# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha02501s1.fasta.nr -Q ../query/KIAA0178.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0178, 1233 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7805162 sequences Expectation_n fit: rho(ln(x))= 6.7262+/-0.000209; mu= 7.6591+/- 0.012 mean_var=170.5491+/-33.446, 0's: 35 Z-trim: 174 B-trim: 35 in 1/65 Lambda= 0.098209 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74007448|ref|XP_538049.2| PREDICTED: similar to (1295) 7868 1128.3 0 gi|999380|gb|AAB34405.1| mitosis-specific chromoso (1233) 7866 1128.0 0 gi|29336595|sp|O97593|SMC1A_BOVIN Structural maint (1233) 7864 1127.7 0 gi|123220915|emb|CAM23830.1| structural maintenanc (1233) 7862 1127.4 0 gi|149031310|gb|EDL86308.1| structural maintenance (1233) 7857 1126.7 0 gi|29336527|sp|Q9Z1M9.1|SMC1A_RAT RecName: Full=St (1233) 7841 1124.5 0 gi|29336930|sp|Q9CU62.3|SMC1A_MOUSE RecName: Full= (1233) 7831 1123.0 0 gi|126340324|ref|XP_001362224.1| PREDICTED: simila (1233) 7712 1106.2 0 gi|29837126|emb|CAD58850.2| SMC1 protein cohesin s (1234) 7467 1071.5 0 gi|109130919|ref|XP_001091228.1| PREDICTED: SMC1 s (1196) 7453 1069.5 0 gi|28436771|gb|AAH46691.1| Smc1l1 protein [Xenopus (1232) 7449 1068.9 0 gi|29336591|sp|O93308.1|SMC1A_XENLA RecName: Full= (1232) 7426 1065.7 0 gi|49618927|gb|AAT68048.1| chromosome adhesion pro (1233) 7181 1030.9 0 gi|3098266|gb|AAC15582.1| mitosis-specific chromos (1233) 7176 1030.2 0 gi|125852264|ref|XP_688120.2| PREDICTED: similar t (1232) 7133 1024.1 0 gi|119613557|gb|EAW93151.1| SMC1 structural mainte (1099) 7004 1005.8 0 gi|149031309|gb|EDL86307.1| structural maintenance (1001) 6339 911.5 0 gi|148675529|gb|EDL07476.1| structural maintenance (1189) 6325 909.6 0 gi|148675530|gb|EDL07477.1| structural maintenance (1043) 6295 905.3 0 gi|39963673|gb|AAH64368.1| SMC1A protein [Homo sap ( 847) 5362 773.0 0 gi|158257274|dbj|BAF84610.1| unnamed protein produ ( 842) 5345 770.6 0 gi|52545917|emb|CAE45960.2| hypothetical protein [ ( 832) 5178 747.0 1.1e-212 gi|31088222|dbj|BAC76893.1| SMC1 alpha [Oryzias la ( 814) 4788 691.7 4.8e-196 gi|198421707|ref|XP_002129062.1| PREDICTED: simila (1225) 4592 664.1 1.4e-187 gi|126338810|ref|XP_001378464.1| PREDICTED: simila (1240) 4525 654.6 1e-184 gi|73969294|ref|XP_538328.2| PREDICTED: similar to (1235) 4484 648.8 5.8e-183 gi|109094525|ref|XP_001109647.1| PREDICTED: simila (1234) 4474 647.4 1.5e-182 gi|71565160|ref|NP_683515.3| SMC1 structural maint (1235) 4450 644.0 1.6e-181 gi|114686914|ref|XP_515195.2| PREDICTED: SMC1 stru (1235) 4443 643.0 3.2e-181 gi|48427624|emb|CAD43404.2| SMC1beta protein [Homo (1235) 4414 638.9 5.6e-180 gi|57015410|sp|Q8NDV3.2|SMC1B_HUMAN RecName: Full= (1235) 4410 638.3 8.3e-180 gi|114686916|ref|XP_001135642.1| PREDICTED: SMC1 s (1235) 4403 637.3 1.7e-179 gi|118083143|ref|XP_416467.2| PREDICTED: similar t (1243) 4389 635.4 6.6e-179 gi|47228706|emb|CAG07438.1| unnamed protein produc (1277) 4355 630.6 1.9e-177 gi|66506890|ref|XP_395059.2| PREDICTED: similar to (1230) 4344 629.0 5.4e-177 gi|149065716|gb|EDM15589.1| SMC (structural mainte (1247) 4323 626.0 4.3e-176 gi|117938776|gb|AAH03279.1| Smc1a protein [Mus mus ( 679) 4298 622.2 3.3e-175 gi|29336874|sp|Q920F6.1|SMC1B_MOUSE RecName: Full= (1248) 4298 622.5 5e-175 gi|194226969|ref|XP_001488422.2| PREDICTED: struct (1225) 4284 620.5 2e-174 gi|91088785|ref|XP_967679.1| PREDICTED: similar to (1222) 4275 619.2 4.7e-174 gi|193591985|ref|XP_001948129.1| PREDICTED: simila (1239) 4258 616.8 2.5e-173 gi|149436615|ref|XP_001511311.1| PREDICTED: simila (1329) 4254 616.3 3.9e-173 gi|212515372|gb|EEB17527.1| structural maintenance (1228) 4129 598.5 8e-168 gi|108878459|gb|EAT42684.1| structural maintenance (1227) 4025 583.8 2.2e-163 gi|167873449|gb|EDS36832.1| structural maintenance (1227) 4009 581.5 1e-162 gi|116129328|gb|EAA07609.3| AGAP002947-PA [Anophel (1244) 3992 579.1 5.6e-162 gi|125855523|ref|XP_001334257.1| PREDICTED: simila (1235) 3895 565.4 7.7e-158 gi|115730842|ref|XP_786064.2| PREDICTED: hypotheti (1247) 3893 565.1 9.4e-158 gi|149567471|ref|XP_001512488.1| PREDICTED: hypoth (1192) 3835 556.8 2.7e-155 gi|27805177|emb|CAD58847.2| SMC1 beta protein [Tak (1245) 3811 553.5 2.9e-154 >>gi|74007448|ref|XP_538049.2| PREDICTED: similar to Str (1295 aa) initn: 7868 init1: 7868 opt: 7868 Z-score: 6032.0 bits: 1128.3 E(): 0 Smith-Waterman score: 7868; 99.919% identity (99.919% similar) in 1233 aa overlap (1-1233:63-1295) 10 20 30 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAI :::::::::::::::::::::::::::::: gi|740 GLHCGVSRAGYPSSRVYGAAFCTAAGAAAVMGFLKLIEIENFKSYKGRQIIGPFQRFTAI 40 50 60 70 80 90 40 50 60 70 80 90 KIAA01 IGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 IGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEEGAE 100 110 120 130 140 150 100 110 120 130 140 150 KIAA01 DRTFARVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 DRTFARVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 160 170 180 190 200 210 160 170 180 190 200 210 KIAA01 RTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQ 220 230 240 250 260 270 220 230 240 250 260 270 KIAA01 RLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKEL 280 290 300 310 320 330 280 290 300 310 320 330 KIAA01 GKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 GKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK 340 350 360 370 380 390 340 350 360 370 380 390 KIAA01 GDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 GDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLA 400 410 420 430 440 450 400 410 420 430 440 450 KIAA01 QELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQSLE 460 470 480 490 500 510 460 470 480 490 500 510 KIAA01 EQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 EQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRL 520 530 540 550 560 570 520 530 540 550 560 570 KIAA01 YPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 YPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF 580 590 600 610 620 630 580 590 600 610 620 630 KIAA01 LPLDYLEVKPTDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LPLDYLEVKPTDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAF 640 650 660 670 680 690 640 650 660 670 680 690 KIAA01 GGHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 GGHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMK 700 710 720 730 740 750 700 710 720 730 740 750 KIAA01 AKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSKLESELANFGPRIND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 AKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSKLESELANFGPRIND 760 770 780 790 800 810 760 770 780 790 800 810 KIAA01 IKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 IKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEF 820 830 840 850 860 870 820 830 840 850 860 870 KIAA01 ENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 ENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQL 880 890 900 910 920 930 880 890 900 910 920 930 KIAA01 QDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLL 940 950 960 970 980 990 940 950 960 970 980 990 KIAA01 QACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRISSIYAREALIEIDYGDLCEDL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|740 QACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRTSSIYAREALIEIDYGDLCEDL 1000 1010 1020 1030 1040 1050 1000 1010 1020 1030 1040 1050 KIAA01 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARK 1060 1070 1080 1090 1100 1110 1060 1070 1080 1090 1100 1110 KIAA01 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1120 1130 1140 1150 1160 1170 1120 1130 1140 1150 1160 1170 KIAA01 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1180 1190 1200 1210 1220 1230 1180 1190 1200 1210 1220 1230 KIAA01 ANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFDLTKYPDANPNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 ANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFDLTKYPDANPNP 1240 1250 1260 1270 1280 1290 KIAA01 NEQ ::: gi|740 NEQ >>gi|999380|gb|AAB34405.1| mitosis-specific chromosome s (1233 aa) initn: 7866 init1: 7866 opt: 7866 Z-score: 6030.7 bits: 1128.0 E(): 0 Smith-Waterman score: 7866; 99.838% identity (100.000% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE ::::::::::::::::::::::::::::::::::::::::::..:::::::::::::::: gi|999 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGDVAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|999 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|999 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|29336595|sp|O97593|SMC1A_BOVIN Structural maintenan (1233 aa) initn: 7864 init1: 7864 opt: 7864 Z-score: 6029.2 bits: 1127.7 E(): 0 Smith-Waterman score: 7864; 99.838% identity (99.919% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI :::::::: :.::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|293 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|123220915|emb|CAM23830.1| structural maintenance of (1233 aa) initn: 7862 init1: 7862 opt: 7862 Z-score: 6027.6 bits: 1127.4 E(): 0 Smith-Waterman score: 7862; 99.838% identity (99.919% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI .::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|123 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|149031310|gb|EDL86308.1| structural maintenance of (1233 aa) initn: 7857 init1: 7857 opt: 7857 Z-score: 6023.8 bits: 1126.7 E(): 0 Smith-Waterman score: 7857; 