hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19263675/chunk_1/iprscan-20080501-19263675.nocrc
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Query sequence: KIAA0175
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 365.8   2.7e-105   1
SM00219                                                  47.3    4.6e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      16   268 ..     1   280 []    47.3  4.6e-14
SM00220    1/1      16   268 ..     1   231 []   365.8 2.7e-105

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 16 to 268: score 47.3, E = 4.6e-14
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda....keeFlrE
                       +l +++G G F +V ++  + ++++VA+K + +++ ++++  +  E
    KIAA0175    16    YELHETIGTGGFAKVKLACHIltgEMVAIKIMDKNTlgsdLPRIKTE 62   

                   akiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyL
                   ++ +k+l  +H++i +L+ v  +          +++v+Ey++gG L dy+
    KIAA0175    63 IEALKNL--RHQHICQLYHVLETA-------NKIFMVLEYCPGGELFDYI 103  

                   rknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvvK
                    +  + ls ++      QI +  +Y +s+++ HRDL   N L +e +  K
    KIAA0175   104 ISQDR-LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLK 152  

                   IsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdgkF
                     DFGL+ + +         + Y+ ++  ++     +   APE ++ + +
    KIAA0175   153 LIDFGLCAKPKGN-------KDYHLQT--CC---GSLAYAAPELIQGKSY 190  

                   .tskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlpk
                     s+ DVWS G+lL+ ++  G  P  +      +   +++++++G++  +
    KIAA0175   191 lGSEADVWSMGILLY-VLMCGFLPFDD-----DNVMALYKKIMRGKYDVP 234  

                   PendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                               ++    l +q  + dP++R ++++l ++  +   
    KIAA0175   235 KWL---------SPSSILLLQQMLQVDPKKRISMKNLlnHPWI    268  

SM00220: domain 1 of 1, from 16 to 268: score 365.8, E = 2.7e-105
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik........erilrE
                      Yel++++G G+F+kV+la ++ tg+ vAiK++++++ +++  ri+ E
    KIAA0175    16    YELHETIGTGGFAKVKLACHILTGEMVAIKIMDkntlgsdlPRIKTE 62   

                   ikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrrg
                   i+ Lk+ +H +I++Ly v e+ +k+++V+Eyc+G  G+Lfd++ ++ r  
    KIAA0175    63 IEALKNlRHQHICQLYHVLETaNKIFMVLEYCPG--GELFDYIISQDR-- 108  

                   lrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvKla
                       lsE+e+r +frQi+sa++Y Hsqg  HRDLKPeN+L+d+ + +Kl+
    KIAA0175   109 ----LSEeETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEyhKLKLI 154  

                   DFGlArql........ttfvGTpeYmAPEvl...gYgkpavDiWSlGcil
                   DFGl+++ +++++ +  t++G++ Y APE++++++Y + ++D+WS G++l
    KIAA0175   155 DFGLCAKPkgnkdyhlQTCCGSLAYAAPELIqgkSYLGSEADVWSMGILL 204  

                   yElltGkpPFp..qldlifkkig..........SpeakdLikklLvkdPe
                   y l++G  PF+++++++++kki++++++ +++ Sp+ + L++++L++dP+
    KIAA0175   205 YVLMCGFLPFDddNVMALYKKIMrgkydvpkwlSPSSILLLQQMLQVDPK 254  

                   kRlta.eaLedeldikaHPff<-*
                   kR++ + +L+       HP++   
    KIAA0175   255 KRISMkNLLN-------HPWI    268  

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