hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19001057/chunk_1/iprscan-20080501-19001057.nocrc
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Query sequence: KIAA0159
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     27.7    3.9e-05   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   1/4     364   400 ..     1    36 []    11.8      1.4

Alignments of top-scoring domains:
PF02985.12.ls: domain 1 of 4, from 364 to 400: score 11.8, E = 1.4
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++d++l++l+ + +D ++ VR  +++ +++++++    
    KIAA0159   364    RdTRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQK    400  

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