hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18014977/chunk_1/iprscan-20080501-18014977.nocrc
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Query sequence: KIAA0124
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 150.8    1.4e-40   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/7     338   377 ..     1    46 []    46.2  4.3e-09
SM00320    2/7     380   419 ..     1    46 []     7.9       28
SM00320    3/7     458   501 ..     1    46 []     0.7  3.9e+02
SM00320    4/7     504   542 ..     1    46 []    11.7      6.9
SM00320    5/7     545   584 ..     1    46 []    22.3    0.066
SM00320    6/7     588   627 ..     1    46 []    34.3  1.6e-05
SM00320    7/7     639   682 .]     1    46 []    27.8   0.0015

Alignments of top-scoring domains:
SM00320: domain 1 of 7, from 338 to 377: score 46.2, E = 4.3e-09
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++ +  +++gH++   V+++++sp g      ++l+sgs+Dg++rlW
    KIAA0124   338    PtCQALVYRGHSD--LVRCLSVSPGG------QWLVSGSdDGSLRLW 376  

                   d<-*
                   +   
    KIAA0124   377 E    377  

SM00320: domain 2 of 7, from 380 to 419: score 7.9, E = 28
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t +++rt +   g   V sva++p+        +l+++    ++ l 
    KIAA0124   380    TaRCVRTVP-VGG--VVKSVAWNPSP-----AVCLVAAAvEDSVLLL 418  

                   d<-*
                   +   
    KIAA0124   419 N    419  

SM00320: domain 3 of 7, from 458 to 501: score 0.7, E = 3.9e+02
                   *->t.kllrtlk.gHtgespVtsvafspdggssdspnllasgs.Dgt...
                      ++++   l+ +H +  pVt v+++  g      ++la+      +++
    KIAA0124   458    ErQVGLRLRiCHGK--PVTQVTWHGRG------DYLAVVLaTQGhtq 496  

                   irlWd<-*
                   + +     
    KIAA0124   497 VLIHQ    501  

SM00320: domain 4 of 7, from 504 to 542: score 11.7, E = 6.9
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgsDgtirlWd
                       ++  + ++   g   V  vaf+p         +l+++s +++rl++
    KIAA0124   504    RrRSQSPFRHSHG--QVQRVAFHPAR------PFLLVASQRSVRLYH 542  

                   <-*
                      
    KIAA0124     -     -    

SM00320: domain 5 of 7, from 545 to 584: score 22.3, E = 0.066
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       ++l+++l    +  +V+s+a++p g      + +++gs D+++  +
    KIAA0124   545    RqELTKKLMPNCK--WVSSLAVHPAG------DNVICGSyDSKLVWF 583  

                   d<-*
                   d   
    KIAA0124   584 D    584  

SM00320: domain 6 of 7, from 588 to 627: score 34.3, E = 1.6e-05
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++k+ r l+ H++  + ++vaf+p         l+asgs+Dg++ + 
    KIAA0124   588    StKPYRMLRHHKK--ALRAVAFHPRY------PLFASGSdDGSVIVC 626  

                   d<-*
                   +   
    KIAA0124   627 H    627  

SM00320: domain 7 of 7, from 639 to 682: score 27.8, E = 0.0015
                   *->t.kllrtlkgHtge..spVtsvafspdggssdspnllasgs.Dgtir
                         ++++lkgH  +++ +V++v f+p+        +++s++ Dgt+r
    KIAA0124   639    LlVPVKVLKGHVLTrdLGVLDVIFHPTQ------PWVFSSGaDGTVR 679  

                   lWd<-*
                   l+    
    KIAA0124   680 LFT    682  

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