# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/ha02370.fasta.huge -Q ../query/KIAA0192.ptfa ./tmplib.23147 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0192, 2124 aa vs ./tmplib.23147 library 1985381 residues in 2037 sequences Expectation_n fit: rho(ln(x))= 10.7426+/-0.0107; mu= -7.5134+/- 0.723 mean_var=513.1180+/-124.871, 0's: 0 Z-trim: 16 B-trim: 0 in 0/40 Lambda= 0.056619 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 43, opt: 31, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2037) KIAA1635 ( 1435 res) fh23184(revised) (1435) 2175 194.3 2e-49 KIAA1819 ( 1173 res) hh00456 (1173) 566 62.7 6.6e-10 KIAA1818 ( 1157 res) hg00622 (1157) 378 47.4 2.8e-05 KIAA1048 ( 897 res) hh02560 ( 897) 316 42.2 0.00079 KIAA1820 ( 1644 res) hh01321 (1644) 283 39.8 0.0074 KIAA2018 ( 1685 res) ha04734 (1685) 282 39.7 0.008 >>KIAA1635 ( 1435 res) fh23184(revised) (1435 aa) initn: 5043 init1: 1845 opt: 2175 Z-score: 979.0 bits: 194.3 E(): 2e-49 Smith-Waterman score: 5267; 58.439% identity (77.452% similar) in 1499 aa overlap (685-2122:1-1430) 660 670 680 690 700 710 KIAA01 KEVKPPPKEKIEGTLGVLYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDA :::: .:: ::::::: ..:.::::.::.: KIAA16 FPIPLDESSSHECNQRTILLYGVGKERDEA 10 20 30 720 730 740 750 760 770 KIAA01 RHAIKKITKDILKVLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRNRPEAFPTAE :: .:::::::::.::.:.:.:: :..::: :.:. :.::: : KIAA16 RHQLKKITKDILKILNKKSTTETGV----------------GDEGQKARKNKQETFPTLE 40 50 60 70 780 790 800 810 820 830 KIAA01 DIFAKFQHLSHYDQHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQFIFDLMEYSLSIS .:.:.: ::..::::::.:.: :::::::::: : ::::::..:.:.:::::: .:.:. KIAA16 TVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGTSYHLPLAHHIQLIFDLMEPALNIN 80 90 100 110 120 130 840 850 860 870 880 890 KIAA01 GLIDFAIQLLNELSVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHACLILNQDQMAQV :::::::::::::::::::::::::.:.:::::.::.:::::::.::.::::: :: ::: KIAA16 GLIDFAIQLLNELSVVEAELLLKSSSLAGSYTTGLCVCIVAVLRRYHSCLILNPDQTAQV 140 150 160 170 180 190 900 910 920 930 940 950 KIAA01 FEGLCGVVKHGMNRSDGSSAERCILAYLYDLYTSCSHLKNKFGELFSDFCSKVKNTIYCN :::::::::: .: :. :: ::::::::::::.:::::..:::.:::. :::::.::: : KIAA16 FEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNN 200 210 220 230 240 250 960 970 980 990 1000 1010 KIAA01 VEPSESNMRWAPEFMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHD : :..::.:: :.::.: .:::.:....:. ::: ::.: :::::::::.::.::.::.: KIAA16 VMPANSNLRWDPDFMMDFIENPSARSINYSMLGKILSDNAANRYSFVCNTLMNVCMGHQD 260 270 280 290 300 310 1020 1030 1040 1050 1060 1070 KIAA01 PDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDS :.:::: . .:::. : ::.::::::::::::::. . ::::.::.::::::::::: KIAA16 AGRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNH-VWGFNDVLCTVDVSDLSFHDS 320 330 340 350 360 370 1080 1090 1100 1110 1120 1130 KIAA01 LATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNP ::::.::::::::. :::... .:.:::: :::.. :.:::::.:::.:::::..:: KIAA16 LATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQ--A 380 390 400 410 420 430 1140 1150 1160 1170 1180 KIAA01 C---QSDGNKPTVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAE--------LK : :. : :: :::::::::::::..: : :::::::::...::::. :: KIAA16 CFLPQATG-KPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDAKIGNNSVSSLK 440 450 460 470 480 490 1190 1200 1210 1220 1230 1240 KIAA01 GSGFTVTGGTEELPEEEGGGGSGGRRQGGRNISVETASLDVYAKYVLRSICQQEWVGERC .. ::. : . .. .: . .. :..::.:::.: ::.::::.:::::::::.: KIAA16 NDDFTMRGLRCDGNADDIWTASQNPKSCGKSISIETANLREYARYVLRTICQQEWVGEHC 500 510 520 530 540 550 1250 1260 1270 1280 1290 1300 KIAA01 LKS---LCEDSNDLQDPVLSSAQAQRLMQLICYPHRLLDNEDGENPQRQRIKRILQNLDQ :: :: :.. . :::::. :::.:.::::::: . . .:.: :::.::::::::.: KIAA16 LKEPERLCTDKELILDPVLSNMQAQKLLQLICYPHGIKECTEGDNLQRQHIKRILQNLEQ 560 570 580 590 600 610 1310 1320 1330 1340 1350 KIAA01 WTMRQSSLELQLMIKQT---PNN----EMNSLLENIAKATIEVFQRSAETGSSSGSTAS- ::.::: ::::::::: :.. :::.::.:::::::::::.::. ..::.: : KIAA16 WTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSADLNNSSNSGMSL 620 630 640 650 660 670 1360 1370 1380 1390 1400 KIAA01 ---NMPSSSKT--------KPVLSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKG : .:. : : ::: :: ::::::::::.:::::::.:::::::::::: KIAA16 FNPNSIGSADTSSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKG 680 690 700 710 720 730 1410 1420 1430 1440 1450 1460 KIAA01 QHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVHQIVNNW :::::::.::::::::::::::::::::::::::::::::::::::::: .::.::..:: KIAA16 QHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNW 740 750 760 770 780 790 1470 1480 1490 1500 1510 1520 KIAA01 RDDQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAMLLLEIIISGTVDMQS :...: :: : .:.:::::.:::::::::::::::::: ::.::.:::.:: ::::::.. KIAA16 REERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSTQWTTDWALLLLQIITSGTVDMHT 800 810 820 830 840 850 1530 1540 1550 1560 1570 1580 KIAA01 NNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLAKKLQKELGERQSDSLEK ::::::::::::.::::::::.:.:. : :. ::::::::::.:::.::::...:.:..: KIAA16 NNELFTTVLDMLGVLINGTLASDLSNASPGGSEENKRAYMNLVKKLKKELGDKRSESIDK 860 870 880 890 900 910 1590 1600 1610 1620 1630 1640 KIAA01 VRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFEGL ::::::::::: :::::::.::::::::::::::::: ::.:::::::::.:::::::: KIAA16 VRQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQ 920 930 940 950 960 970 1650 1660 1670 1680 1690 KIAA01 KPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYYLEPLPLPPEDEE--PP : :::::.::::::::::: . :::..::::::: :.::.:::.:::::::.:: : KIAA16 KNPAPLSWAWFGTVRVDRRVIKYEEQHHLLLYHTHPMPKPRSYYLQPLPLPPEEEEEEPT 980 990 1000 1010 1020 1030 1700 1710 1720 1730 1740 1750 KIAA01 APTLLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKR-SQPATKTEDYGMGP-GRSG .:. :::.:. : .:. . .:.:.:: :::.:: .. ......: .. : KIAA16 SPVSQEPERKSAE--LSDQ---GKTTTDEEKK--TKGRKRKTKSSSRVDEYPQSNIYRVP 1040 1050 1060 1070 1080 1760 1770 1780 1790 1800 1810 KIAA01 PYGVTVPPDLLHHPNPGSITHLNY--RQGSIGLYTQNQPLPAGGPRVDPYRPVRLPMQKL : . ...:::. ... : . . :.. ::: : :: :.:: .: . KIAA16 PNYSPISSQMMHHPQ-STLWGYNLVGQPQQPGFFLQNQSLTPGGSRLDPAGSF-VPTN-- 1090 1100 1110 1120 1130 1820 1830 1840 1850 1860 KIAA01 PTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQQQPAVP-----QGQRLRQQLQQ---SQG :. . ..: .:.: ..: : .. . .:: . : ::: .: : .:: KIAA16 -TKQALSNMLQRR-SGAM-MQPPSLHAITSQQQLIQMKLLQQQQQQRLLRQAQTRPFQQG 1140 1150 1160 1170 1180 1190 1870 1880 1890 1900 1910 KIAA01 MLGQSSV---HQMTPSSSY----GLQTSQ----GYTPYVSHVGLQQHTGP-AGTMV-PPS . :.... : :: . ::: .: ::: : ... ::: . ::..: :: KIAA16 QPGDQAALFAAQARPSPQLPQYPGLQQAQTMPQGYTMYGTQMPLQQTSQQQAGSVVLSPS 1200 1210 1220 1230 1240 1250 1920 1930 1940 1950 1960 1970 KIAA01 YSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQTPMI :.:. : ..: .::.:.. :..::.:::::.::: : . ::..::..::.:::.:.. KIAA16 YNSRAYPAAH--SNPVLMERLRQIQQQPSGYVQQQASPYLQPLTGSQRLNHQALQQSPLV 1260 1270 1280 1290 1300 1310 1980 1990 2000 2010 2020 2030 KIAA01 STMTPMSAQGVQAGVRST-AILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQ . :..: . :. :: :. .. .: : .:::: . KIAA16 GG-------GIDAVLTSAHPNLPSVPLPQDPMRPRQPQ--------------VRQQQ--R 1320 1330 1340 1350 2040 2050 2060 2070 2080 2090 KIAA01 ILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQ .:..:: :: : :: : ::..:.:.: : .: :: :: : :::::::: KIAA16 LLQMQQPQQPQPQQPPQPQQSSQSQSQTLGLQAMQ-------PQ---QPLFPRQGLQQTQ 1360 1370 1380 1390 1400 2100 2110 2120 KIAA01 QQQQTAALVRQLQQQLSNTQPQPSTNIFGRY :::::::::::::.:::..::: ... .: KIAA16 QQQQTAALVRQLQKQLSSNQPQQGVTPYGHPSHF 1410 1420 1430 >>KIAA1819 ( 1173 res) hh00456 (1173 aa) initn: 1190 init1: 408 opt: 566 Z-score: 269.7 bits: 62.7 E(): 6.6e-10 Smith-Waterman score: 578; 32.700% identity (53.797% similar) in 474 aa overlap (1691-2119:309-747) 1670 1680 1690 1700 1710 1720 KIAA01 VARGEEQQRLLLYHTHLRPRPRAYYLEPLPLPPEDEEPPAPTLLEPEKKAPEPPKTDKPG .: . . :. :..:: . :. KIAA18 NMGLKEVKKEPGETLSCSKHMDGQMTQENIFPNRYGDDPGEQLMDPELQELFNELTNI-- 280 290 300 310 