.053% identity (98.684% similar) in 836 aa overlap (5-838:126-961) 10 20 30 KIAA00 LGQHSDPFPVM--NSDQDVALKLAQERAEIVAKY :. : .. .:::::::::::::::::::: gi|109 SEGSFMPADKLHWCRIHNDAYLRVSCHKAGSSKFDIFFADSDQDVALKLAQERAEIVAKY 100 110 120 130 140 150 40 50 60 70 80 90 KIAA00 DRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLK ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|109 DRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNAAVERQKHLEIERTTKWLKMLK 160 170 180 190 200 210 100 110 120 130 140 150 KIAA00 GWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIR 220 230 240 250 260 270 160 170 180 190 200 210 KIAA00 QIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNE 280 290 300 310 320 330 220 230 240 250 260 270 KIAA00 EDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSF 340 350 360 370 380 390 280 290 300 310 320 330 KIAA00 YTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 YTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEDLVEF 400 410 420 430 440 450 340 350 360 370 380 390 KIAA00 FQETLAKDFFFEDDFVIEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGV ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: :: gi|109 FQETLAKDFFFEDDFVIEQLQISMAELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSGGV 460 470 480 490 500 510 400 410 420 430 440 450 KIAA00 HHLSNGQRSVGRPSPLASGRRESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKK ::::::::::::::: .::::::.::::::::: :::::::::::::::::::::::::: gi|109 HHLSNGQRSVGRPSPQVSGRRESAAPHRRHEHSLHPQSRTGTPERAQPPRRKSVEEESKK 520 530 540 550 560 570 460 470 480 490 500 510 KIAA00 LKDEADFQRKLPSGPQDSSRQYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKY ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LKDEVDFQRKLPSGPQDSSRQYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKY 580 590 600 610 620 630 520 530 540 550 560 570 KIAA00 TMEGKGRAAHPALAVTVPGPAEVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSG :::.:::::::.::::.::::::::.:.:::::::::::::::::::::::::::::::: gi|109 TMESKGRAAHPTLAVTAPGPAEVRVANARPKMKALDAEDGKRGSTASQYDNVPGPELDSG 640 650 660 670 680 690 580 590 600 610 620 630 KIAA00 ASVEEALERAYSQSPRHALYPPSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGE ::::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::: gi|109 ASVEEALERAYSQSPRHALYPPSPRKHAEPSSSPSKVSSKFTFKVQTPSHARYPSQLDGE 700 710 720 730 740 750 640 650 660 670 680 690 KIAA00 ARGLAHPPSYSNPPVYHGNSPKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPE ::::::::::::::.:::::::::::::::::: ::::::::::::::::::::.::::: gi|109 ARGLAHPPSYSNPPIYHGNSPKHFPTANSSFASSQFSPGTQLNPSRRPHGSTLSISASPE 760 770 780 790 800 810 700 710 720 730 740 750 KIAA00 KSYSRPSPLVLPSSRIEVLPVDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYT ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::.:: gi|109 KSYSRPSPLVLPSSRIEVLPVDVGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVTYT 820 830 840 850 860 870 760 770 780 790 800 810 KIAA00 YRPETQGQSWTRDASRGNLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGY :::::::::::::::: ::::::::: ::::::::::::::::::::.:::::::::::: gi|109 YRPETQGQSWTRDASRDNLPKYSAFQHAPFQDHGLPAVSVDSPVRYKTSPAAEDASPSGY 880 890 900 910 920 930 820 830 KIAA00 PYSGPPPPAYHYRNRDGLSIQESVLL :::::::::::::::::::.:::::: gi|109 PYSGPPPPAYHYRNRDGLSMQESVLL 940 950 960 >>gi|149743587|ref|XP_001499567.1| PREDICTED: