hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20460638/chunk_1/iprscan-20080501-20460638.nocrc
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Query sequence: KIAA0223
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  234.4    7.5e-69   1
PF00620.17.ls RhoGAP domain                                  236.3    6.1e-68   1
PF00130.12.fs Phorbol esters/diacylglycerol binding domain    24.7    4.1e-06   1
PF00130.12.ls Phorbol esters/diacylglycerol binding domain    24.5    3.2e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00130.12.ls   1/1     732   779 ..     1    55 []    24.5  3.2e-05
PF00130.12.fs   1/1     735   779 ..     6    55 .]    24.7  4.1e-06
PF00620.17.fs   1/1     804   976 ..     1   155 []   234.4  7.5e-69
PF00620.17.ls   1/1     804   976 ..     1   155 []   236.3  6.1e-68

Alignments of top-scoring domains:
PF00130.12.ls: domain 1 of 1, from 732 to 779: score 24.5, E = 3.2e-05
                   *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek
                      H+ +     + p++C  C++ +    ++qG  C++C l +Hk+C e 
    KIAA0223   732    HRLRKL---RTPAKCRECNSYV----YFQGAECEECCLACHKKCLET 771  

                   VppeCgcg<-*
                   +++ Cg++   
    KIAA0223   772 LAIQCGHK    779  

PF00130.12.fs: domain 1 of 1, from 735 to 779: score 24.7, E = 4.1e-06
                   *->rwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChekVppeC
                      r  ++ p++C  C++ +    ++qG  C++C l +Hk+C e +++ C
    KIAA0223   735    R-KLRTPAKCRECNSYV----YFQGAECEECCLACHKKCLETLAIQC 776  

                   gcg<-*
                   g++   
    KIAA0223   777 GHK    779  

PF00620.17.fs: domain 1 of 1, from 804 to 976: score 234.4, E = 7.5e-69
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P+iv kC++++e+r+L+t+GIyRv+G k+r+++L++af++g++ +  
    KIAA0223   804    PFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELV-- 848  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.eaaaksedeeer..
                   +l++ ++h+++++LKl+LR+LPePL++f+ly+e++++ a +s ++e+  +
    KIAA0223   849 ELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVgL-AKDSLKAEAEak 897  

                   ...................lealrellrkLPpaNrdtLryLlahLnrVaq
                     +++++++++++        +lrellr LPp+Nr+ L+yLl+hL+r+ +
    KIAA0223   898 aasrgrqdgseseavavalAGRLRELLRDLPPENRASLQYLLRHLRRIVE 947  

                   nsevNkMtahNLAivFgPtLlrppdgdsad<-*
                    +++NkMt+ NL+ivFgPtLlrp+++ +a+   
    KIAA0223   948 VEQDNKMTPGNLGIVFGPTLLRPRPT-EAT    976  

PF00620.17.ls: domain 1 of 1, from 804 to 976: score 236.3, E = 6.1e-68
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P+iv kC++++e+r+L+t+GIyRv+G k+r+++L++af++g++ +  
    KIAA0223   804    PFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELV-- 848  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.eaaaksedeeer..
                   +l++ ++h+++++LKl+LR+LPePL++f+ly+e++++ a +s ++e+  +
    KIAA0223   849 ELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVgL-AKDSLKAEAEak 897  

                   ...................lealrellrkLPpaNrdtLryLlahLnrVaq
                     +++++++++++        +lrellr LPp+Nr+ L+yLl+hL+r+ +
    KIAA0223   898 aasrgrqdgseseavavalAGRLRELLRDLPPENRASLQYLLRHLRRIVE 947  

                   nsevNkMtahNLAivFgPtLlrppdgdsad<-*
                    +++NkMt+ NL+ivFgPtLlrp+++ +a+   
    KIAA0223   948 VEQDNKMTPGNLGIVFGPTLLRPRPT-EAT    976  

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