hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20321679/chunk_1/iprscan-20080501-20321679.nocrc
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Query sequence: KIAA0215
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00628.19.fs PHD-finger                                      62.1    1.6e-19   2
PF00628.19.ls PHD-finger                                      62.1    1.6e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00628.19.fs   1/2     236   284 ..     1    51 []    60.2  6.3e-19
PF00628.19.ls   1/1     236   284 ..     1    51 []    62.1  1.6e-15

Alignments of top-scoring domains:
PF00628.19.fs: domain 1 of 2, from 236 to 284: score 60.2, E = 6.3e-19
                   *->yCsvCgkeysdaggdllqCDgCdrwfHlaClgpplepeeipe..WyC
                      +C+vC++++s++g+d+++CD+C++++H+aC+g+      +pe++W+C
    KIAA0215   236    ICDVCRSPDSEEGNDMVFCDKCNVCVHQACYGIL----KVPEgsWLC 278  

                   peCkpk<-*
                   ++C+ +   
    KIAA0215   279 RSCVLG    284  

PF00628.19.ls: domain 1 of 1, from 236 to 284: score 62.1, E = 1.6e-15
                   *->yCsvCgkeysdaggdllqCDgCdrwfHlaClgpplepeeipe..WyC
                      +C+vC++++s++g+d+++CD+C++++H+aC+g+      +pe++W+C
    KIAA0215   236    ICDVCRSPDSEEGNDMVFCDKCNVCVHQACYGIL----KVPEgsWLC 278  

                   peCkpk<-*
                   ++C+ +   
    KIAA0215   279 RSCVLG    284  

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