hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-19263675/chunk_1/iprscan-20080501-19263675.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0175 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 333.2 4e-97 1 PF00069.15.fs Protein kinase domain 331.4 1.5e-96 1 PF07714.7.fs Protein tyrosine kinase 80.8 2.4e-23 2 PF02149.10.fs Kinase associated domain 1 85.1 2.4e-23 1 PF02149.10.ls Kinase associated domain 1 87.1 5.1e-23 1 PF07714.7.ls Protein tyrosine kinase 69.1 1.3e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07714.7.ls 1/1 16 266 .. 1 272 [] 69.1 1.3e-17 PF00069.15.fs 1/1 16 268 .. 1 287 [] 331.4 1.5e-96 PF07714.7.fs 1/2 16 138 .. 1 139 [. 69.7 3.8e-20 PF00069.15.ls 1/1 16 268 .. 1 287 [] 333.2 4e-97 PF07714.7.fs 2/2 181 229 .. 184 234 .. 11.1 0.004 PF02149.10.ls 1/1 607 656 .] 1 50 [] 87.1 5.1e-23 PF02149.10.fs 1/1 607 656 .] 1 50 [] 85.1 2.4e-23 Alignments of top-scoring domains: PF07714.7.ls: domain 1 of 1, from 16 to 266: score 69.1, E = 1.3e-17 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei +l +++G G F +V ++ t+ VA+K+++k+ + ++ KIAA0175 16 YELHETIGTGGFAKVKLACHI----LTGEMVAIKIMdKN-TLGSD-- 55 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd + E++ +k+l +H++i +L+ v +++V+Ey++gG KIAA0175 56 -LPRIKTEIEALKNL-RHQHICQLYHVLET-ANK----IFMVLEYCPGGE 98 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d+ + +++L+ ++ +Qi ++ +Y +s+++ HRDL N L KIAA0175 99 LFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF 145 senlvVKIsDFGLaRdi.ynddyYvrkkgggklPvkWmAPEslkygk.Ft +e ++ K DFGL+ + n+dy ++ g l APE ++ + KIAA0175 146 DEYHKLKLIDFGLCAKPkGNKDYH-LQTCCGSL--AYAAPELIQGKSyLG 192 skSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCP s+ DVWS G+lL+ ++ G P + + + +++++ + y p+ + KIAA0175 193 SEADVWSMGILLYVLMC-GFLP-FDDDNVMALYKKIMRGKYDVPKWL--S 238 delYdlMlqCWaedPedRPtFselveeL<-* + l++q + dP++R +++ l+++ KIAA0175 239 PSSILLLQQMLQVDPKKRISMKNLLNHP 266 PF00069.15.fs: domain 1 of 1, from 16 to 268: score 331.4, E = 1.5e-96 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr yel+e++G G+f++V++a+h+ tg++VA+Ki++k + s+ +++++ KIAA0175 16 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT- 61 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse Ei+ lk+L+H +I++l++v e+ +++ +VlEyc+gG +Lfdy+ KIAA0175 62 --EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG----ELFDYII- 104 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ +l se+e + +++Qi+++++Y Hs+g HRDLKPeN+L+d +++ KIAA0175 105 --SQDRL--SEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYH 149 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD lK++DFGl++k + +++ +l+t +G++ Y+APE+++g ++ g+++D KIAA0175 150 K---LKLIDFGLCAKPKGnKDYhLQTCCGSLAYAAPELIQGKSYLGSEAD 196 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi vWS+G++ly l++G +PF+++ + ++l++ki++++++ + + + KIAA0175 197 VWSMGILLYVLMCGFLPFDDD-----NVMALYKKIMRGKYDVPKWLS--- 238 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++ + L+ +L++DP+kR++ + +l+HPw+ KIAA0175 239 ------------PSSILLLQQMLQVDPKKRISMKNLLNHPWI 268 PF07714.7.fs: domain 1 of 2, from 16 to 138: score 69.7, E = 3.8e-20 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei +l +++G G F +V ++ t+ VA+K+++k+ + ++ KIAA0175 16 YELHETIGTGGFAKVKLACHI----LTGEMVAIKIMdKN-TLGSD-- 55 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd + E++ +k+l +H++i +L+ v +++V+Ey++gG KIAA0175 56 -LPRIKTEIEALKNL-RHQHICQLYHVLET-ANK----IFMVLEYCPGGE 98 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDL<-* L d+ + +++L+ ++ +Qi ++ +Y +s+++ HRDL KIAA0175 99 LFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDL 138 PF00069.15.ls: domain 1 of 1, from 16 to 268: score 333.2, E = 4e-97 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr yel+e++G G+f++V++a+h+ tg++VA+Ki++k + s+ +++++ KIAA0175 16 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT- 61 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse Ei+ lk+L+H +I++l++v e+ +++ +VlEyc+gG +Lfdy+ KIAA0175 62 --EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG----ELFDYII- 104 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ +l se+e + +++Qi+++++Y Hs+g HRDLKPeN+L+d +++ KIAA0175 105 --SQDRL--SEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYH 149 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD lK++DFGl++k + +++ +l+t +G++ Y+APE+++g ++ g+++D KIAA0175 150 K---LKLIDFGLCAKPKGnKDYhLQTCCGSLAYAAPELIQGKSYLGSEAD 196 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi vWS+G++ly l++G +PF+++ + ++l++ki++++++ + + + KIAA0175 197 VWSMGILLYVLMCGFLPFDDD-----NVMALYKKIMRGKYDVPKWLS--- 238 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++ + L+ +L++DP+kR++ + +l+HPw+ KIAA0175 239 ------------PSSILLLQQMLQVDPKKRISMKNLLNHPWI 268 PF07714.7.fs: domain 2 of 2, from 181 to 229: score 11.1, E = 0.004 *->APEslkygk.FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlel APE ++ + s+ DVWS G+lL+ ++ G P + + + ++++ KIAA0175 181 APELIQGKSyLGSEADVWSMGILLYVLMC-GFLP-FDDDNVMALYKK 225 lyedG<-* + ++G KIAA0175 226 I-MRG 229 PF02149.10.ls: domain 1 of 1, from 607 to 656: score 87.1, E = 5.1e-23 *->ddksksvvkFEiqlyKlprldlyGvdfqRisGpqwlFkdLcsailne +d++k++++FE+++++l+++d++G+++qR++G++w++k+L+++il++ KIAA0175 607 SDFGKVTMQFELEVCQLQKPDVVGIRRQRLKGDAWVYKRLVEDILSS 653 Lkv<-* +kv KIAA0175 654 CKV 656 PF02149.10.fs: domain 1 of 1, from 607 to 656: score 85.1, E = 2.4e-23 *->ddksksvvkFEiqlyKlprldlyGvdfqRisGpqwlFkdLcsailne +d++k++++FE+++++l+++d++G+++qR++G++w++k+L+++il++ KIAA0175 607 SDFGKVTMQFELEVCQLQKPDVVGIRRQRLKGDAWVYKRLVEDILSS 653 Lkv<-* +kv KIAA0175 654 CKV 656 //