hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21174518/chunk_1/iprscan-20080501-21174518.nocrc
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Query sequence: KIAA0242
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00166                                                 135.5    5.6e-36   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00166    1/1     332   416 ..     1    97 []   135.5  5.6e-36

Alignments of top-scoring domains:
SM00166: domain 1 of 1, from 332 to 416: score 135.5, E = 5.6e-36
                   *->pkknpsisqcrlQiRlpdGsrlvrkFpssetLeevyefVeLqkseal
                      ++++++++++r+Q+RlpdGs+++++Fps+++Lee+++f+      a+
    KIAA0242   332    SYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFA------AQ 372  

                   tdgndpaevynadFtLnspfPrrtftkdDelKklleldellPsssLlLep
                   t+gn++++     F+L+++fPrr+ftk+D++Kkll+l el+Ps+s++L p
    KIAA0242   373 TVGNTYGN-----FSLATMFPRREFTKEDYKKKLLDL-ELAPSASVVLLP 416  

                   <-*
                      
    KIAA0242     -     -    

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