hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20272557/chunk_1/iprscan-20080501-20272557.nocrc
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Query sequence: KIAA0212
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF01532.11.ls  Glycosyl hydrolase family 47             891.9   2.7e-265   1
PF01532.11.fs  Glycosyl hydrolase family 47             890.0     1e-264   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF01532.11.fs    1/1     146   595 ..     1   518 []   890.0   1e-264
PF01532.11.ls    1/1     146   595 ..     1   518 []   891.9 2.7e-265

Alignments of top-scoring domains:
PF01532.11.fs: domain 1 of 1, from 146 to 595: score 890.0, E = 1e-264
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrd.ndPsnlhssdifGesn
                      MF++++d+Y+ +A+++DEL+Pi+crgr++d++dPsnl+++d++G  n
    KIAA0212   146    MFVFGYDNYMAHAFPQDELNPIHCRGRGPDrGDPSNLNINDVLG--N 190  

                   lgaTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTI
                   +++T+vDaLDTL+iMG+  Ef++Av++v++t+sfd   +dstV+VFE TI
    KIAA0212   191 YSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFD---KDSTVQVFEATI 237  

                   RvlGGLLSAYaLtgdpkk.lgdvegsdydkmLLkKAvdlAdrLLpAF.nT
                   RvlG+LLSA+++++d+k+++gd++++dyd++LL++A+dlA+rLLpAF+nT
    KIAA0212   238 RVLGSLLSAHRIITDSKQpFGDMTIKDYDNELLYMAHDLAVRLLPAFeNT 287  

                   ptGIPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdpt
                   +tGIPy+rvNlk+gv++++++    ++++A++G+Ll EF++LSrL+Gd+t
    KIAA0212   288 KTGIPYPRVNLKTGVPPDTNN----ETCTAGAGSLLVEFGILSRLLGDST 333  

                   YekkarkardaLwklrpscekpeGLypnyinpqtGqqwtqshislGAggD
                   +e++ar+a++aLw+lr    + +GL++n++n+qtG +w +++++lGAg+D
    KIAA0212   334 FEWVARRAVKALWNLR---SNDTGLLGNVVNIQTG-HWVGKQSGLGAGLD 379  

                   GSfYEYLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfae
                    SfYEYLlK+yil+g++++  ++m+n+A+++i+++lrr+++    + ++e
    KIAA0212   380 -SFYEYLLKSYILFGEKED--LEMFNAAYQSIQNYLRRGRE----A-CNE 421  

                   lkngrfkilepkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeia
                    +++      p ++++++F+G+l+++++dsl+affpg  lqvl+gd+e+a
    KIAA0212   422 GEGDP-----PLYVNVNMFSGQLMNTWIDSLQAFFPG--LQVLIGDVEDA 464  

                   itcHemYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypL
                   i+ H++Y+++w+++G +p+r+n++++           a++vl    fypL
    KIAA0212   465 ICLHAFYYAIWKRYGALPERYNWQLQ-----------APDVL----FYPL 499  

                   RPEviEStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgg
                   RPE++ESty+LY+  aTk+p+      Y+++g++++q+leky++vkcG  
    KIAA0212   500 RPELVESTYLLYQ--ATKNPF------YLHVGMDILQSLEKYTKVKCG-- 539  

                   lssRyaglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalqvell
                       ya+l++V++ks+   eDrMESFfL+ET+KYLYLlFd+dn  +v++ 
    KIAA0212   540 ----YATLHHVIDKST---EDRMESFFLSETCKYLYLLFDEDN--PVHKS 580  

                   pldkctdevqgnwVFNTEAHPlpi<-*
                   +++         ++F+TE+H++++   
    KIAA0212   581 GTR---------YMFTTEGHIVSV    595  

PF01532.11.ls: domain 1 of 1, from 146 to 595: score 891.9, E = 2.7e-265
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrd.ndPsnlhssdifGesn
                      MF++++d+Y+ +A+++DEL+Pi+crgr++d++dPsnl+++d++G  n
    KIAA0212   146    MFVFGYDNYMAHAFPQDELNPIHCRGRGPDrGDPSNLNINDVLG--N 190  

                   lgaTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTI
                   +++T+vDaLDTL+iMG+  Ef++Av++v++t+sfd   +dstV+VFE TI
    KIAA0212   191 YSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFD---KDSTVQVFEATI 237  

                   RvlGGLLSAYaLtgdpkk.lgdvegsdydkmLLkKAvdlAdrLLpAF.nT
                   RvlG+LLSA+++++d+k+++gd++++dyd++LL++A+dlA+rLLpAF+nT
    KIAA0212   238 RVLGSLLSAHRIITDSKQpFGDMTIKDYDNELLYMAHDLAVRLLPAFeNT 287  

                   ptGIPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdpt
                   +tGIPy+rvNlk+gv++++++    ++++A++G+Ll EF++LSrL+Gd+t
    KIAA0212   288 KTGIPYPRVNLKTGVPPDTNN----ETCTAGAGSLLVEFGILSRLLGDST 333  

                   YekkarkardaLwklrpscekpeGLypnyinpqtGqqwtqshislGAggD
                   +e++ar+a++aLw+lr    + +GL++n++n+qtG +w +++++lGAg+D
    KIAA0212   334 FEWVARRAVKALWNLR---SNDTGLLGNVVNIQTG-HWVGKQSGLGAGLD 379  

                   GSfYEYLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfae
                    SfYEYLlK+yil+g++++  ++m+n+A+++i+++lrr+++    + ++e
    KIAA0212   380 -SFYEYLLKSYILFGEKED--LEMFNAAYQSIQNYLRRGRE----A-CNE 421  

                   lkngrfkilepkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeia
                    +++      p ++++++F+G+l+++++dsl+affpg  lqvl+gd+e+a
    KIAA0212   422 GEGDP-----PLYVNVNMFSGQLMNTWIDSLQAFFPG--LQVLIGDVEDA 464  

                   itcHemYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypL
                   i+ H++Y+++w+++G +p+r+n++++           a++vl    fypL
    KIAA0212   465 ICLHAFYYAIWKRYGALPERYNWQLQ-----------APDVL----FYPL 499  

                   RPEviEStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgg
                   RPE++ESty+LY+  aTk+p+      Y+++g++++q+leky++vkcG  
    KIAA0212   500 RPELVESTYLLYQ--ATKNPF------YLHVGMDILQSLEKYTKVKCG-- 539  

                   lssRyaglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalqvell
                       ya+l++V++ks+   eDrMESFfL+ET+KYLYLlFd+dn  +v++ 
    KIAA0212   540 ----YATLHHVIDKST---EDRMESFFLSETCKYLYLLFDEDN--PVHKS 580  

                   pldkctdevqgnwVFNTEAHPlpi<-*
                   +++         ++F+TE+H++++   
    KIAA0212   581 GTR---------YMFTTEGHIVSV    595  

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