hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19493217/chunk_1/iprscan-20080501-19493217.nocrc
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Query sequence: KIAA0189
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00234                                                 251.1    9.1e-71   1
SM00324                                                 201.6    7.2e-56   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00324    1/1     692   883 ..     1   193 []   201.6  7.2e-56
SM00234    1/1     927  1129 ..     1   248 []   251.1  9.1e-71

Alignments of top-scoring domains:
SM00324: domain 1 of 1, from 692 to 883: score 201.6, E = 7.2e-56
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      +p+P+ ++++++yl++++ld++GI+R+sG+ksr++ Lr++ ++++d+
    KIAA0189   692    QPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDn 738  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +             ++e ++++dvA+lLK+y+R+LPeP++t++l   f++
    KIAA0189   739 V-------------CYEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQ 775  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                   +++l                +++ l a + +  lLP++nr++L+ Ll +L
    KIAA0189   776 IYQL--------------LPKDQWLAAAQAATLLLPDENREVLQTLLyFL 811  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.....................
                   + +a  +e+N Mta NLA++++P++++ + +++++++++ +++++  +++
    KIAA0189   812 SDIA-SAEENQMTAGNLAVCLAPSIFHLNvskkdspsprikskrsligrp 860  

                   ....ltdikhqnkvvetlienad<-*
                   ++++l+d+   ++ + ++i ++    
    KIAA0189   861 gprdLSDNMAATQGLSHMISDCK    883  

SM00234: domain 1 of 1, from 927 to 1129: score 251.1, E = 9.1e-71
                   *->evaeeaanellklaassekgWvlspetgeiengdevlsiledgqnpk
                       ++ee+ + ll++aa+++kgW+++p  g++++++ +++ +       
    KIAA0189   927    LYMEENIQDLLRDAAERFKGWMSVP--GPQHTELACRKAP------- 964  

                   qglkvsgealravgvvpmvcaedlvaellddgey.rkeWdknfagivska
                        +g++lr++++  +v+a   +a +l++ +++r++Wd+++     +a
    KIAA0189   965 -----DGHPLRLWKASTEVAA--PPAVVLHRVLReRALWDEDLL----RA 1003 

                   evvevissgtGgnrngviyhyvaksvapgpvsPtRDfvfvRywreddeHR
                   +v+e++++g       ++yhyv++s+a  p+++ RDfv++R+wr d    
    KIAA0189  1004 QVLEALMPG------VELYHYVTDSMA--PHPC-RDFVVLRMWRSD---- 1040 

                   alvdgsyvivsvSvthetspptGpssgvvRaellpsgllieplgngpekd
                    l++g++++vs+S+++e+++p+    ++vRa +l s++l+ep+g g+   
    KIAA0189  1041 -LPRGGCLLVSQSLDPEQPVPE----SGVRALMLTSQYLMEPCGLGR--- 1082 

                   dvkskvtwvsqaDlkGwlPvvhwllrsliksglaefaktRDsvatlqksc
                      s++t++++aDl+G++P  +w+++++++ +++e+ak+RDs+ tlq+ +
    KIAA0189  1083 ---SRLTHICRADLRGRSP--DWYNKVFGHLCAMEVAKIRDSFPTLQAAG 1127 

                   ek<-*
                    +   
    KIAA0189  1128 PE    1129 

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