HUGE

Gene/Protein Characteristic Table for KIAA0214

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00462
Accession No. :	D86987
Description :	Mitofusin-2.
HUGO Gene Name :	mitofusin 2 (MFN2)
Clone Name :	ha04778 [Vector Info]
Flexi ORF Clone :	pF1KSDA0214
Source :	Myeloblast cell line (KG-1)

Features of the cloned DNA sequence	Description

Length: 4550 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1954 bp

Genome contig ID gi89161185f_11862956
PolyA signal sequence
(AATAAA,-32)
+----*----+----*----+----*----+----
TAAAATAAAACCTAGTTGGAAATCCAAAAAAAAAC
Flanking genome sequence None

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 1 f 11962956 11996152 19 99.5 Terminal No-hit

Features of the protein sequence	Description

Length: 790 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
XP_514395	99.6	mitofusin 2 [Pa...	Pan troglodytes
O95140	100.0	Mitofusin-2; Tr...	Homo sapiens
AAD02058	99.9	CPRP1 [Homo sap...	Homo sapiens
BAE01725	99.5	unnamed protein...	Macaca fascicularis
CAH91261	99.3	hypothetical pr...	Pongo abelii

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR001401 132 292 PF00350 Dynamin

IPR006884 619 789 PF04799 Fzo-like conserved region

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001401	132	292	PF00350	Dynamin
IPR006884	619	789	PF04799	Fzo-like conserved region

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 654 VGGVVWKAVGWRLIALSFGLYGL 676 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	654	VGGVVWKAVGWRLIALSFGLYGL	676	PRIMARY	23

Expression profile	Description

: Northern blot Description

Northern blot	Description

RH mapping information	Description

Chromosome No.

: 1

Experimental conditions

Panel name	: Genebridge 4
Primer_f	: CCTGTTGTGTGGGGCGAAGTG
Primer_r	: TGCTGTGAAGTGGCCCCTGTC
PCR product length	: 104 bp
PCR conditions	: 95 °C15 sec66 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	1954 bp
Genome contig ID	gi89161185f_11862956
PolyA signal sequence (AATAAA,-32)	+--------+--------+----*----+---- TAAAATAAAACCTAGTTGGAAATCCAAAAAAAAAC
Flanking genome sequence	None

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	1	f	11962956	11996152	19	99.5	Terminal No-hit

Gene/Protein Characteristic Table for KIAA0214

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information