HUGE

Gene/Protein Characteristic Table for KIAA0091

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00405
Accession No. :	D42053
Description :	Membrane-bound transcription factor site-1 protease precursor.
HUGO Gene Name :	membrane-bound transcription factor peptidase, site 1 (MBTPS1)
Clone Name :	ha01032 [Vector Info]
Flexi ORF Clone :	pF1KSDA0091
Source :	Myeloblast cell line (KG-1)

Features of the cloned DNA sequence	Description

Length: 4338 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 683 bp

Genome contig ID gi51511732r_82544872
PolyA signal sequence
(AATAAA,-29)
+----*----+----*----+----*----+----
ATTTTCAATAAATATGTATTACCCGTCTGAAGCTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAGATACTGTGTAACGGACTCTTTCCACTTGTCCCATTTCTCTTTGATG

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 16 r 82644872 82708012 23 99.9 Perfect prediction

Features of the protein sequence	Description

Length: 1058 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
Q14703	100.0	Membrane-bound ...	Homo sapiens
BAF84462	99.9	unnamed protein...	Homo sapiens
XP_001112150	99.7	membrane-bound ...	Macaca mulatta
CAH93329	99.3	hypothetical pr...	Pongo abelii
XP_850300	97.1	similar to Memb...	Canis lupus fam...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

FPrintScan IPR000209 215 234 PR00723 Peptidase S8 and S53

IPR000209 251 264 PR00723 Peptidase S8 and S53

IPR000209 417 433 PR00723 Peptidase S8 and S53

HMMPfam IPR000209 198 470 PF00082 Peptidase S8 and S53

ScanRegExp IPR000209 255 265 PS00137 Peptidase S8 and S53

IPR000209 418 428 PS00138 Peptidase S8 and S53

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000209	215	234	PR00723	Peptidase S8 and S53
IPR000209	251	264	PR00723	Peptidase S8 and S53
IPR000209	417	433	PR00723	Peptidase S8 and S53
HMMPfam	IPR000209	198	470	PF00082	Peptidase S8 and S53
ScanRegExp	IPR000209	255	265	PS00137	Peptidase S8 and S53
IPR000209	418	428	PS00138	Peptidase S8 and S53

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 2 YSLVTMKLVNIWLLLLVVLLCG 23 PRIMARY 22

2 52 EFSSTVVEYEYIVAFNGYFTAK 73 SECONDARY 22

3 1006 QTIPVFAFLGAMVVLAFFVVQIN 1028 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	2	YSLVTMKLVNIWLLLLVVLLCG	23	PRIMARY	22
2	52	EFSSTVVEYEYIVAFNGYFTAK	73	SECONDARY	22
3	1006	QTIPVFAFLGAMVVLAFFVVQIN	1028	PRIMARY	23

Expression profile	Description

: Northern blot Description

Northern blot	Description

RH mapping information	Description

Chromosome No.

: 16

Experimental conditions

Panel name	: Stanford G3
Primer_f	: ACCACAACCTCCGCTATCCAC
Primer_r	: GAAGATGACGAGCGAGAGGCC
PCR product length	: 287 (2.0k) bp
PCR conditions	: 95 °C15 sec66 °C120 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	683 bp
Genome contig ID	gi51511732r_82544872
PolyA signal sequence (AATAAA,-29)	+--------+--------+----*----+---- ATTTTCAATAAATATGTATTACCCGTCTGAAGCTT
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAAGATACTGTGTAACGGACTCTTTCCACTTGTCCCATTTCTCTTTGATG

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	16	r	82644872	82708012	23	99.9	Perfect prediction

Gene/Protein Characteristic Table for KIAA0091

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information