# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha00623.fasta.nr -Q ../query/KIAA0108.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0108, 254 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826817 sequences Expectation_n fit: rho(ln(x))= 4.7291+/-0.000188; mu= 11.0003+/- 0.011 mean_var=72.8905+/-14.361, 0's: 44 Z-trim: 46 B-trim: 781 in 1/65 Lambda= 0.150224 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|3122413|sp|Q15012.1|LAP4A_HUMAN RecName: Full=L ( 233) 1595 354.4 9.6e-96 gi|13111971|gb|AAH03158.1| Lysosomal protein trans ( 233) 1591 353.5 1.8e-95 gi|75075710|sp|Q4R4I5.1|LAP4A_MACFA RecName: Full= ( 233) 1586 352.4 3.7e-95 gi|75043917|sp|Q6QRN8.1|LAP4A_BOVIN RecName: Full= ( 233) 1579 350.9 1.1e-94 gi|82074509|sp|Q5EI37.1|LAP4A_GECJA RecName: Full= ( 233) 1573 349.6 2.6e-94 gi|81885191|sp|Q6P501.1|LAP4A_RAT RecName: Full=Ly ( 233) 1572 349.4 3e-94 gi|149050909|gb|EDM03082.1| lysosomal-associated p ( 308) 1572 349.5 3.7e-94 gi|26344493|dbj|BAC35897.1| unnamed protein produc ( 233) 1567 348.3 6.4e-94 gi|109689716|ref|NP_032666.2| lysosomal-associated ( 308) 1567 348.4 7.9e-94 gi|3122416|sp|Q60961.1|LAP4A_MOUSE RecName: Full=L ( 233) 1552 345.1 6.1e-93 gi|149727742|ref|XP_001503403.1| PREDICTED: simila ( 233) 1544 343.3 2e-92 gi|149641367|ref|XP_001505310.1| PREDICTED: hypoth ( 230) 1486 330.8 1.2e-88 gi|197128714|gb|ACH45212.1| putative lysosomal-ass ( 229) 1431 318.8 4.8e-85 gi|82083030|sp|Q5ZML7.1|LAP4A_CHICK RecName: Full= ( 229) 1426 317.8 1e-84 gi|37183174|gb|AAQ89387.1| MTP [Homo sapiens] ( 215) 1391 310.1 1.8e-82 gi|30027165|gb|AAP06758.1| lysosomal-associated pr ( 233) 1353 301.9 5.9e-80 gi|109102129|ref|XP_001094866.1| PREDICTED: simila ( 211) 1335 298.0 8.2e-79 gi|62630193|gb|AAX88938.1| unknown [Homo sapiens] ( 196) 1320 294.7 7.4e-78 gi|26379552|dbj|BAB29087.2| unnamed protein produc ( 197) 1308 292.1 4.5e-77 gi|37590177|gb|AAH58878.1| Lysosomal-associated pr ( 229) 1298 290.0 2.3e-76 gi|55251328|emb|CAH69126.1| lysosomal-associated p ( 238) 1298 290.0 2.3e-76 gi|47208831|emb|CAF90335.1| unnamed protein produc ( 230) 1295 289.4 3.6e-76 gi|114576331|ref|XP_001138771.1| PREDICTED: lysoso ( 191) 1293 288.9 4.2e-76 gi|49257726|gb|AAH74539.1| MGC69213 protein [Xenop ( 231) 1275 285.0 7.2e-75 gi|209155470|gb|ACI33967.1| Lysosomal-associated t ( 245) 1241 277.7 1.2e-72 gi|56270472|gb|AAH87426.1| LOC496032 protein [Xeno ( 231) 1239 277.2 1.6e-72 gi|49118319|gb|AAH73327.1| MGC80735 protein [Xenop ( 231) 1218 272.7 3.8e-71 gi|197128718|gb|ACH45216.1| putative lysosomal-ass ( 182) 1123 252.0 5e-65 gi|114576319|ref|XP_001138597.1| PREDICTED: lysoso ( 223) 1072 241.0 1.2e-61 gi|28189693|dbj|BAC56461.1| similar to lysosomal-a ( 149) 1010 227.4 1e-57 gi|119621238|gb|EAX00833.1| lysosomal-associated p ( 144) 913 206.4 2.1e-51 gi|119621240|gb|EAX00835.1| lysosomal-associated p ( 122) 804 182.7 2.4e-44 gi|75045086|sp|Q71SV0.1|LAP4B_BOVIN RecName: Full= ( 226) 729 166.7 3e-39 gi|151554322|gb|AAI49606.1| Lysosomal protein tran ( 226) 729 166.7 3e-39 gi|14582685|gb|AAK69595.1|AF317417_1 lysosomal-ass ( 226) 720 164.7 1.1e-38 gi|75076351|sp|Q4R6E8.1|LAP4B_MACFA RecName: Full= ( 226) 719 164.5 1.3e-38 gi|117646200|emb|CAL38567.1| hypothetical protein ( 226) 719 164.5 1.3e-38 gi|7320865|emb|CAB81951.1| integral membrane trans ( 283) 720 164.8 1.3e-38 gi|52545609|emb|CAB66876.2| hypothetical protein [ ( 287) 720 164.8 1.4e-38 gi|30039270|gb|AAP14034.1| lysosomal associated tr ( 317) 720 164.9 1.5e-38 gi|118087175|ref|XP_001233339.1| PREDICTED: hypoth ( 224) 718 