320 330 1730 1740 1750 1760 1770 KIAA01 AAPPSTE-ERKKKSTKGKKRSQPATKTEDYGMGPGRSGPYGVTVPPDLL---HHPNPGSI ..:: .. : .. . :...: . : :. :: : ..: . . . .:: KIAA18 SVPPMSDLELENMINATIKQDDPFNI--DLGQQSQRSTPRP-SLPMEKIVIKSEYSPG-- 340 350 360 370 380 390 1780 1790 1800 1810 1820 1830 KIAA01 THLNYRQGSIGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLE :: : : .: :..:: . . . .:. : . : : .:. KIAA18 ----LTQGPSG-SPQLRP-PSAGPAFSMANSALSTSSPIPSVPQSQA-QPQTGSGASRAL 400 410 420 430 440 1840 1850 1860 1870 KIAA01 PSSYKTSVYRQ-QQPAVPQGQ--RLRQQLQQSQ---------------GMLGQSSVHQMT :: ..: .: .: :. . : :..:. :: : : .:: .. KIAA18 PSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKI---- 450 460 470 480 490 500 1880 1890 1900 1910 1920 1930 KIAA01 PSSSYGLQTSQGYTPYVSHV-GLQQHTGPAGTMVPPSYSSQPY-QSTHPSTNPTLVDPTR :: :.: :: ..: : . :. .: . .:. :.. : :. : .: KIAA18 PSPSFGQQT---FSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGH-------LDVL- 510 520 530 540 1940 1950 1960 1970 1980 KIAA01 HLQQRPS----GYVHQQAPTYGHGLTSTQRFSH----QTLQQTPMISTMTPMSAQGVQAG .::.:. ..... :.. .:. . : :. :: : . . .:. . KIAA18 -MQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSV-----LPSQNKPSL 550 560 570 580 590 600 1990 2000 2010 2020 2030 2040 KIAA01 VRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQ----ILRQQQQQQQQ .. : .:::::::::::::::::::::::::: : ::::: : :::::::: KIAA18 LHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQ 610 620 630 640 650 660 2050 2060 2070 2080 2090 2100 KIAA01 QQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQ ::::::::::::::::::. ..: :. : :: .: .:.. : : .:.: :.. : KIAA18 QQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQ 670 680 690 700 710 720 2110 2120 KIAA01 LQQQL---------SNTQPQPSTNIFGRY ..:: .:: :.:: : KIAA18 VSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIME 730 740 750 760 770 780 >>KIAA1818 ( 1157 res) hg00622 (1157 aa) initn: 1396 init1: 268 opt: 378 Z-score: 186.7 bits: 47.4 E(): 2.8e-05 Smith-Waterman score: 408; 27.402% identity (47.865% similar) in 562 aa overlap (1579-2122:374-874) 1550 1560 1570 1580 1590 1600 KIAA01 SQGSMEENKRAYMNLAKKLQKELGERQSDSLEKVRQLLPLPKQTRDVITCEPQGSLIDTK :. :.::: :: . .:. . : KIAA18 FAKPLPTFAKPTAEPGQDNPEWLISEDWALLQAVKQLLELPLNL--TIVSPAHTPNWDLV 350 360 370 380 390 400 1610 1620 1630 1640 1650 1660 KIAA01 GNKIAGFDSIFKKEGLQVSTKQK--ISPWDLFEGL-KPSAPLSWGWFGTVRVDRRVARGE .. . . . :... . : .. . : : . :: : . :: :... :. : KIAA18 SDVVNSCSRIYRS-SKQCRNRYENVIIPRE--EGKSKNNRPL--------RTSQIYAQDE 410 420 430 440 450 1670 1680 1690 1700 1710 KIAA01 EQQRLLLYHTH-----LRPRPRAYYLEPL-PLPPEDEEPPAPTLLEP---EKKAPEPPKT . . :: .: . :. ..:: . : ...: ..: . : :: KIAA18 NATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHASVLAESGINYDKPLPPIQ 460 470 480 490 500 510 1720 1730 1740 1750 1760 1770 KIAA01 DKPGAAPPSTEERKKKSTKGKKRSQPATKTEDYGMGPGRSGPYGVTVPPDLLHHPNPGSI : ..:.: . . .: .:::. : . : :: . : : KIAA18 VASLRAERIAKEKKALADQ-QKAQQPAVAQPP----PPQPQP-----PPPPQQPPPPLPQ 520 530 540 550 560 1780 1790 1800 1810 1820 1830 KIAA01 THLNYRQGSIGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLE . : : :: : :...: .::. : . :. : : .. KIAA18 PQAAGSQPPAG-PPAVQPQPQPQPQTQP-QPVQAPAKAQPA---------ITTGGSAAVL 570 580 590 600 1840 1850 1860 1870 1880 1890 KIAA01 PSSYKTSVYRQQQPA-VPQGQRLRQQLQQSQGMLGQSSVHQM-TPSSSYGLQTSQGYTPY .. :::: ..:. . .:. . . . . :: ... .: . .: : : .: KIAA18 AGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAP- 610 620 630 640 650 660 1900 1910 1920 1930 1940 1950 KIAA01 VSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYG ..: :: : :: ..: .: : ::. . : : .: . KIAA18 -AQV---VHTQP-----PPRAVGSPATAT-----PDLVSMATTQGVRAVTSVTASA-VVT 670 680 690 700 710 1960 1970 1980 1990 2000 2010 KIAA01 HGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQ .:: .: ... . :..: : .. : .: .::::::::::::::::: KIAA18 TNLTPVQTPARSLV---PQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQ 720 730 740 750 760 770 2020 2030 2040 2050 2060 2070 KIAA01 QQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQH--QQQQQQQAA ::::::::: ::: : : : : : :. : . . .: ..:.:. KIAA18 QQQQQQQQQ-----QQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQM 780 790 800 810 820 2080 2090 2100 2110 2120 KIAA01 PPQPQPQSQPQFQRQGLQQTQQQQ-QTAALVRQLQQQLSN-TQPQPSTNIFGRY :::: : :: : : : : : ::. .: . ::.. : :.:.. . : KIAA18 PPQPPP---PQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANLQV 830 840 850 860 870 880 KIAA18 ARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVA 890 900 910 920 930 940 >>KIAA1048 ( 897 res) hh02560 (897 aa) initn: 564 init1: 221 opt: 316 Z-score: 160.6 bits: 42.2 E(): 0.00079 Smith-Waterman score: 341; 29.058% identity (47.382% similar) in 382 aa overlap (1765-2122:330-665) 1740 1750 1760 1770 1780 1790 KIAA01 KGKKRSQPATKTEDYGMGPGRSGPYGVTVPPDLLHHPNPGSITHLNYR--QGSIGL-YTQ :: ..:. ........ . . .: KIAA10 QVAICDGNFTIPDNSRYSQDMHCLIRYMLEPDPDKRPDIYQVSYFSFKLLKKECPIPNVQ 300 310 320 330 340 350 1800 1810 1820 1830 1840 1850 KIAA01 NQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQQQPA :.:.:: : .: . . .: . .::: .::. .:.: KIAA10 NSPIPAKLP--EPVKASEAAAKKTQPKARLTDPIPTT------------ETSIAPRQRPK 360 370 380 390 400 1860 1870 1880 1890 1900 1910 KIAA01 VPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTMV . : : . :.: . . .:: . .: . .. :: . .. KIAA10 AGQ-------TQPNPGILPIQPA--LTPRKRATVQPPPQAAGSSNQPGLLASVPQPKPQA 