hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21192211/chunk_1/iprscan-20080501-21192211.nocrc
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Query sequence: KIAA0243
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04388.3.fs Hamartin protein                               528.1   8.6e-156   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04388.3.fs   1/1       1   254 [.   470   737 .]   528.1 8.6e-156

Alignments of top-scoring domains:
PF04388.3.fs: domain 1 of 1, from 1 to 254: score 528.1, E = 8.6e-156
                   *->easvEksvekPCdkelaaIskelseitGsvltaeaeevaarlgldnk
                      +as+E+s+ek  dke+aaIs+elseit    taeae+v++r+g+d++
    KIAA0243     1    LASEEDSIEK--DKEEAAISRELSEIT----TAEAEPVVPRGGFDSP 41   

                   fyrdslsllnLHmPSerkkHraaskaqgnsvnkeendssldkkaldeeKk
                   fyrdsl++      S+rk+H+aas++qg+svn+e+++ssldk+++d++K+
    KIAA0243    42 FYRDSLPG------SQRKTHSAASSSQGASVNPEPLHSSLDKLGPDTPKQ 85   

                   AwksedenPmgsadsspAgdrerqtsLETsiiteseckinsQrgvaFgsg
                   A++++d  P+gsad+spAgdre+qtsLETsi+t+s+cki+++++v+Fgsg
    KIAA0243    86 AFTPIDL-PCGSADESPAGDRECQTSLETSIFTPSPCKIPPPTRVGFGSG 134  

                   qlelklqlfEvkLkktaqhlvarskteeklqkvkgNpEeDsvpstskmev
                   q++++++lfEv+L+kta+h+v+r ktee+l+k+kgN+EeD+vpsts+mev
    KIAA0243   135 QPPPYDHLFEVALPKTAHHFVIR-KTEELLKKAKGNTEEDGVPSTSPMEV 183  

                   ldlLLeqseaasdkeeneLllpeksvdklekeglklsdeietlrdqLllL
                   ld+L++q+++a++ke+n+L+lp+ksvd+++++g+++sdei+tlrdqLllL
    KIAA0243   184 LDRLIQQGADAHSKELNKLPLPSKSVDWTHFGGSPPSDEIRTLRDQLLLL 233  

                   HNqLlYErfkrdlhalRNRRL<-*
                   HNqLlYErfkr++halRNRRL   
    KIAA0243   234 HNQLLYERFKRQQHALRNRRL    254  

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