164.3 1.5e-38 gi|74714056|sp|Q86VI4.1|LAP4B_HUMAN RecName: Full= ( 370) 720 165.0 1.6e-38 gi|114637784|ref|XP_508462.2| PREDICTED: similar t ( 307) 717 164.2 2.2e-38 gi|81879687|sp|Q91XQ6.1|LAP4B_MOUSE RecName: Full= ( 227) 715 163.7 2.4e-38 gi|73974060|ref|XP_532277.2| PREDICTED: similar to ( 393) 716 164.1 3.1e-38 gi|29561810|emb|CAD87806.1| lysosomal associated p ( 225) 711 162.8 4.4e-38 gi|73909107|gb|AAH38117.1| LAPTM4B protein [Homo s ( 317) 712 163.2 4.8e-38 gi|81883433|sp|Q5U1W4.1|LAP4B_RAT RecName: Full=Ly ( 227) 707 161.9 8.1e-38 gi|169642566|gb|AAI60779.1| LOC100158325 protein [ ( 225) 704 161.3 1.3e-37 gi|47217882|emb|CAG05004.1| unnamed protein produc ( 232) 675 155.0 1e-35 >>gi|3122413|sp|Q15012.1|LAP4A_HUMAN RecName: Full=Lysos (233 aa) initn: 1595 init1: 1595 opt: 1595 Z-score: 1875.1 bits: 354.4 E(): 9.6e-96 Smith-Waterman score: 1595; 100.000% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::::::::::::::::::::::::::::::::::::: gi|312 MVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :::::::::::::: gi|312 KMPEKEPPPPYLPA 220 230 >>gi|13111971|gb|AAH03158.1| Lysosomal protein transmemb (233 aa) initn: 1591 init1: 1591 opt: 1591 Z-score: 1870.4 bits: 353.5 E(): 1.8e-95 Smith-Waterman score: 1591; 99.571% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::::::::::::::::::::::::::::::::::::: gi|131 MVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 GSISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :::::::::::::: gi|131 KMPEKEPPPPYLPA 220 230 >>gi|75075710|sp|Q4R4I5.1|LAP4A_MACFA RecName: Full=Lyso (233 aa) initn: 1586 init1: 1586 opt: 1586 Z-score: 1864.6 bits: 352.4 E(): 3.7e-95 Smith-Waterman score: 1586; 99.142% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.:::::::::::::::::::::::::::::: gi|750 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :::::::::::::: gi|750 KMPEKEPPPPYLPA 220 230 >>gi|75043917|sp|Q6QRN8.1|LAP4A_BOVIN RecName: Full=Lyso (233 aa) initn: 1579 init1: 1579 opt: 1579 Z-score: 1856.4 bits: 350.9 E(): 1.1e-94 Smith-Waterman score: 1579; 98.283% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.:::::::::::::::::::::::::::::: gi|750 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|750 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNMPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :::::::::::.:: gi|750 KMPEKEPPPPYIPA 220 230 >>gi|82074509|sp|Q5EI37.1|LAP4A_GECJA RecName: Full=Lyso (233 aa) initn: 1573 init1: 1573 opt: 1573 Z-score: 1849.4 bits: 349.6 E(): 2.6e-94 Smith-Waterman score: 1573; 97.854% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.:::::::::::::::::::::::::::::: gi|820 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|820 NLLMAILLTVEVTHPNSVPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|820 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|820 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNMPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :::::::::::.:: gi|820 KMPEKEPPPPYIPA 220 230 >>gi|81885191|sp|Q6P501.1|LAP4A_RAT RecName: Full=Lysoso (233 aa) initn: 1572 init1: 1572 opt: 1572 Z-score: 1848.2 bits: 349.4 E(): 3e-94 Smith-Waterman score: 1572; 97.854% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.:::::::::::::::::::::::::::::: gi|818 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV ::::::::::..:::::::::::::::::::::::::::::::::::::::::::::::: gi|818 CLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :.:::::::::::: gi|818 KIPEKEPPPPYLPA 220 230 >>gi|149050909|gb|EDM03082.1| lysosomal-associated prote (308 aa) initn: 1572 init1: 1572 opt: 