hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16591244/chunk_1/iprscan-20080501-16591244.nocrc
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Query sequence: KIAA0086
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07522.4.ls DNA repair metallo-beta-lactamase              174.2    2.9e-49   1
PF07522.4.fs DNA repair metallo-beta-lactamase              172.5    9.9e-49   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07522.4.fs   1/1     923  1021 ..     1   135 []   172.5  9.9e-49
PF07522.4.ls   1/1     923  1021 ..     1   135 []   174.2  2.9e-49

Alignments of top-scoring domains:
PF07522.4.fs: domain 1 of 1, from 923 to 1021: score 172.5, E = 9.9e-49
                   *->vlTtdesesriHavpmnsleesfkiikasfnsLlelltsyekeydpv
                      ++Ttd+++s +H++pm+++         +f+ L+++l+++  +y+++
    KIAA0086   923    LITTDMCSSLVHLLPMMQI---------NFKGLQSHLKKCGGKYNQI 960  

                   igirPTGWtkskkpkkgkdrskvkSpissikkkvledlkaeRdvdtseav
                   +++rPTGWt+s+k+++++d ++++                          
    KIAA0086   961 LAFRPTGWTHSNKFTRIADVIPQT-------------------------- 984  

                   KldkisiysVPYSEHSSfsELkeFvqflkPkrvIPtVn<-*
                   K ++isiy++PYSEHSS+ E+k+Fvq+lkP+++IPtVn   
    KIAA0086   985 K-GNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN    1021 

PF07522.4.ls: domain 1 of 1, from 923 to 1021: score 174.2, E = 2.9e-49
                   *->vlTtdesesriHavpmnsleesfkiikasfnsLlelltsyekeydpv
                      ++Ttd+++s +H++pm+++         +f+ L+++l+++  +y+++
    KIAA0086   923    LITTDMCSSLVHLLPMMQI---------NFKGLQSHLKKCGGKYNQI 960  

                   igirPTGWtkskkpkkgkdrskvkSpissikkkvledlkaeRdvdtseav
                   +++rPTGWt+s+k+++++d ++++                          
    KIAA0086   961 LAFRPTGWTHSNKFTRIADVIPQT-------------------------- 984  

                   KldkisiysVPYSEHSSfsELkeFvqflkPkrvIPtVn<-*
                   K ++isiy++PYSEHSS+ E+k+Fvq+lkP+++IPtVn   
    KIAA0086   985 K-GNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN    1021 

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