USP6 N-ter (847 aa) initn: 4228 init1: 2629 opt: 4906 Z-score: 4556.8 bits: 854.2 E(): 0 Smith-Waterman score: 4906; 86.763% identity (95.187% similar) in 831 aa overlap (12-838:19-847) 10 20 30 40 50 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK .::::::::::::::::::::::::::::::::::::::::: gi|149 MRTEAVVNSQGQTGYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK 10 20 30 40 50 60 60 70 80 90 100 110 KIAA00 VTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL :::::::::::::: ::.:.:::::::::::::::::::::::::::::::::::::::: gi|149 VTDRFGFLHEEELPYHNAAMERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL 70 80 90 100 110 120 120 130 140 150 160 170 KIAA00 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG 130 140 150 160 170 180 180 190 200 210 220 230 KIAA00 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF 190 200 210 220 230 240 240 250 260 270 280 290 KIAA00 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR 250 260 270 280 290 300 300 310 320 330 340 350 KIAA00 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQ 310 320 330 340 350 360 360 370 380 390 400 410 KIAA00 ISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRR :::.:::::::::::::::::.::::::::::: :: :. ::::::::::. :: :.:. gi|149 ISMAELKRAKLDLPEPGKEDEFPKKPLGQLPPECQSAGISHLSNGQRSVGKSSPHMSSRQ 370 380 390 400 410 420 420 430 440 450 460 470 KIAA00 ESGA-PHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSR :::. ::...::::: ::: :::::.. ::::..:.:::::.::.:::::::::::.:: gi|149 ESGSSPHKKQEHSPHHQSRIGTPERVRQLRRKSADEDSKKLKEEANFQRKLPSGPQDNSR 430 440 450 460 470 480 480 490 500 510 520 530 KIAA00 QYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGP ::::::::::::::::::::::::::::::.:..:.::::..:::::.:::.:.::.:. gi|149 QYNHAAANQNSNATSNIRKEFVPKWNKPSDTSTSEKTAKYAVEGKGRSAHPTLTVTIPSS 490 500 510 520 530 540 540 550 560 570 580 590 KIAA00 AEVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALY :..:.:::: :::. ::..:::::.::::::: :: ..:.:.:::::::::::::. .: gi|149 ADARMSNVRQKMKVWDADEGKRGSNASQYDNV--PENENGTSIEEALERAYSQSPRNIVY 550 560 570 580 590 600 610 620 630 640 650 KIAA00 PPSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNS ::::::::::::::. :::::::::::.:.:::.:::: : .::::::::::::::: gi|149 SHSPRKHAEPSSSPSKIPNKFTFKVQPPSYAKYPSHLDGEDGGTVHPPSYSNPPVYHGNS 600 610 620 630 640 650 660 670 680 690 700 710 KIAA00 PKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLP :::.:::::::.:::..::::.::::::.:::::...:::::::::.::::::::::::: gi|149 PKHIPTANSSFVSPQLTPGTQMNPSRRPYGSTLSIDSSPEKSYSRPTPLVLPSSRIEVLP 660 670 680 690 700 710 720 730 740 750 760 KIAA00 VDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRG--- :: ::::::::::::::::.:::::::::::: :::::::::: .::::::: .:. gi|149 VDIGAGGYSGNSGSPKNGKFIIPPVDYLPDNRKRSEVSYTYRPEMHGQSWTRDPNRSHLS 720 730 740 750 760 770 770 780 790 800 810 820 KIAA00 NLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDG ::::::::: . :::..::::::::::::..::: :::: ::: :::: :::::::::: gi|149 NLPKYSAFQHVSFQDRNLPAVSVDSPVRYRTSPALEDASSSGYQYSGPSSPAYHYRNRDG 780 790 800 810 820 830 830 KIAA00 LSIQESVLL ::::::::: gi|149 LSIQESVLL 840 >>gi|73949154|ref|XP_544260.2| PREDICTED: similar to USP (839 aa) initn: 3984 init1: 2487 opt: 4601 Z-score: 4273.7 bits: 801.8 E(): 0 Smith-Waterman score: 4721; 84.717% identity (93.020% similar) in 