hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17354330/chunk_1/iprscan-20080501-17354330.nocrc
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Query sequence: KIAA0108
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00799 mtp: Golgi 4-transmembrane spanning transpor   542.2   1.8e-160   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00799   1/1      31   254 .]     1   263 []   542.2 1.8e-160

Alignments of top-scoring domains:
TIGR00799: domain 1 of 1, from 31 to 254: score 542.2, E = 1.8e-160
                   *->RsdrvrqTRCCGCfnvRvaTiaLaiyyvvvsvLlfIeltVEVahGkn
                      Rsdr+++TRCCGC++vR++Ti+L+++y+vv++L++I+ltVEV+h +n
    KIAA0108    31    RSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTH-PN 76   

                   ScklvniqYlriadllSSefllinalvlisvSlLmgvvknREkyllpflS
                   S+++vniqY++i++++SSe++++na+vl++vS+Lm+++++  +++++++S
    KIAA0108    77 SMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISS--MLVYGAIS 124  

                   lQimDyLLCLLTLLGSYiELPAYLKLARsRassskiPlmtlqLlDFvLSi
                   +Q++                             ++iP+++++L+DFvLS+
    KIAA0108   125 YQVG-----------------------------WLIPFFCYRLFDFVLSC 145  

                   LvliSSymevPTYlnfkslnhlnylPskedllhlqfiklllIvsvaFitv
                   Lv+iSS++++P  +++++l++l+++P+k+dll+l++++ll+Iv+v+F+++
    KIAA0108   146 LVAISSLTYLP--RIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFALF 193  

                   lIfKvYlfkCVwnCYkyiknmNsPeiaekpaskmlpkvvLPsYEeAlslP
                   +IfK+Yl++CVwnCYkyi+n+N+Peia++pa++++p++vLP+YE+A+++P
    KIAA0108   194 IIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAVKMP 243  

                   eKtPEGdPAPPPYsev<-*
                   eK+P     PPPY+++   
    KIAA0108   244 EKEP-----PPPYLPA    254  

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