hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20254364/chunk_1/iprscan-20080501-20254364.nocrc
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Query sequence: KIAA0211
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                         155.5    1.3e-43  12
PF00096.16.fs Zinc finger, C2H2 type                         139.2      1e-38  13

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.ls   7/12    942   965 ..     1    24 []    24.3   0.0004
PF00096.16.fs  10/13   1063  1086 ..     1    24 []    23.6  0.00013
PF00096.16.ls   9/12   1063  1086 ..     1    24 []    25.5  0.00017
PF00096.16.ls  12/12   1203  1226 ..     1    24 []    18.4    0.023

Alignments of top-scoring domains:
PF00096.16.ls: domain 7 of 12, from 942 to 965: score 24.3, E = 0.0004
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      +kCp +C   F +k +L +H +++H   
    KIAA0211   942    FKCP-ECPLLFVQKPELMQHVKStH    965  

PF00096.16.fs: domain 10 of 13, from 1063 to 1086: score 23.6, E = 0.00013
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y C  +C +sF ++ +L++H+r +H   
    KIAA0211  1063    YPCR-QCEQSFHTPNSLRKHIRNnH    1086 

PF00096.16.ls: domain 9 of 12, from 1063 to 1086: score 25.5, E = 0.00017
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y C  +C +sF ++ +L++H+r +H   
    KIAA0211  1063    YPCR-QCEQSFHTPNSLRKHIRNnH    1086 

PF00096.16.ls: domain 12 of 12, from 1203 to 1226: score 18.4, E = 0.023
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                       +C   Cg ++++ s+L rHl + H   
    KIAA0211  1203    AQCL-LCGLCYTSASSLSRHLFIvH    1226 

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