hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17223499/chunk_1/iprscan-20080501-17223499.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0100
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06039.5.fs Malate:quinone oxidoreductase (Mqo)             16.2    0.00012   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF06039.5.fs   1/1     886   910 ..   468   492 .]    16.2  0.00012

Alignments of top-scoring domains:
PF06039.5.fs: domain 1 of 1, from 886 to 910: score 16.2, E = 0.00012
                   *->YGkkLnedpeltreiraytskaLqL<-*
                      +++kL++++el++ + ++++k+LqL   
    KIAA0100   886    FEVKLHDNYELMKDESKESAKRLQL    910  

//