831 aa overlap (12-838:19-839) 10 20 30 40 50 KIAA00 LGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK .::::::::::::::::::::::::::::::::::::::::: gi|739 MRTEAAVNSQGRTNRLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYK 10 20 30 40 50 60 60 70 80 90 100 110 KIAA00 VTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL :::::::::::::: ::.:.::::.::::::::::::::::::::::::::::::::::: gi|739 VTDRFGFLHEEELPYHNAAMERQKQLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPL 70 80 90 100 110 120 120 130 140 150 160 170 KIAA00 QLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|739 QLRGEVWALLLEIPKMKEETRDLYNKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG 130 140 150 160 170 180 180 190 200 210 220 230 KIAA00 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF 190 200 210 220 230 240 240 250 260 270 280 290 KIAA00 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLR 250 260 270 280 290 300 300 310 320 330 340 350 KIAA00 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 IWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQ 310 320 330 340 350 360 360 370 380 390 400 410 KIAA00 ISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPLASGRR :::.::::::::::::::::::::::::::::: : . :::::.::::. :: :.:: gi|739 ISMVELKRAKLDLPEPGKEDEYPKKPLGQLPPEPAS--ISHLSNGRRSVGKSSPHMSSRR 370 380 390 400 410 420 430 440 450 460 470 KIAA00 ESGA-PHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSR :::. ::..:: ::: ::: :::::.. :::: .:.:.:::.::::::::::::::::. gi|739 ESGSSPHKKHEPSPHHQSRIGTPERVRVQRRKSDDEDSRKLKEEADFQRKLPSGPQDSSK 420 430 440 450 460 470 480 490 500 510 520 530 KIAA00 QYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGP :::::::::::::::: :::::::::::::.:: :.::::..:::.:...:.::::.:. gi|739 QYNHAAANQNSNATSNTRKEFVPKWNKPSDISAIEKTAKYAIEGKSRSVQPTLAVTIPSS 480 490 500 510 520 530 540 550 560 570 580 590 KIAA00 AEVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALY :..:.:::: :::.:::..:::::.::::::: :: :..::.:::::::::::::. . gi|739 ADTRISNVRQKMKVLDADEGKRGSNASQYDNV--PENDNSASIEEALERAYSQSPRNMVS 540 550 560 570 580 590 600 610 620 630 640 650 KIAA00 PPSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNS ::::: ::.::::.: .:::::::: .. .::: :::: : .::::::::::::::: gi|739 SHSPRKHMEPGSSPSRVPTKFTFKVQPAGYPKYPSPLDGEDRRTVHPPSYSNPPVYHGNS 600 610 620 630 640 650 660 670 680 690 700 710 KIAA00 PKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLP :::.:.:::: :::::. :.: ::::::.::::::..::::::.:: ::::::::::::: gi|739 PKHIPSANSSCASPQFTHGAQRNPSRRPYGSTLSVDVSPEKSYGRPLPLVLPSSRIEVLP 660 670 680 690 700 710 720 730 740 750 760 KIAA00 VDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASRG--- :: ::::::::: ::::::.:::::::: ::: :::::::.:: ::.::.:: gi|739 VDPGAGGYSGNSESPKNGKFIIPPVDYL------SEVIYTYRPETHGQLWTQDANRGHLS 720 730 740 750 760 770 770 780 790 800 810 820 KIAA00 NLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNRDG ::::::::: . ::::.::::::::::::..::. :::: ::: :::: ::.:::::::: gi|739 NLPKYSAFQHVSFQDHSLPAVSVDSPVRYRTSPGLEDASSSGYQYSGPSPPVYHYRNRDG 780 790 800 810 820 830 830 KIAA00 LSIQESVLL ::::::::: gi|739 LSIQESVLL 838 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 14:56:08 2009 done: Tue Mar 3 14:59:48 2009 Total Scan time: 1670.600 Total Display time: 0.570 Function used was FASTA [version 34.26.5 April 26, 2007]