hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-18464646/chunk_1/iprscan-20080501-18464646.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0151 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00220 175.7 4.4e-48 1 SM00219 -7.0 1.1e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00219 1/1 16 332 .. 1 280 [] -7.0 1.1e-10 SM00220 1/1 16 318 .. 1 231 [] 175.7 4.4e-48 Alignments of top-scoring domains: SM00219: domain 1 of 1, from 16 to 332: score -7.0, E = 1.1e-10 *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda....keeFlrE + ++ LG Ga Vyk++ k++++ VAVK+ + + +++e rE KIAA0151 16 WHTDDLLGQGATASVYKARNKksgELVAVKVFNTTSylrpREVQVRE 62 akiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyL ++++kl +H+NiVkL++v ++g + +vmEy++ G+Ll+ L KIAA0151 63 FEVLRKL--NHQNIVKLFAVEETGGS-----RQKVLVMEYCSSGSLLSVL 105 rknrpk..lslsdLlsfAlQIAkGMeYLesknfvHRDLAARNc..Lvgen ++++ +l+ +++l + +GM++L ++++vHRD+ N+ +Lvge+ KIAA0151 106 ESPENAfgLPEDEFLVVLRCVVAGMNHLRENGIVHRDIKPGNImrLVGEE 155 k..vvKIsDFGLsRdlyddDkkG.........eskdyYrkkggkggktll ++++ K +DFG +R+l+dd +k + ++++ d+Y + +k KIAA0151 156 GqsIYKLTDFGAARELDDD-EKFvsvygteeyLHPDMYERAV--LRK--- 199 PirWmAPEslkdgkFtskSDVWSFGVlLWEift..lGeqPYpgeiqqfms + + F D WS GV+L+ t++l P g+ KIAA0151 200 ---------PQQKAFGVTVDLWSIGVTLYHAATgsLPFIPFGGP----RR 236 neevleylkkGyRlpkPendlpiS.......................... n+e++ ++ + kP+ + + +++++++ + + + + + + + KIAA0151 237 NKEIMYRITTE----KPAG----Aiagaqrrengplewsytlpitcqlsl 278 ..........................s.vtCPdelYdlMlqCWaedPedR + +++ + + + ++ + + +++ + +d l ++ KIAA0151 279 glqsqlvpilanileveqakcwgfdqFfAETSDILQRVVVHVFSL----- 323 PtFselverl<-* + + l+++ KIAA0151 324 -SQAVLHHIY 332 SM00220: domain 1 of 1, from 16 to 318: score 175.7, E = 4.4e-48 *->YellkklGkGaFGkVylardkktgrlvAiKvik........erilrE ++ ++lG+Ga ++Vy+ar+kk+g+lvA+Kv ++++ +++e rE KIAA0151 16 WHTDDLLGQGATASVYKARNKKSGELVAVKVFNttsylrprEVQVRE 62 ikiLkk.dHPNIVkLydvfed...dklylVmEyceGdlGdLfdllkkrgr ++L+k +H NIVkL+ v e++++ lVmEyc+ G+L+++l++ KIAA0151 63 FEVLRKlNHQNIVKLFAVEETggsRQKVLVMEYCSS--GSLLSVLESPEN 110 rglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..... ++l+E+e ++r ++ ++++L ++gI+HRD+KP Ni+ +++++ KIAA0151 111 A---FGLPEdEFLVVLRCVVAGMNHLRENGIVHRDIKPGNIMRLVgeegq 157 .hvKlaDFGlArql......ttfvGTpeYmAPEvl...........gYgk + Kl+DFG Ar+l+++++ ++ GT eY+ P + ++ ++++++ +g KIAA0151 158 sIYKLTDFGAARELdddekfVSVYGTEEYLHPDMYeravlrkpqqkAFGV 207 pavDiWSlGcilyElltGkpPFp.......qldlifkkig.......... vD WS+G++ly +tG PF + ++++++ + ++++ +++ + + KIAA0151 208 -TVDLWSIGVTLYHAATGSLPFIpfggprrNKEIMYRITTekpagaiaga 256 ........................SpeakdLikklLvkdPekRlta.eaL ++++++ +++++ + + + + +++ ++ ++L+++ +k ++ ++ + KIAA0151 257 qrrengplewsytlpitcqlslglQSQLVPILANILEVEQAKCWGFdQFF 306 edeldikaHPff<-* ++ +di + + KIAA0151 307 AETSDILQRVVV 318 //