410 420 430 440 450 1920 1930 1940 1950 1960 KIAA01 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQR--FSHQTLQ ::: :. .:.. :: : :: :: . : :. ... . :. : .: : KIAA10 PPSQPLPQTQAKQPQAPPT---P----QQTPSTQA-QGLPAQAQATPQHQQQLFLKQQQQ 460 470 480 490 500 1970 1980 1990 2000 2010 2020 KIAA01 QTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHI--- : . : :: ::. :::: : :: : . :: :. . KIAA10 Q------QQPPPAQQQPAGTF--------YQQQQAQTQQFQAVHPATQQPAIAQFPVVSQ 510 520 530 540 550 2030 2040 2050 2060 2070 KIAA01 --RQQQQQQILRQQQQQQQQQQQQQQ-----QQQQQQQQQ---QQQH-----QQQQQQQA ::: .: . :::::::::::::: .::: . :: ::. :: : : : KIAA10 GGSQQQLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPA 560 570 580 590 600 610 2080 2090 2100 2110 2120 KIAA01 APPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQ-PSTNIFGRY : ::: : ..: .: :: . : : : :. : : :. :.:. : KIAA10 AAPQPAPAQEPAIQAPVRQQPKVQTTPPPAV-QGQKVGSLTPPSSPKTQRAGHRRILSDV 620 630 640 650 660 670 KIAA10 THSAVFGVPASKSTQLLQAAAAEASLNKSKSATTTPSGSPRTSQQNVYNPSEGSTWNPFD 680 690 700 710 720 730 >>KIAA1820 ( 1644 res) hh01321 (1644 aa) initn: 469 init1: 146 opt: 283 Z-score: 143.1 bits: 39.8 E(): 0.0074 Smith-Waterman score: 288; 23.881% identity (52.736% similar) in 402 aa overlap (1719-2101:1-386) 1690 1700 1710 1720 1730 1740 KIAA01 LPLPPEDEEPPAPTLLEPEKKAPEPPKTDKPGAAPPSTEER---KKKSTKGKKRSQPATK :. . : .:: . :. . .. :: ... KIAA18 PARVMQSFRERCGFHGKQQNYQQTSQETSR 10 20 30 1750 1760 1770 1780 1790 1800 KIAA01 TEDYGMGPGRSG---PYGVTVPPDLLHHPNPGSITHLNYRQGSIGLYTQNQPLPAGGPRV :.: . :...: . : ..:.: . .: .:. : . . :.. . KIAA18 LENYRQ-PSQAGLSCDRQRLLAKDY-YNPQP----YPSY-EGGAGTPSGT----AAAVAA 40 50 60 70 1810 1820 1830 1840 1850 KIAA01 DPY-RPVR-LPMQK-LPTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQQQPAVPQGQRLR : : : . :: :. : ::..:: . : . . ... :: :: : : KIAA18 DKYHRGSKALPTQQGLQGRPAFPGYGVQDSSPYPGRYAGEESLQAWGAPQPPPPQPQPLP 80 90 100 110 120 130 1860 1870 1880 1890 1900 1910 KIAA01 QQLQQ-SQGMLGQSSVHQMTPSSSYGLQTSQGYTPYVSH-VGLQQHTGPAGTMVPPSYSS . . ..... ...: :: .:. : .: .:. .: . .:: : .. :. . KIAA18 AGVAKYDENLMKKTAV---PPSRQYAEQGAQ--VPFRTHSLHVQQPPPPQQPLAYPKLQR 140 150 160 170 180 190 1920 1930 1940 1950 1960 1970 KIAA01 QPYQS--THPSTNPTLVDPTRHLQQRPSGYVHQQA-PTYGHGLTSTQRFSHQTLQ--QTP : :. . : : . .: :. :.. ..... :.: : . . : : . : KIAA18 QKLQNDIASPLPFPQGTHFPQHSQSFPTSSTYSSSVQGGGQGAHSYKSCTAPTAQPHDRP 200 210 220 230 240 250 1980 1990 2000 2010 2020 2030 KIAA01 MISTMTPMSAQGVQA-GVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQ . .. . .: :: . ... : .:::::::::::::: :.... :. : .. . KIAA18 LTASSSLAPGQRVQNLHAYQSGRLSYDQQQQQQQQQQQQQQALQSRHHAQETLHYQNLAK 260 270 280 290 300 