hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15041821/chunk_1/iprscan-20080501-15041821.nocrc
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Query sequence: KIAA0019
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00566.9.fs TBC domain                                      98.5    4.3e-27   1
PF00566.9.ls TBC domain                                     100.4    4.9e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00566.9.fs   1/1     107   324 ..     1   219 []    98.5  4.3e-27
PF00566.9.ls   1/1     107   324 ..     1   219 []   100.4  4.9e-27

Alignments of top-scoring domains:
PF00566.9.fs: domain 1 of 1, from 107 to 324: score 98.5, E = 4.3e-27
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerllrrgdekesqavd
                      +  G p+  r++VWa+++  + ++    + Y +l  r  +     + 
    KIAA0019   107    IYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPD-IR 152  

                   kIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvgYcQGMNV
                   +I+ Dv+Rt      F  r  G+ +++L  vL AYs  n +vgYcQGM  
    KIAA0019   153 QIDLDVNRTFRDHIMFRDR-YGVKQQSLFHVLAAYSIYNTEVGYCQGMSQ 201  

                   vaApfLllykSEeqAFyfLdrLl...envvPlKYylpdldGvrlDqkvLd
                   + A +L+ +  Ee+AF+ L +L +++   + + ++       ++ q   +
    KIAA0019   202 ITALLLMYM-NEEDAFWALVKLFsgpKHAMHG-FFVQGFPKLLRFQEHHE 249  

                   sfveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIfDiLF
                   + +   l +L  +L s  +  + + + wf   + +  P    lrI+Di  
    KIAA0019   250 KILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYI 299  

                   adGivllfrvaLAvLkilkeqiLda<-*
                    +G  +l     ++Lk  k  ++     
    KIAA0019   300 FEGERVLTAMSYTILKLHKKHLMKL    324  

PF00566.9.ls: domain 1 of 1, from 107 to 324: score 100.4, E = 4.9e-27
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerllrrgdekesqavd
                      +  G p+  r++VWa+++  + ++    + Y +l  r  +     + 
    KIAA0019   107    IYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPD-IR 152  

                   kIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvgYcQGMNV
                   +I+ Dv+Rt      F  r  G+ +++L  vL AYs  n +vgYcQGM  
    KIAA0019   153 QIDLDVNRTFRDHIMFRDR-YGVKQQSLFHVLAAYSIYNTEVGYCQGMSQ 201  

                   vaApfLllykSEeqAFyfLdrLl...envvPlKYylpdldGvrlDqkvLd
                   + A +L+ +  Ee+AF+ L +L +++   + + ++       ++ q   +
    KIAA0019   202 ITALLLMYM-NEEDAFWALVKLFsgpKHAMHG-FFVQGFPKLLRFQEHHE 249  

                   sfveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIfDiLF
                   + +   l +L  +L s  +  + + + wf   + +  P    lrI+Di  
    KIAA0019   250 KILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYI 299  

                   adGivllfrvaLAvLkilkeqiLda<-*
                    +G  +l     ++Lk  k  ++     
    KIAA0019   300 FEGERVLTAMSYTILKLHKKHLMKL    324  

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