hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17172710/chunk_1/iprscan-20080501-17172710.nocrc
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Query sequence: KIAA0097
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     95.2    1.8e-25  11
PF02985.12.fs HEAT repeat                                     75.3      4e-20  11

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.fs   3/11    440   476 ..     1    36 []    28.2  6.4e-07
PF02985.12.ls   4/11    440   476 ..     1    36 []    30.2  6.8e-06
PF02985.12.ls   9/11   1020  1055 ..     1    36 []    15.2     0.22
PF02985.12.ls  11/11   1367  1403 ..     1    36 []    13.3     0.82

Alignments of top-scoring domains:
PF02985.12.fs: domain 3 of 11, from 440 to 476: score 28.2, E = 6.4e-07
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++l+ +  +llk++nD+ peVR+aA+eaLg+ ++v+   
    KIAA0097   440    KsLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVV    476  

PF02985.12.ls: domain 4 of 11, from 440 to 476: score 30.2, E = 6.8e-06
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++l+ +  +llk++nD+ peVR+aA+eaLg+ ++v+   
    KIAA0097   440    KsLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVV    476  

PF02985.12.ls: domain 9 of 11, from 1020 to 1055: score 15.2, E = 0.22
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++   +p+l ++l+D + +VR+ A  aL  ++ +l   
    KIAA0097  1020    TdLI-LCVPHLYSCLEDRNGDVRKKAQDALPFFMMHL    1055 

PF02985.12.ls: domain 11 of 11, from 1367 to 1403: score 13.3, E = 0.82
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++  + l  +  +++D d  VR aA+++++++++v+   
    KIAA0097  1367    QpTPGKALKEIAVHIGDRDNAVRNAALNTIVTVYNVH    1403 

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