310 2040 2050 2060 2070 2080 KIAA01 QQILRQQQQQQQQQQQQQQQQQQQQQ--QQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGL : :: : : . . .: : . ...:. .. .: . : . . ... KIAA18 YQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENF 320 330 340 350 360 370 2090 2100 2110 2120 KIAA01 QQTQQQQQTAALVRQLQQQLSNTQPQPSTNIFGRY .:: .:.:. KIAA18 PYSQQPLSTGAFPAGITDHSHFMPLLNPSPTDATSSVDTQAGNCKPLQKDKLPENLLSDL 380 390 400 410 420 430 >>KIAA2018 ( 1685 res) ha04734 (1685 aa) initn: 773 init1: 238 opt: 282 Z-score: 142.6 bits: 39.7 E(): 0.008 Smith-Waterman score: 302; 25.326% identity (52.219% similar) in 383 aa overlap (1753-2115:622-981) 1730 1740 1750 1760 1770 1780 KIAA01 PPSTEERKKKSTKGKKRSQPATKTEDYGMGPGRSGPYGVTVPPDLLHHPNPGSITHLNYR : .:: . . :. .. . ::: : KIAA20 VGLQADIREVASKPSEASLLEGDPPFKSQIPKESGTGQAEATPNEFN--SQGSIEATMER 600 610 620 630 640 1790 1800 1810 1820 1830 KIAA01 -----QGSIGLYTQNQPLP---AGGPRVDPYRPVRLPMQKLPTRP--TYPGVLPTT-MTG . :.:. :.: : . : . : :. ..: . :. ::. .: KIAA20 PLEKPSCSLGIKTSNASLQDSTSQPPSITSLSVNNLIHQSSISHPLASCAGLSPTSEQTT 650 660 670 680 690 700 1840 1850 1860 1870 1880 KIAA01 VMGLEPSSYKTSVYRQQQPAVPQ--GQRLRQQLQQSQGMLGQSSVHQ--MTPSSSYGLQT : . . ..: : .: :. :. . ..::. . . .:.... . :: .. KIAA20 VPATVNLTVSSSSYGSQPPG-PSLMTEYSQEQLNTMTSTIPNSQIQEPLLKPSHESRKDS 710 720 730 740 750 760 1890 1900 1910 1920 1930 1940 KIAA01 SQGYTP---YVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSG .. . .: . :.: :: : :. .: :.: . : :. . KIAA20 AKRAVQDDLLLSSAKRQKHCQPA----PLRLESMSLMSRTPDT---ISDQTQMM------ 770 780 790 800 810 1950 1960 1970 1980 1990 2000 KIAA01 YVHQQAPTYGHGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQ : : :. ..... .. .: .. . : : . : ..:.: . .: . . KIAA20 -VSQIPPNSSNSVVPVSNPAHGD-----GLTRLFPPSNNFVTPALRQTEVQCGSQPSVAE 820 830 840 850 860 2010 2020 2030 2040 2050 2060 KIAA01 QQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQ ::: : .:. : ::. . . .... : .:::::::::::::::: : ....: KIAA20 QQQTQASQHLQALQQHVPAQGVSHLHSNH-LYIKQQQQQQQQQQQQQQQQAGQLRERHHL 870 880 890 900 910 920 2070 2080 2090 2100 2110 2120 KIAA01 QQQQQQAAPPQPQPQSQPQ--FQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPSTNIFG :.:... . . .:::. :.. ::: :.:. ::. : . . ::. KIAA20 YQMQHHVPHAESSVHSQPHNVHQQRTLQQEVQMQKKRNLVQGTQTSQLSLQPKHHGTDQS 930 940 950 960 970 980 KIAA01 RY KIAA20 RSKTGQPHPHHQQMQQQMQQHFGSSQTEKSCENPSTSRNHHNHPQNHLNQDIMHQQQDVG 990 1000 1010 1020 1030 1040 2124 residues in 1 query sequences 1985381 residues in 2037 library sequences Scomplib [34.26] start: Thu Dec 18 15:11:03 2008 done: Thu Dec 18 15:11:05 2008 Total Scan time: 1.030 Total Display time: 0.510 Function used was FASTA [version 34.26.5 April 26, 2007]