hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-20290159/chunk_1/iprscan-20080501-20290159.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0213 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 266.7 4.3e-77 1 PF00069.15.fs Protein kinase domain 264.8 1.6e-76 1 PF07714.7.fs Protein tyrosine kinase 79.6 5.2e-23 2 PF07714.7.ls Protein tyrosine kinase 81.4 2.6e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 1361 1619 .. 1 287 [] 264.8 1.6e-76 PF07714.7.fs 1/2 1361 1501 .. 1 158 [. 49.7 2.4e-14 PF07714.7.ls 1/1 1361 1619 .. 1 272 [] 81.4 2.6e-21 PF00069.15.ls 1/1 1361 1619 .. 1 287 [] 266.7 4.3e-77 PF07714.7.fs 2/2 1527 1619 .. 183 272 .] 29.9 1.4e-08 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 1361 to 1619: score 264.8, E = 1.6e-76 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ++++ k+G+G +G+Vy ++ ++tg++ A+K+i+ + +++k k+ + KIAA0213 1361 WQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETAD 1407 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i ++HpN vr+++v + ++y+ +Eyc+ G L KIAA0213 1408 --ELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEG----TLE----- 1446 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ +l +e++++ + +Qi +++ LH++gi+HRD+K +NI+l + g KIAA0213 1447 EVSRLGL--QEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGL 1494 vdaflKiaDFGlAkkls....t.ssslttfvGTpwYmAPEvll..ggngy + K++DFG++ kl+++ +t +++ ++ GT YmAPEv+ + +g+g+ KIAA0213 1495 I----KLGDFGCSVKLKnnaqTmPGEVNSTLGTAAYMAPEVITraKGEGH 1540 gtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdsp g+++D+WSlG++++e++tGk P+ + +++ i + g + ++p KIAA0213 1541 GRAADIWSLGCVVIEMVTGKRPWHEY-----EHNFQIMYKVGMGHKPPIP 1585 ewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* e s +e+kd+++ cL+ DP+ R+ta ++l H ++ KIAA0213 1586 ERLS-------------PEGKDFLSHCLESDPKMRWTASQLLDHSFV 1619 PF07714.7.fs: domain 1 of 2, from 1361 to 1501: score 49.7, E = 2.4e-14 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLk.eigaseeei + g k+GeG++G+Vy ++ +t+ A K ++ + +++ KIAA0213 1361 WQRGNKIGEGQYGKVYTCISV----DTGELMAMKEIRfQ-PNDHKT- 1401 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++ E++i + +HpN+Vr+ Gv ++ +e +yi +Ey+ G KIAA0213 1402 -IKETADELKIFEGI-KHPNLVRYFGVELH-REE----MYIFMEYCDEGT 1444 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L + + L + + ++ Qi + + L+++++vHRD+ N+ + KIAA0213 1445 LEE---VS--RLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFL 1489 senlvVKIsDFG<-* ++++ +K +DFG KIAA0213 1490 TSSGLIKLGDFG 1501 PF07714.7.ls: domain 1 of 1, from 1361 to 1619: score 81.4, E = 2.6e-21 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLk.eigaseeei + g k+GeG++G+Vy ++ +t+ A K ++ + +++ KIAA0213 1361 WQRGNKIGEGQYGKVYTCISV----DTGELMAMKEIRfQ-PNDHKT- 1401 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++ E++i + +HpN+Vr+ Gv ++ +e +yi +Ey+ G KIAA0213 1402 -IKETADELKIFEGI-KHPNLVRYFGVELH-REE----MYIFMEYCDEGT 1444 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L + + L + + ++ Qi + + L+++++vHRD+ N+ + KIAA0213 1445 LEE---VS--RLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFL 1489 senlvVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPEslkygk... ++++ +K +DFG + + n ++ mAPE++ k+++ KIAA0213 1490 TSSGLIKLGDFGCSVKLKNNAQTmPGEVNSTLGTAAYMAPEVITRAKgeg 1539 FtskSDVWSFGVlLWEiftlGeqPFYpgm.sneevlellyedGyRLprPe + D+WS G++ E++t G+ P + + + n++++ ++ G+ p+Pe KIAA0213 1540 HGRAADIWSLGCVVIEMVT-GKRP-WHEYeHNFQIMYKV-GMGHKPPIPE 1586 nCPdelYdlMlqCWaedPedRPtFsel..veeL<-* ++e d + +C + dP++R t s+l ++++ KIAA0213 1587 RLSPEGKDFLSHCLESDPKMRWTASQLldHSFV 1619 PF00069.15.ls: domain 1 of 1, from 1361 to 1619: score 266.7, E = 4.3e-77 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ++++ k+G+G +G+Vy ++ ++tg++ A+K+i+ + +++k k+ + KIAA0213 1361 WQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETAD 1407 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i ++HpN vr+++v + ++y+ +Eyc+ G L KIAA0213 1408 --ELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEG----TLE----- 1446 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ +l +e++++ + +Qi +++ LH++gi+HRD+K +NI+l + g KIAA0213 1447 EVSRLGL--QEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGL 1494 vdaflKiaDFGlAkkls....t.ssslttfvGTpwYmAPEvll..ggngy + K++DFG++ kl+++ +t +++ ++ GT YmAPEv+ + +g+g+ KIAA0213 1495 I----KLGDFGCSVKLKnnaqTmPGEVNSTLGTAAYMAPEVITraKGEGH 1540 gtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdsp g+++D+WSlG++++e++tGk P+ + +++ i + g + ++p KIAA0213 1541 GRAADIWSLGCVVIEMVTGKRPWHEY-----EHNFQIMYKVGMGHKPPIP 1585 ewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* e s +e+kd+++ cL+ DP+ R+ta ++l H ++ KIAA0213 1586 ERLS-------------PEGKDFLSHCLESDPKMRWTASQLLDHSFV 1619 PF07714.7.fs: domain 2 of 2, from 1527 to 1619: score 29.9, E = 1.4e-08 *->mAPEslkygk...FtskSDVWSFGVlLWEiftlGeqPFYpgm.snee mAPE++ k+++ + D+WS G++ E++t G+ P + + + n++ KIAA0213 1527 MAPEVITRAKgegHGRAADIWSLGCVVIEMVT-GKRP-WHEYeHNFQ 1571 vlellyedGyRLprPenCPdelYdlMlqCWaedPedRPtFsel..veeL< ++ ++ G+ p+Pe ++e d + +C + dP++R t s+l ++++ KIAA0213 1572 IMYKV-GMGHKPPIPERLSPEGKDFLSHCLESDPKMRWTASQLldHSFV 1619 -* KIAA0213 - - //