hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-20105433/chunk_1/iprscan-20080501-20105433.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0202 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00735.9.fs Septin 398.5 7.1e-118 1 PF00735.9.ls Septin 400.3 2.7e-117 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00735.9.fs 1/1 120 392 .. 1 292 [] 398.5 7.1e-118 PF00735.9.ls 1/1 120 392 .. 1 292 [] 400.3 2.7e-117 Alignments of top-scoring domains: PF00735.9.fs: domain 1 of 1, from 120 to 392: score 398.5, E = 7.1e-118 *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt Gf+F++++VGe G+GK+Tl+NTLF+t ++ ++ KIAA0202 120 QGFSFNILCVGETGIGKSTLMNTLFNTTFETE-----------EAS- 154 kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI + v ++ ++ + E +v L+Lt++D+ GFGD+i+ ++ +PIv+YI KIAA0202 155 HHEACVRLR-PQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYI 203 deQfdqYLraEsrinRntkiv...DnRVHcCLYFIsPtGHgLkpLDvefM d Qf++YL++E +i+R ++++ +D+R+H+CLYFI+PtGH+Lk LD ++M KIAA0202 204 DAQFENYLQEELKIRR--SLFdyhDTRIHVCLYFITPTGHSLKSLDLVTM 251 KkLsekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdee KkL++kVN+IP+IAKADt + El+ fK +I+ +++ + IY+F P+++ KIAA0202 252 KKLDSKVNIIPIIAKADTISKSELHKFKIKIMGELVSNGVQIYQF-PTDD 300 edeDEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVE e +e + + + +PFA+vGS++e+ + VR+R+YPWGvV VE KIAA0202 301 EAV----AEINAVMNAHLPFAVVGSTEEVKV-GNKLVRARQYPWGVVQVE 345 NpsHCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<- N++HCDFvkLR +Lir +++DL e Th +YE YR+ kL+++g +d+ KIAA0202 346 NENHCDFVKLREMLIRVNMEDLREQTHSRHYELYRRCKLEEMG-FQDS 392 * KIAA0202 - - PF00735.9.ls: domain 1 of 1, from 120 to 392: score 400.3, E = 2.7e-117 *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt Gf+F++++VGe G+GK+Tl+NTLF+t ++ ++ KIAA0202 120 QGFSFNILCVGETGIGKSTLMNTLFNTTFETE-----------EAS- 154 kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI + v ++ ++ + E +v L+Lt++D+ GFGD+i+ ++ +PIv+YI KIAA0202 155 HHEACVRLR-PQTYDLQESNVQLKLTIVDAVGFGDQINKDESYRPIVDYI 203 deQfdqYLraEsrinRntkiv...DnRVHcCLYFIsPtGHgLkpLDvefM d Qf++YL++E +i+R ++++ +D+R+H+CLYFI+PtGH+Lk LD ++M KIAA0202 204 DAQFENYLQEELKIRR--SLFdyhDTRIHVCLYFITPTGHSLKSLDLVTM 251 KkLsekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdee KkL++kVN+IP+IAKADt + El+ fK +I+ +++ + IY+F P+++ KIAA0202 252 KKLDSKVNIIPIIAKADTISKSELHKFKIKIMGELVSNGVQIYQF-PTDD 300 edeDEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVE e +e + + + +PFA+vGS++e+ + VR+R+YPWGvV VE KIAA0202 301 EAV----AEINAVMNAHLPFAVVGSTEEVKV-GNKLVRARQYPWGVVQVE 345 NpsHCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<- N++HCDFvkLR +Lir +++DL e Th +YE YR+ kL+++g +d+ KIAA0202 346 NENHCDFVKLREMLIRVNMEDLREQTHSRHYELYRRCKLEEMG-FQDS 392 * KIAA0202 - - //