hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16491721/chunk_1/iprscan-20080501-16491721.nocrc
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Query sequence: KIAA0080
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                      217.4    4.6e-64   2
PF00168.20.ls C2 domain                                      221.4    1.9e-63   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/2     229   317 ..     1    88 []   115.4  9.2e-34
PF00168.20.ls   1/2     229   317 ..     1    88 []   117.4  3.8e-32
PF00168.20.fs   2/2     363   452 ..     1    88 []   102.0  9.2e-30
PF00168.20.ls   2/2     363   452 ..     1    88 []   104.0  4.2e-28

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 2, from 229 to 317: score 115.4, E = 9.2e-34
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      L+Vt+ eA++Lp +D+ +  sDPY k+++++dk+ ++ kT+v +ktl
    KIAA0080   229    LVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKR-HRVKTRVLRKTL 274  

                   NPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   +Pv++EtFtF+++p+ +lq+ +L++ V  +drf+rdd++Gev    
    KIAA0080   275 DPVFDETFTFYgIPYSQLQDlVLHFLVLSFDRFSRDDVIGEVM    317  

PF00168.20.ls: domain 1 of 2, from 229 to 317: score 117.4, E = 3.8e-32
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      L+Vt+ eA++Lp +D+ +  sDPY k+++++dk+ ++ kT+v +ktl
    KIAA0080   229    LVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKR-HRVKTRVLRKTL 274  

                   NPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   +Pv++EtFtF+++p+ +lq+ +L++ V  +drf+rdd++Gev    
    KIAA0080   275 DPVFDETFTFYgIPYSQLQDlVLHFLVLSFDRFSRDDVIGEVM    317  

PF00168.20.fs: domain 2 of 2, from 363 to 452: score 102.0, E = 9.2e-30
                   *->LrVtvieAknLppkDkkng.ksDPYVkvylggdkkd.qkkkTkvikk
                      ++V v++A++Lp++D ++g + +PYVkv +   +k+  kkkT+v+k 
    KIAA0080   363    MTVVVLKARHLPKMD-ITGlSGNPYVKVNVYYGRKRiAKKKTHVKKC 408  

                   tlNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   tlNP++NE+F +++p + l + ++e+ V D+dr ++++++G+ +   
    KIAA0080   409 TLNPIFNESFIYDIPTDLLPDiSIEFLVIDFDRTTKNEVVGRLI    452  

PF00168.20.ls: domain 2 of 2, from 363 to 452: score 104.0, E = 4.2e-28
                   *->LrVtvieAknLppkDkkng.ksDPYVkvylggdkkd.qkkkTkvikk
                      ++V v++A++Lp++D ++g + +PYVkv +   +k+  kkkT+v+k 
    KIAA0080   363    MTVVVLKARHLPKMD-ITGlSGNPYVKVNVYYGRKRiAKKKTHVKKC 408  

                   tlNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   tlNP++NE+F +++p + l + ++e+ V D+dr ++++++G+ +   
    KIAA0080   409 TLNPIFNESFIYDIPTDLLPDiSIEFLVIDFDRTTKNEVVGRLI    452  

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