hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-18464646/chunk_1/iprscan-20080501-18464646.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0151 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.fs Protein kinase domain 162.4 5.1e-46 1 PF00069.15.ls Protein kinase domain 137.7 2.9e-38 1 PF07714.7.fs Protein tyrosine kinase 47.6 1e-13 1 PF01163.12.ls RIO1 family -69.2 0.0006 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 16 228 .. 1 213 [. 162.4 5.1e-46 PF07714.7.fs 1/1 16 143 .. 1 139 [. 47.6 1e-13 PF00069.15.ls 1/1 16 318 .. 1 287 [] 137.7 2.9e-38 PF01163.12.ls 1/1 29 177 .. 1 203 [] -69.2 0.0006 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 16 to 228: score 162.4, E = 5.1e-46 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +++ lG+G+ ++Vyka++k++g++VAvK+++ + + + r KIAA0151 16 WHTDDLLGQGATASVYKARNKKSGELVAVKVFNTTSYLRPREVQVR- 61 lsEiqilkrLsHpNIvrlidvfed..kdhlylVlEycegGLrvldLfdyl E ++l++L+H NIv+l+ v e+++++ lV+Eyc G +L ++l KIAA0151 62 --EFEVLRKLNHQNIVKLFAVEETggSRQKVLVMEYCSSG----SLLSVL 105 setrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnn + ++++ ++ede +++ ++ g+++L +ngi+HRD+KP NI+ KIAA0151 106 E--SPENAFGLPEDEFLVVLRCVVAGMNHLRENGIVHRDIKPGNIMRL-V 152 gvvda.flKiaDFGlAkklst.sss.lttfvGTpwYmAP...Ev..ll.. g+ + ++ K++DFG A+ ++ ++++ ++ GT +Y+ P+ E l+++ KIAA0151 153 GEEGQsIYKLTDFGAARE--LdDDEkFVSVYGTEEYLHPdmyERavLRkp 200 ggngygtkvDvWSlGvilyelltGkpPF<-* ++ g vD WS+Gv+ly +tG +PF KIAA0151 201 QQKAFGVTVDLWSIGVTLYHAATGSLPF 228 PF07714.7.fs: domain 1 of 1, from 16 to 143: score 47.6, E = 1e-13 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie + + LG+Ga +Vyk++ k + + VAVK+ + ++ + KIAA0151 16 WHTDDLLGQGATASVYKARNK----KSGELVAVKVFNT-TSYLRP-- 55 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL re rE ++++kl +H+NiV+L +v g + +V+Ey+ G+L KIAA0151 56 REVQVREFEVLRKL-NHQNIVKLFAVEETGGSRQ---KVLVMEYCSSGSL 101 ldfLrkhregrpLtlkd..LlsfalQiAkGMeYLesknfvHRDL<-* l+ L ++ ++++ l++++ l + + +GM++L ++++vHRD+ KIAA0151 102 LSVLESP--ENAFGLPEdeFLVVLRCVVAGMNHLRENGIVHRDI 143 PF00069.15.ls: domain 1 of 1, from 16 to 318: score 137.7, E = 2.9e-38 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +++ lG+G+ ++Vyka++k++g++VAvK+++ + + + r KIAA0151 16 WHTDDLLGQGATASVYKARNKKSGELVAVKVFNTTSYLRPREVQVR- 61 lsEiqilkrLsHpNIvrlidvfed..kdhlylVlEycegGLrvldLfdyl E ++l++L+H NIv+l+ v e+++++ lV+Eyc G +L ++l KIAA0151 62 --EFEVLRKLNHQNIVKLFAVEETggSRQKVLVMEYCSSG----SLLSVL 105 setrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnn + ++++ ++ede +++ ++ g+++L +ngi+HRD+KP NI+ KIAA0151 106 E--SPENAFGLPEDEFLVVLRCVVAGMNHLRENGIVHRDIKPGNIMRL-V 152 gvvda.flKiaDFGlAkklst.sss.lttfvGTpwYmAP...Ev..ll.. g+ + ++ K++DFG A+ ++ ++++ ++ GT +Y+ P+ E l+++ KIAA0151 153 GEEGQsIYKLTDFGAARE--LdDDEkFVSVYGTEEYLHPdmyERavLRkp 200 ggngygtkvDvWSlGvilyelltGk...pPFsgevqdsldqlqlirkilg ++ g vD WS+Gv+ly +tG + PF g ++ ++++++i KIAA0151 201 QQKAFGVTVDLWSIGVTLYHAATGSlpfIPFGGP----RRNKEIMYRITT 246 pplefdspewdsisrsefr............r.l.pnlseeakdLikkcL +++ + ++ +++ + + + + + +l+ l + + ++ ++L KIAA0151 247 EKPAGAIAGAQRRE----NgplewsytlpitCqLsLGLQSQLVPILANIL 292 nkDPskRlt.......aeeilqHPwf<-* ++ +k ++ ++ + +ilq + KIAA0151 293 EVEQAKCWGfdqffaeTSDILQRVVV 318 PF01163.12.ls: domain 1 of 1, from 29 to 177: score -69.2, E = 0.0006 *->nVYhAvsyaedgedptevAvKiyrtgtteFkk.rkkYrdgdfRFrdr VY+A++ +ge vAvK++ tt++ ++r+ + r KIAA0151 29 SVYKARN-KKSGE---LVAVKVF--NTTSYLRpREVQVREFEVLR-- 67 ksktnwrklvrlWAeKEfrNLkRLyeaGvpVPkPiavnrhvLVMEFigdk k n++ +v+ L + +e G + + vLVME+++ KIAA0151 68 --KLNHQNIVK---------LFAVEETG-------GSRQKVLVMEYCS-- 97 dGvpAPrLkdveleldlseeeaeelydeiirEymrrlYkeagLVHGDLSE G + L e + l+e+e+ +++ ++ m l e g+VH D KIAA0151 98 SGSLLSVLESPENAFGLPEDEFLVVLRCVVA-GMNHLR-ENGIVHRDIKP 145 YNv..LvhddgkpviIDvsQaVeldHPnAlefLeRDieNiinFFrrkgvd N+ +Lv ++ +Q+ + + +F + + d KIAA0151 146 GNImrLVGEE--------GQSIY---------------KLTDFGAARELD 172 krvvdfrel<-* d +++ KIAA0151 173 ----DDEKF 177 //