99.757% identity (99.919% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|149 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI .::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|149 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|29336527|sp|Q9Z1M9.1|SMC1A_RAT RecName: Full=Struct (1233 aa) initn: 7841 init1: 7841 opt: 7841 Z-score: 6011.6 bits: 1124.5 E(): 0 Smith-Waterman score: 7841; 99.594% identity (99.757% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|293 DTQFNYHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|293 AKENTSHKIKKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|293 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI .::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|293 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|29336930|sp|Q9CU62.3|SMC1A_MOUSE RecName: Full=Stru (1233 aa) initn: 7831 init1: 7831 opt: 7831 Z-score: 6003.9 bits: 1123.0 E(): 0 Smith-Waterman score: 7831; 99.432% identity (99.838% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|293 AKENTSHKIKKLEAAKKSLQHAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|293 AKARRWDEKAVDKLKEKKGRLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::.:::::::::::::::::::::.:::::::::::::::: gi|293 ANKEMTHLQKEVTAIETKLEQERSDRHNLLQACKMQDIKLPLSEGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI .::::::: :::::::::::::::::::::::::::::::::::::::::::.::::::: gi|293 ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNERQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|293 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|293 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|126340324|ref|XP_001362224.1| PREDICTED: similar to (1233 aa) initn: 7712 init1: 7712 opt: 7712 Z-score: 5912.8 bits: 1106.2 E(): 0 Smith-Waterman score: 7712; 97.729% identity (99.676% similar) in 1233 aa overlap (1-1233:1-1233) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|126 MGFLKLIEIENFKSYKGKQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::: :::::::...:::::::.::::::::::::::::: :::.: gi|126 LRDLIHGAPVGKPAANRAAVSMVYSEDSGEDRTFARIIVGGSSEYKINNKVVQLLEYSQE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|126 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEMEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK ::.::::::.:.::::::::.::::::::::::::::::::::::::::::::::::::: gi|126 ELTSKNKEIDKEKKRMDKVEEELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS ::::::::::::::::::::::::.:::::::::::::::.::::::::::.:::::::: gi|126 AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMVSVEKARQEFEDRMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::..::.:::::::::::: gi|126 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVKLAKQRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|126 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|126 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLAKGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI .: ::::: :.::::::::::::.::::::::::::::::::::::::::.::::::::: gi|126 ESGSGSQRTSNIYAREALIEIDYSDLCEDLKDAQAEEEIKQEMNTLQQKLTEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|126 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKHAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL 1150 1160 1170 1180 1190 1200 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::::::::: gi|126 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|29837126|emb|CAD58850.2| SMC1 protein cohesin subun (1234 aa) initn: 5988 init1: 5988 opt: 7467 Z-score: 5725.2 bits: 1071.5 E(): 0 Smith-Waterman score: 7467; 94.489% identity (98.622% similar) in 1234 aa overlap (1-1233:1-1234) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT ::.:::::::::::::::::::::.:::::: :::::::::::::::::::::::::::. gi|298 MGYLKLIEIENFKSYKGRQIIGPFRRFTAIIVPNGSGKSNLMDAISFVLGEKTSNLRVKA 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE ::::::::::::::.::: :::::... . .:::::.:::.::::::::.:::: ::::: gi|298 LRDLIHGAPVGKPASNRACVSMVYAQDCGTERTFARLIVGSSSEYKINNRVVQLSEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|298 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEAEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK ::. ::.::.:::::::.::::::..:::::::::::::::::::::::::::::::::: gi|298 ELGLKNREIDKDKKRMDRVEDELKDRKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::.:::::.:::.:.::::::.:::::.::::::::: .:::::::::::::::::: gi|298 AKENTAHKIKKVEAARKALQNAQKQYKKRKADMDELEKEMGAVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|298 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQERLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV ::::::::::::::::::::::.::::::::::.:::::: ::: :::::::::.::::: gi|298 IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKRLEGELTAEVESAKRRIDEINQELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK ::::::::::::::::::::::::.:::::::::::::::.::::::::::::::::::: gi|298 MEQLGDARIDRQESSRQQRKAEIMDSIKRLYPGSVYGRLIELCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :.::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 NLDAFIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 QTKTRHLALNMQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|298 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDYEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::: ::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|298 TVKKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMDEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::. :: gi|298 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSGGGE 910 920 930 940 950 960 970 980 990 1000 1010 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQ-AEEEIKQEMNTLQQKLNEQQSVLQR ..:::::: ::.:::::::::::.:: :.:: : ::::::::::::::::::.::.::: gi|298 EGVSGSQRSSSLYAREALIEIDYSDLPEELKAAAPAEEEIKQEMNTLQQKLNERQSILQR 970 980 990 1000 1010 1020 1020 1030 1040 1050 1060 1070 KIAA01 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVAT :.::::::.::::::::::::::..::::::.::::::::::.::::::::::::::::: gi|298 ISAPNMKAVEKLESVRDKFQETSEDFEAARKEAKKAKQAFEQVKKERFDRFNACFESVAT 1030 1040 1050 1060 1070 1080 1080 1090 1100 1110 1120 1130 KIAA01 NIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 NIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA 1090 1100 1110 1120 1130 1140 1140 1150 1160 1170 1180 1190 KIAA01 LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAES :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|298 LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTQNFQAIVISLKEEFYTKAES 1150 1160 1170 1180 1190 1200 1200 1210 1220 1230 KIAA01 LIGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ :::::::::::::::::::::::::::::::::: gi|298 LIGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ 1210 1220 1230 >>gi|109130919|ref|XP_001091228.1| PREDICTED: SMC1 struc (1196 aa) initn: 7453 init1: 7453 opt: 7453 Z-score: 5714.6 bits: 1069.5 E(): 0 Smith-Waterman score: 7558; 96.999% identity (96.999% similar) in 1233 aa overlap (1-1233:1-1196) 10 20 30 40 50 60 KIAA01 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT 10 20 30 40 50 60 70 80 90 100 110 120 KIAA01 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE 70 80 90 100 110 120 130 140 150 160 170 180 KIAA01 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE 130 140 150 160 170 180 190 200 210 220 230 240 KIAA01 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK 190 200 210 220 230 240 250 260 270 280 290 300 KIAA01 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK 250 260 270 280 290 300 310 320 330 340 350 360 KIAA01 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS 310 320 330 340 350 360 370 380 390 400 410 420 KIAA01 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK 370 380 390 400 410 420 430 440 450 460 470 480 KIAA01 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV 430 440 450 460 470 480 490 500 510 520 530 540 KIAA01 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK 490 500 510 520 530 540 550 560 570 580 590 600 KIAA01 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY 550 560 570 580 590 600 610 620 630 640 650 660 KIAA01 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK 610 620 630 640 650 660 670 680 690 700 710 720 KIAA01 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE 670 680 690 700 710 720 730 740 750 760 770 780 KIAA01 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF 730 740 750 760 770 780 790 800 810 820 830 840 KIAA01 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ 790 800 810 820 830 840 850 860 870 880 890 900 KIAA01 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG 850 860 870 880 890 900 910 920 930 940 950 960 KIAA01 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE 910 920 930 940 950 960 970 980 990 1000 1010 1020 KIAA01 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 KIAA01 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 KIAA01 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 KIAA01 LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL ::::::::::::::::::::::::::::: gi|109 LFAIHSYKPAPFFVLDEIDAALDNTNIGK------------------------------- 1150 1160 1210 1220 1230 KIAA01 IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ ::::::::::::::::::::::::::: gi|109 ------QGDCVISKVLTFDLTKYPDANPNPNEQ 1170 1180 1190 1233 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 02:37:06 2009 done: Wed Mar 4 02:40:59 2009 Total Scan time: 1822.650 Total Display time: 1.220 Function used was FASTA [version 34.26.5 April 26, 2007]