1572 Z-score: 1846.6 bits: 349.5 E(): 3.7e-94 Smith-Waterman score: 1572; 97.854% identity (100.000% similar) in 233 aa overlap (22-254:76-308) 10 20 30 40 50 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTI ::::.:::.::::::::::::::::::::: gi|149 GQRRRVVWVEPLGRKLLSGAWARARPTRFPMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 50 60 70 80 90 100 60 70 80 90 100 110 KIAA01 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 110 120 130 140 150 160 120 130 140 150 160 170 KIAA01 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 170 180 190 200 210 220 180 190 200 210 220 230 KIAA01 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY :::::::::::::::::::..::::::::::::::::::::::::::::::::::::::: gi|149 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY 230 240 250 260 270 280 240 250 KIAA01 VLPTYEMAVKMPEKEPPPPYLPA ::::::::::.:::::::::::: gi|149 VLPTYEMAVKIPEKEPPPPYLPA 290 300 >>gi|26344493|dbj|BAC35897.1| unnamed protein product [M (233 aa) initn: 1567 init1: 1567 opt: 1567 Z-score: 1842.3 bits: 348.3 E(): 6.4e-94 Smith-Waterman score: 1567; 97.425% identity (100.000% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.:::::::::::::::::::::::::::::: gi|263 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV ::::::::::..::::::::::::::::::::::::::::::::::.::::::::::::: gi|263 CLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :.:::::::::::: gi|263 KIPEKEPPPPYLPA 220 230 >>gi|109689716|ref|NP_032666.2| lysosomal-associated pro (308 aa) initn: 1567 init1: 1567 opt: 1567 Z-score: 1840.8 bits: 348.4 E(): 7.9e-94 Smith-Waterman score: 1567; 97.425% identity (100.000% similar) in 233 aa overlap (22-254:76-308) 10 20 30 40 50 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTI ::::.:::.::::::::::::::::::::: gi|109 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 50 60 70 80 90 100 60 70 80 90 100 110 KIAA01 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 110 120 130 140 150 160 120 130 140 150 160 170 KIAA01 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 170 180 190 200 210 220 180 190 200 210 220 230 KIAA01 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY :::::::::::::::::::..::::::::::::::::::::::::::::::::::.:::: gi|109 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY 230 240 250 260 270 280 240 250 KIAA01 VLPTYEMAVKMPEKEPPPPYLPA ::::::::::.:::::::::::: gi|109 VLPTYEMAVKIPEKEPPPPYLPA 290 300 >>gi|3122416|sp|Q60961.1|LAP4A_MOUSE RecName: Full=Lysos (233 aa) initn: 1552 init1: 1552 opt: 1552 Z-score: 1824.8 bits: 345.1 E(): 6.1e-93 Smith-Waterman score: 1552; 96.996% identity (99.571% similar) in 233 aa overlap (22-254:1-233) 10 20 30 40 50 60 KIAA01 VWLRVENVCQGPGQEGGPPVTMVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVV ::::.:::.::::::::::::: :::::::::::::::: gi|312 MVSMTFKRSRSDRFYSTRCCGCFHVRTGTIILGTWYMVV 10 20 30 70 80 90 100 110 120 KIAA01 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 NLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 GAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSS 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 CLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAV ::::::::::..::::::::::::::::::::::::::::::::::.::::::::::::: gi|312 CLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQYVLPTYEMAV 160 170 180 190 200 210 250 KIAA01 KMPEKEPPPPYLPA :.:::::::::::: gi|312 KIPEKEPPPPYLPA 220 230 254 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 21:27:24 2009 done: Tue Mar 3 21:33:10 2009 Total Scan time: 1332.460 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]